RNA–Protein interactions for RNA: ENST00000639113.1

PRICKLE2-207, Transcript of prickle planar cell polarity protein 2, humanhuman

TSL 2

Gene PRICKLE2, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE2-207ENST00000639113 NISCHQ9Y2I1 1504 aa17.91■□□□□ 0.46
PRICKLE2-207ENST00000639113 ABCC9O60706 1549 aa17.35■□□□□ 0.37
PRICKLE2-207ENST00000639113 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
PRICKLE2-207ENST00000639113 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
PRICKLE2-207ENST00000639113 DNAJC5Q9H3Z4 198 aa16.27■□□□□ 0.2
PRICKLE2-207ENST00000639113 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRICKLE2-207ENST00000639113 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
PRICKLE2-207ENST00000639113 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
PRICKLE2-207ENST00000639113 CECR2Q9BXF3 1484 aa15.69■□□□□ 0.1
PRICKLE2-207ENST00000639113 NACADO15069 1562 aa15.69■□□□□ 0.1
PRICKLE2-207ENST00000639113 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.09
PRICKLE2-207ENST00000639113 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
PRICKLE2-207ENST00000639113 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
PRICKLE2-207ENST00000639113 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
PRICKLE2-207ENST00000639113 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
PRICKLE2-207ENST00000639113 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
PRICKLE2-207ENST00000639113 CUX2O14529 1486 aa15.2■□□□□ 0.02
PRICKLE2-207ENST00000639113 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
PRICKLE2-207ENST00000639113 ERCC6Q03468 1493 aa15.02■□□□□ -0
PRICKLE2-207ENST00000639113 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
PRICKLE2-207ENST00000639113 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
PRICKLE2-207ENST00000639113 NESP48681 1621 aa14.65□□□□□ -0.06
PRICKLE2-207ENST00000639113 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
PRICKLE2-207ENST00000639113 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
PRICKLE2-207ENST00000639113 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
PRICKLE2-207ENST00000639113 THOC2Q8NI27 1593 aaKnown RBP14.55□□□□□ -0.08
PRICKLE2-207ENST00000639113 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
PRICKLE2-207ENST00000639113 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
PRICKLE2-207ENST00000639113 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
PRICKLE2-207ENST00000639113 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
PRICKLE2-207ENST00000639113 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
PRICKLE2-207ENST00000639113 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
PRICKLE2-207ENST00000639113 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
PRICKLE2-207ENST00000639113 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
PRICKLE2-207ENST00000639113 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
PRICKLE2-207ENST00000639113 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
PRICKLE2-207ENST00000639113 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
PRICKLE2-207ENST00000639113 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
PRICKLE2-207ENST00000639113 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
PRICKLE2-207ENST00000639113 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
PRICKLE2-207ENST00000639113 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
PRICKLE2-207ENST00000639113 WDR62O43379 1518 aa14.18□□□□□ -0.14
PRICKLE2-207ENST00000639113 ARHGEF11O15085 1522 aa14.17□□□□□ -0.14
PRICKLE2-207ENST00000639113 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
PRICKLE2-207ENST00000639113 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
PRICKLE2-207ENST00000639113 CADPSQ9ULU8 1353 aa14.1□□□□□ -0.15
PRICKLE2-207ENST00000639113 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
PRICKLE2-207ENST00000639113 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
PRICKLE2-207ENST00000639113 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
PRICKLE2-207ENST00000639113 PEG3Q9GZU2 1588 aa13.93□□□□□ -0.18
PRICKLE2-207ENST00000639113 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
PRICKLE2-207ENST00000639113 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
PRICKLE2-207ENST00000639113 FBLN2P98095 1184 aa13.83□□□□□ -0.2
PRICKLE2-207ENST00000639113 MROH2BQ7Z745 1585 aa13.82□□□□□ -0.2
PRICKLE2-207ENST00000639113 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
PRICKLE2-207ENST00000639113 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
PRICKLE2-207ENST00000639113 CFTRP13569 1480 aa13.74□□□□□ -0.21
PRICKLE2-207ENST00000639113 CHD1O14646 1710 aa13.67□□□□□ -0.22
PRICKLE2-207ENST00000639113 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRICKLE2-207ENST00000639113 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
PRICKLE2-207ENST00000639113 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
PRICKLE2-207ENST00000639113 WIZO95785 1651 aa13.57□□□□□ -0.24
PRICKLE2-207ENST00000639113 TOPBP1Q92547 1522 aa13.56□□□□□ -0.24
PRICKLE2-207ENST00000639113 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
PRICKLE2-207ENST00000639113 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
PRICKLE2-207ENST00000639113 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
PRICKLE2-207ENST00000639113 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
PRICKLE2-207ENST00000639113 SYNJ1O43426 1573 aa13.45□□□□□ -0.26
PRICKLE2-207ENST00000639113 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
PRICKLE2-207ENST00000639113 TARBP1Q13395 1621 aaKnown RBP13.44□□□□□ -0.26
PRICKLE2-207ENST00000639113 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
PRICKLE2-207ENST00000639113 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
PRICKLE2-207ENST00000639113 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
PRICKLE2-207ENST00000639113 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
PRICKLE2-207ENST00000639113 FAM69CQ0P6D2 419 aa13.38□□□□□ -0.27
PRICKLE2-207ENST00000639113 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
PRICKLE2-207ENST00000639113 SOGA1O94964 1423 aa13.35□□□□□ -0.27
PRICKLE2-207ENST00000639113 ERCC6L2Q5T890 1561 aa13.33□□□□□ -0.28
PRICKLE2-207ENST00000639113 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
PRICKLE2-207ENST00000639113 TOP2AP11388 1531 aaKnown RBP13.33□□□□□ -0.28
PRICKLE2-207ENST00000639113 KIF13AQ9H1H9 1805 aa13.32□□□□□ -0.28
PRICKLE2-207ENST00000639113 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
PRICKLE2-207ENST00000639113 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
PRICKLE2-207ENST00000639113 LMTK3Q96Q04 1460 aa13.31□□□□□ -0.28
PRICKLE2-207ENST00000639113 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
PRICKLE2-207ENST00000639113 GRIN2BQ13224 1484 aa13.28□□□□□ -0.28
PRICKLE2-207ENST00000639113 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
PRICKLE2-207ENST00000639113 KDM6BO15054 1643 aa13.26□□□□□ -0.29
PRICKLE2-207ENST00000639113 ADGRL1O94910 1474 aa13.25□□□□□ -0.29
PRICKLE2-207ENST00000639113 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
PRICKLE2-207ENST00000639113 SOCS7O14512 581 aa13.24□□□□□ -0.29
PRICKLE2-207ENST00000639113 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRICKLE2-207ENST00000639113 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
PRICKLE2-207ENST00000639113 CEP170Q5SW79 1584 aa13.19□□□□□ -0.3
PRICKLE2-207ENST00000639113 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
PRICKLE2-207ENST00000639113 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
PRICKLE2-207ENST00000639113 DIP2BQ9P265 1576 aa13.14□□□□□ -0.31
PRICKLE2-207ENST00000639113 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
PRICKLE2-207ENST00000639113 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
PRICKLE2-207ENST00000639113 TSPOAP1O95153 1857 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms