RNA–Protein interactions for RNA: ENST00000639414.1

PRICKLE1-210, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-210ENST00000639414 AEBP2Q6ZN18 517 aaPredicted RBP30.64■■■□□ 2.5
PRICKLE1-210ENST00000639414 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
PRICKLE1-210ENST00000639414 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
PRICKLE1-210ENST00000639414 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
PRICKLE1-210ENST00000639414 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
PRICKLE1-210ENST00000639414 ABCC9O60706 1549 aa25.21■■□□□ 1.63
PRICKLE1-210ENST00000639414 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
PRICKLE1-210ENST00000639414 FOXD1Q16676 465 aa24.24■■□□□ 1.47
PRICKLE1-210ENST00000639414 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
PRICKLE1-210ENST00000639414 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
PRICKLE1-210ENST00000639414 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
PRICKLE1-210ENST00000639414 NACADO15069 1562 aa23.57■■□□□ 1.36
PRICKLE1-210ENST00000639414 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
PRICKLE1-210ENST00000639414 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
PRICKLE1-210ENST00000639414 UNC13AQ9UPW8 1703 aa23.31■■□□□ 1.32
PRICKLE1-210ENST00000639414 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
PRICKLE1-210ENST00000639414 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
PRICKLE1-210ENST00000639414 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
PRICKLE1-210ENST00000639414 ADRA2BP18089 450 aa22.9■■□□□ 1.26
PRICKLE1-210ENST00000639414 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
PRICKLE1-210ENST00000639414 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
PRICKLE1-210ENST00000639414 CECR2Q9BXF3 1484 aa22.75■■□□□ 1.23
PRICKLE1-210ENST00000639414 PIAS4Q8N2W9 510 aaPredicted RBP22.74■■□□□ 1.23
PRICKLE1-210ENST00000639414 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
PRICKLE1-210ENST00000639414 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
PRICKLE1-210ENST00000639414 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
PRICKLE1-210ENST00000639414 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
PRICKLE1-210ENST00000639414 MSH5O43196 834 aa22.55■■□□□ 1.2
PRICKLE1-210ENST00000639414 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
PRICKLE1-210ENST00000639414 CUX2O14529 1486 aa21.89■■□□□ 1.09
PRICKLE1-210ENST00000639414 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
PRICKLE1-210ENST00000639414 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
PRICKLE1-210ENST00000639414 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
PRICKLE1-210ENST00000639414 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
PRICKLE1-210ENST00000639414 NESP48681 1621 aa21.56■■□□□ 1.04
PRICKLE1-210ENST00000639414 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
PRICKLE1-210ENST00000639414 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
PRICKLE1-210ENST00000639414 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
PRICKLE1-210ENST00000639414 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.02
PRICKLE1-210ENST00000639414 BAZ1AQ9NRL2 1556 aaPredicted RBP21.35■■□□□ 1.01
PRICKLE1-210ENST00000639414 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
PRICKLE1-210ENST00000639414 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
PRICKLE1-210ENST00000639414 POTEDQ86YR6 584 aa21.32■■□□□ 1
PRICKLE1-210ENST00000639414 KIF21AQ7Z4S6 1674 aa21.25■□□□□ 0.99
PRICKLE1-210ENST00000639414 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
PRICKLE1-210ENST00000639414 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
PRICKLE1-210ENST00000639414 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
PRICKLE1-210ENST00000639414 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
PRICKLE1-210ENST00000639414 MRC2Q9UBG0 1479 aa21.06■□□□□ 0.96
PRICKLE1-210ENST00000639414 WDR62O43379 1518 aa21.03■□□□□ 0.96
PRICKLE1-210ENST00000639414 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
PRICKLE1-210ENST00000639414 WIZO95785 1651 aa20.91■□□□□ 0.94
PRICKLE1-210ENST00000639414 MAPK8IP2Q13387 824 aaPredicted RBP20.9■□□□□ 0.94
PRICKLE1-210ENST00000639414 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
PRICKLE1-210ENST00000639414 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
PRICKLE1-210ENST00000639414 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
PRICKLE1-210ENST00000639414 PPP4R3CPQ6ZMV5 832 aa20.83■□□□□ 0.93
PRICKLE1-210ENST00000639414 CFTRP13569 1480 aa20.78■□□□□ 0.92
PRICKLE1-210ENST00000639414 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
PRICKLE1-210ENST00000639414 URB2Q14146 1524 aaKnown RBP20.71■□□□□ 0.91
PRICKLE1-210ENST00000639414 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
PRICKLE1-210ENST00000639414 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
PRICKLE1-210ENST00000639414 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
PRICKLE1-210ENST00000639414 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
PRICKLE1-210ENST00000639414 TOP2AP11388 1531 aaKnown RBP20.59■□□□□ 0.89
PRICKLE1-210ENST00000639414 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
PRICKLE1-210ENST00000639414 PRDM2Q13029 1718 aa20.51■□□□□ 0.87
PRICKLE1-210ENST00000639414 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
PRICKLE1-210ENST00000639414 ARHGEF11O15085 1522 aa20.49■□□□□ 0.87
PRICKLE1-210ENST00000639414 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
PRICKLE1-210ENST00000639414 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
PRICKLE1-210ENST00000639414 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
PRICKLE1-210ENST00000639414 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
PRICKLE1-210ENST00000639414 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
PRICKLE1-210ENST00000639414 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
PRICKLE1-210ENST00000639414 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.84
PRICKLE1-210ENST00000639414 CHD1O14646 1710 aa20.29■□□□□ 0.84
PRICKLE1-210ENST00000639414 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
PRICKLE1-210ENST00000639414 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
PRICKLE1-210ENST00000639414 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
PRICKLE1-210ENST00000639414 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
PRICKLE1-210ENST00000639414 FBLN2P98095 1184 aa20.21■□□□□ 0.83
PRICKLE1-210ENST00000639414 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
PRICKLE1-210ENST00000639414 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
PRICKLE1-210ENST00000639414 HOXD11P31277 338 aaPredicted RBP20.15■□□□□ 0.82
PRICKLE1-210ENST00000639414 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
PRICKLE1-210ENST00000639414 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
PRICKLE1-210ENST00000639414 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
PRICKLE1-210ENST00000639414 SOGA1O94964 1423 aa20.09■□□□□ 0.81
PRICKLE1-210ENST00000639414 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
PRICKLE1-210ENST00000639414 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
PRICKLE1-210ENST00000639414 CHMP7Q8WUX9 453 aaPredicted RBP20.01■□□□□ 0.79
PRICKLE1-210ENST00000639414 WDR97A6NE52 1622 aa20.01■□□□□ 0.79
PRICKLE1-210ENST00000639414 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
PRICKLE1-210ENST00000639414 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
PRICKLE1-210ENST00000639414 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
PRICKLE1-210ENST00000639414 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
PRICKLE1-210ENST00000639414 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
PRICKLE1-210ENST00000639414 CUX1P39880 1505 aa19.92■□□□□ 0.78
PRICKLE1-210ENST00000639414 NPM3O75607 178 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms