RNA–Protein interactions for RNA: ENST00000640921.1

ELP4-227, Transcript of elongator acetyltransferase complex subunit 4, humanhuman

TSL 2

Gene ELP4, Length 2,721 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELP4-227ENST00000640921 NISCHQ9Y2I1 1504 aa20.89■□□□□ 0.93
ELP4-227ENST00000640921 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
ELP4-227ENST00000640921 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
ELP4-227ENST00000640921 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
ELP4-227ENST00000640921 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
ELP4-227ENST00000640921 ABCC9O60706 1549 aa17.13■□□□□ 0.33
ELP4-227ENST00000640921 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
ELP4-227ENST00000640921 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
ELP4-227ENST00000640921 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
ELP4-227ENST00000640921 MYO15BQ96JP2 1530 aa16.69■□□□□ 0.26
ELP4-227ENST00000640921 NACADO15069 1562 aa16.67■□□□□ 0.26
ELP4-227ENST00000640921 RB1CC1Q8TDY2 1594 aa16.53■□□□□ 0.24
ELP4-227ENST00000640921 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.21
ELP4-227ENST00000640921 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
ELP4-227ENST00000640921 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
ELP4-227ENST00000640921 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
ELP4-227ENST00000640921 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
ELP4-227ENST00000640921 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
ELP4-227ENST00000640921 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
ELP4-227ENST00000640921 WIZO95785 1651 aa16.17■□□□□ 0.18
ELP4-227ENST00000640921 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
ELP4-227ENST00000640921 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
ELP4-227ENST00000640921 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
ELP4-227ENST00000640921 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
ELP4-227ENST00000640921 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
ELP4-227ENST00000640921 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
ELP4-227ENST00000640921 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
ELP4-227ENST00000640921 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
ELP4-227ENST00000640921 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
ELP4-227ENST00000640921 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
ELP4-227ENST00000640921 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.11
ELP4-227ENST00000640921 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
ELP4-227ENST00000640921 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
ELP4-227ENST00000640921 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
ELP4-227ENST00000640921 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
ELP4-227ENST00000640921 HRCP23327 699 aa15.62■□□□□ 0.09
ELP4-227ENST00000640921 PCGF6Q9BYE7 350 aa15.45■□□□□ 0.06
ELP4-227ENST00000640921 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
ELP4-227ENST00000640921 SOGA1O94964 1423 aa15.43■□□□□ 0.06
ELP4-227ENST00000640921 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
ELP4-227ENST00000640921 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
ELP4-227ENST00000640921 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
ELP4-227ENST00000640921 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
ELP4-227ENST00000640921 CC2D2AQ9P2K1 1620 aa15.37■□□□□ 0.05
ELP4-227ENST00000640921 PPARGC1BQ86YN6 1023 aaKnown RBP15.3■□□□□ 0.04
ELP4-227ENST00000640921 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
ELP4-227ENST00000640921 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
ELP4-227ENST00000640921 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
ELP4-227ENST00000640921 TRIM26Q12899 539 aaPredicted RBP15.23■□□□□ 0.03
ELP4-227ENST00000640921 CFTRP13569 1480 aa15.21■□□□□ 0.03
ELP4-227ENST00000640921 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
ELP4-227ENST00000640921 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
ELP4-227ENST00000640921 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
ELP4-227ENST00000640921 CUX1P39880 1505 aa15.15■□□□□ 0.02
ELP4-227ENST00000640921 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
ELP4-227ENST00000640921 EEA1Q15075 1411 aa15.14■□□□□ 0.01
ELP4-227ENST00000640921 NESP48681 1621 aa15.13■□□□□ 0.01
ELP4-227ENST00000640921 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
ELP4-227ENST00000640921 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
ELP4-227ENST00000640921 GOLGA3Q08378 1498 aa15.09■□□□□ 0.01
ELP4-227ENST00000640921 TNIKQ9UKE5 1360 aa15.07■□□□□ 0
ELP4-227ENST00000640921 RAPGEF2Q9Y4G8 1499 aa15.06■□□□□ 0
ELP4-227ENST00000640921 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
ELP4-227ENST00000640921 PRDM2Q13029 1718 aa15.05■□□□□ -0
ELP4-227ENST00000640921 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
ELP4-227ENST00000640921 FANCD2Q9BXW9 1451 aa15.02■□□□□ -0
ELP4-227ENST00000640921 KIF21BO75037 1637 aa14.99□□□□□ -0.01
ELP4-227ENST00000640921 FGD5Q6ZNL6 1462 aa14.97□□□□□ -0.01
ELP4-227ENST00000640921 KIF27Q86VH2 1401 aa14.96□□□□□ -0.01
ELP4-227ENST00000640921 CUX2O14529 1486 aa14.96□□□□□ -0.02
ELP4-227ENST00000640921 CLIP1P30622 1438 aa14.93□□□□□ -0.02
ELP4-227ENST00000640921 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
ELP4-227ENST00000640921 PRXQ9BXM0 1461 aa14.9□□□□□ -0.02
ELP4-227ENST00000640921 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
ELP4-227ENST00000640921 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
ELP4-227ENST00000640921 IGF1RP08069 1367 aa14.85□□□□□ -0.03
ELP4-227ENST00000640921 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
ELP4-227ENST00000640921 DNMBPQ6XZF7 1577 aa14.84□□□□□ -0.03
ELP4-227ENST00000640921 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.03
ELP4-227ENST00000640921 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
ELP4-227ENST00000640921 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
ELP4-227ENST00000640921 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
ELP4-227ENST00000640921 CARMIL1Q5VZK9 1371 aa14.79□□□□□ -0.04
ELP4-227ENST00000640921 VPS8Q8N3P4 1428 aa14.78□□□□□ -0.04
ELP4-227ENST00000640921 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
ELP4-227ENST00000640921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
ELP4-227ENST00000640921 APLP2Q06481 763 aa14.76□□□□□ -0.05
ELP4-227ENST00000640921 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
ELP4-227ENST00000640921 P3H3Q8IVL6 736 aa14.73□□□□□ -0.05
ELP4-227ENST00000640921 ABCA10Q8WWZ4 1543 aa14.73□□□□□ -0.05
ELP4-227ENST00000640921 ARHGAP35Q9NRY4 1499 aa14.69□□□□□ -0.06
ELP4-227ENST00000640921 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
ELP4-227ENST00000640921 KANK4Q5T7N3 995 aaPredicted RBP14.66□□□□□ -0.06
ELP4-227ENST00000640921 CCER1Q8TC90 406 aaPredicted RBP14.64□□□□□ -0.07
ELP4-227ENST00000640921 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
ELP4-227ENST00000640921 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
ELP4-227ENST00000640921 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
ELP4-227ENST00000640921 AQRO60306 1485 aaKnown RBP eCLIP14.61□□□□□ -0.07
ELP4-227ENST00000640921 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
ELP4-227ENST00000640921 ERCC6Q03468 1493 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms