RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 AEBP2Q6ZN18 517 aaPredicted RBP10.4□□□□□ -0.74
CCDC7-213ENST00000639290 DNAJC5Q9H3Z4 198 aa10.24□□□□□ -0.77
CCDC7-213ENST00000639290 DNAJC5BQ9UF47 199 aa10.13□□□□□ -0.79
CCDC7-213ENST00000639290 ABCC9O60706 1549 aa10.02□□□□□ -0.81
CCDC7-213ENST00000639290 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
CCDC7-213ENST00000639290 CHIC1Q5VXU3 224 aa9.96□□□□□ -0.81
CCDC7-213ENST00000639290 CCDC180Q9P1Z9 1646 aa9.52□□□□□ -0.89
CCDC7-213ENST00000639290 RB1CC1Q8TDY2 1594 aa9.41□□□□□ -0.9
CCDC7-213ENST00000639290 POTEDQ86YR6 584 aa9.41□□□□□ -0.9
CCDC7-213ENST00000639290 CUX2O14529 1486 aa9.36□□□□□ -0.91
CCDC7-213ENST00000639290 CECR2Q9BXF3 1484 aa9.25□□□□□ -0.93
CCDC7-213ENST00000639290 SHROOM4Q9ULL8 1493 aa9.23□□□□□ -0.93
CCDC7-213ENST00000639290 NACADO15069 1562 aa9.17□□□□□ -0.94
CCDC7-213ENST00000639290 CC2D2AQ9P2K1 1620 aa9.15□□□□□ -0.94
CCDC7-213ENST00000639290 TRIM41Q8WV44 630 aa9.11□□□□□ -0.95
CCDC7-213ENST00000639290 UNC13AQ9UPW8 1703 aa9.07□□□□□ -0.96
CCDC7-213ENST00000639290 BICRAQ9NZM4 1560 aa9.07□□□□□ -0.96
CCDC7-213ENST00000639290 PABPN1Q86U42 306 aaKnown RBP eCLIP9.02□□□□□ -0.96
CCDC7-213ENST00000639290 SENP3Q9H4L4 574 aaPredicted RBP8.98□□□□□ -0.97
CCDC7-213ENST00000639290 EIF4G1Q04637 1599 aaKnown RBP8.93□□□□□ -0.98
CCDC7-213ENST00000639290 MYO15BQ96JP2 1530 aa8.88□□□□□ -0.99
CCDC7-213ENST00000639290 ERCC6Q03468 1493 aa8.81□□□□□ -1
CCDC7-213ENST00000639290 PHF23Q9BUL5 403 aaPredicted RBP8.81□□□□□ -1
CCDC7-213ENST00000639290 ILDR1Q86SU0 546 aaPredicted RBP8.79□□□□□ -1
CCDC7-213ENST00000639290 THOC2Q8NI27 1593 aaKnown RBP8.66□□□□□ -1.02
CCDC7-213ENST00000639290 BAZ1AQ9NRL2 1556 aaPredicted RBP8.59□□□□□ -1.03
CCDC7-213ENST00000639290 RIMBP3CA6NJZ7 1639 aa8.59□□□□□ -1.03
CCDC7-213ENST00000639290 RIMBP3BA6NNM3 1639 aa8.59□□□□□ -1.03
CCDC7-213ENST00000639290 RIMBP3Q9UFD9 1639 aa8.59□□□□□ -1.03
CCDC7-213ENST00000639290 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
CCDC7-213ENST00000639290 ARHGEF11O15085 1522 aa8.46□□□□□ -1.06
CCDC7-213ENST00000639290 TRHP20396 242 aaPredicted RBP8.44□□□□□ -1.06
CCDC7-213ENST00000639290 ERCC6L2Q5T890 1561 aa8.42□□□□□ -1.06
CCDC7-213ENST00000639290 LAMC3Q9Y6N6 1575 aa8.41□□□□□ -1.06
CCDC7-213ENST00000639290 NCAPD3P42695 1498 aa8.41□□□□□ -1.06
CCDC7-213ENST00000639290 SOCS7O14512 581 aa8.4□□□□□ -1.06
CCDC7-213ENST00000639290 LMTK3Q96Q04 1460 aa8.37□□□□□ -1.07
CCDC7-213ENST00000639290 WDR62O43379 1518 aa8.36□□□□□ -1.07
CCDC7-213ENST00000639290 FBXO41Q8TF61 875 aa8.35□□□□□ -1.07
CCDC7-213ENST00000639290 SCRIBQ14160 1630 aa8.35□□□□□ -1.07
CCDC7-213ENST00000639290 DCAF1Q9Y4B6 1507 aa8.35□□□□□ -1.07
CCDC7-213ENST00000639290 PDS5BQ9NTI5 1447 aa8.33□□□□□ -1.08
CCDC7-213ENST00000639290 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
CCDC7-213ENST00000639290 SMARCA2P51531 1590 aa8.31□□□□□ -1.08
CCDC7-213ENST00000639290 MRC2Q9UBG0 1479 aa8.31□□□□□ -1.08
CCDC7-213ENST00000639290 KIF21AQ7Z4S6 1674 aa8.3□□□□□ -1.08
CCDC7-213ENST00000639290 NESP48681 1621 aa8.3□□□□□ -1.08
CCDC7-213ENST00000639290 FOXD1Q16676 465 aa8.29□□□□□ -1.08
CCDC7-213ENST00000639290 ARAP1Q96P48 1450 aa8.28□□□□□ -1.08
CCDC7-213ENST00000639290 DCAF8L2P0C7V8 631 aa8.28□□□□□ -1.08
CCDC7-213ENST00000639290 RSF1Q96T23 1441 aaPredicted RBP8.27□□□□□ -1.09
CCDC7-213ENST00000639290 CYB5RLQ6IPT4 315 aa8.23□□□□□ -1.09
CCDC7-213ENST00000639290 ATAD2BQ9ULI0 1458 aa8.15□□□□□ -1.1
CCDC7-213ENST00000639290 HECW2Q9P2P5 1572 aa8.13□□□□□ -1.11
CCDC7-213ENST00000639290 KDM4FA0A1W2PPD8 638 aa8.1□□□□□ -1.11
CCDC7-213ENST00000639290 ILDR2Q71H61 639 aa8.06□□□□□ -1.12
CCDC7-213ENST00000639290 CEP164Q9UPV0 1460 aa8.04□□□□□ -1.12
CCDC7-213ENST00000639290 ZCCHC6Q5VYS8 1495 aaKnown RBP8.03□□□□□ -1.12
CCDC7-213ENST00000639290 DISP3Q9P2K9 1392 aa8.03□□□□□ -1.12
CCDC7-213ENST00000639290 CADPSQ9ULU8 1353 aa8.02□□□□□ -1.13
CCDC7-213ENST00000639290 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
CCDC7-213ENST00000639290 PEG3Q9GZU2 1588 aa8.02□□□□□ -1.13
CCDC7-213ENST00000639290 MSH5O43196 834 aa8.01□□□□□ -1.13
CCDC7-213ENST00000639290 BAZ1BQ9UIG0 1483 aaKnown RBP8.01□□□□□ -1.13
CCDC7-213ENST00000639290 PLPPR3Q6T4P5 718 aa8.01□□□□□ -1.13
CCDC7-213ENST00000639290 IFT140Q96RY7 1462 aa7.98□□□□□ -1.13
CCDC7-213ENST00000639290 CHD1O14646 1710 aa7.98□□□□□ -1.13
CCDC7-213ENST00000639290 CLASP1Q7Z460 1538 aa7.98□□□□□ -1.13
CCDC7-213ENST00000639290 SYNJ2O15056 1496 aa7.98□□□□□ -1.13
CCDC7-213ENST00000639290 KIF13AQ9H1H9 1805 aa7.96□□□□□ -1.14
CCDC7-213ENST00000639290 SMARCA4P51532 1647 aa7.94□□□□□ -1.14
CCDC7-213ENST00000639290 KDM6BO15054 1643 aa7.92□□□□□ -1.14
CCDC7-213ENST00000639290 ADGRL1O94910 1474 aa7.92□□□□□ -1.14
CCDC7-213ENST00000639290 FANCD2Q9BXW9 1451 aa7.9□□□□□ -1.14
CCDC7-213ENST00000639290 SYNJ1O43426 1573 aa7.89□□□□□ -1.15
CCDC7-213ENST00000639290 EIF4G3O43432 1585 aaKnown RBP7.89□□□□□ -1.15
CCDC7-213ENST00000639290 URB2Q14146 1524 aaKnown RBP7.87□□□□□ -1.15
CCDC7-213ENST00000639290 GAPVD1Q14C86 1478 aa7.87□□□□□ -1.15
CCDC7-213ENST00000639290 TOP2BQ02880 1626 aa7.86□□□□□ -1.15
CCDC7-213ENST00000639290 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
CCDC7-213ENST00000639290 ZNF608Q9ULD9 1512 aaPredicted RBP7.84□□□□□ -1.15
CCDC7-213ENST00000639290 ABCC10Q5T3U5 1492 aa7.82□□□□□ -1.16
CCDC7-213ENST00000639290 PIAS4Q8N2W9 510 aaPredicted RBP7.8□□□□□ -1.16
CCDC7-213ENST00000639290 MAPKBP1O60336 1514 aa7.78□□□□□ -1.16
CCDC7-213ENST00000639290 ABCC8Q09428 1581 aa7.77□□□□□ -1.16
CCDC7-213ENST00000639290 CFTRP13569 1480 aa7.77□□□□□ -1.17
CCDC7-213ENST00000639290 DIP2BQ9P265 1576 aa7.76□□□□□ -1.17
CCDC7-213ENST00000639290 PRDM2Q13029 1718 aa7.74□□□□□ -1.17
CCDC7-213ENST00000639290 CERKQ8TCT0 537 aa7.73□□□□□ -1.17
CCDC7-213ENST00000639290 MAGI1Q96QZ7 1491 aaPredicted RBP7.72□□□□□ -1.17
CCDC7-213ENST00000639290 PPP6R1Q9UPN7 881 aa7.72□□□□□ -1.17
CCDC7-213ENST00000639290 ADRA2BP18089 450 aa7.72□□□□□ -1.17
CCDC7-213ENST00000639290 TARBP1Q13395 1621 aaKnown RBP7.71□□□□□ -1.18
CCDC7-213ENST00000639290 IQSEC2Q5JU85 1478 aa7.69□□□□□ -1.18
CCDC7-213ENST00000639290 PCF11O94913 1555 aaKnown RBP7.66□□□□□ -1.18
CCDC7-213ENST00000639290 TOPBP1Q92547 1522 aa7.66□□□□□ -1.18
CCDC7-213ENST00000639290 FAM69CQ0P6D2 419 aa7.66□□□□□ -1.18
CCDC7-213ENST00000639290 SNAPC4Q5SXM2 1469 aa7.63□□□□□ -1.19
CCDC7-213ENST00000639290 DNMBPQ6XZF7 1577 aa7.63□□□□□ -1.19
CCDC7-213ENST00000639290 SHROOM2Q13796 1616 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms