RNA–Protein interactions for RNA: ENST00000639088.1

SLC35A3-214, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-214ENST00000639088 NISCHQ9Y2I1 1504 aa47.23■■■■■ 5.15
SLC35A3-214ENST00000639088 CCDC180Q9P1Z9 1646 aa41.81■■■■■ 4.28
SLC35A3-214ENST00000639088 ABCC9O60706 1549 aa40.75■■■■■ 4.11
SLC35A3-214ENST00000639088 DCAF8L2P0C7V8 631 aa39.56■■■■□ 3.92
SLC35A3-214ENST00000639088 ZCCHC6Q5VYS8 1495 aaKnown RBP39.39■■■■□ 3.9
SLC35A3-214ENST00000639088 NACADO15069 1562 aa39.29■■■■□ 3.88
SLC35A3-214ENST00000639088 RB1CC1Q8TDY2 1594 aa39.28■■■■□ 3.88
SLC35A3-214ENST00000639088 MYO15BQ96JP2 1530 aa39.11■■■■□ 3.85
SLC35A3-214ENST00000639088 DCAF1Q9Y4B6 1507 aa39.05■■■■□ 3.84
SLC35A3-214ENST00000639088 UNC13AQ9UPW8 1703 aa38.3■■■■□ 3.72
SLC35A3-214ENST00000639088 SCRIBQ14160 1630 aa38.25■■■■□ 3.71
SLC35A3-214ENST00000639088 PABPN1Q86U42 306 aaKnown RBP eCLIP38.18■■■■□ 3.7
SLC35A3-214ENST00000639088 BICRAQ9NZM4 1560 aa38.02■■■■□ 3.68
SLC35A3-214ENST00000639088 SHROOM4Q9ULL8 1493 aa37.67■■■■□ 3.62
SLC35A3-214ENST00000639088 DNAJC5BQ9UF47 199 aa37.13■■■■□ 3.53
SLC35A3-214ENST00000639088 EIF4G1Q04637 1599 aaKnown RBP37.05■■■■□ 3.52
SLC35A3-214ENST00000639088 CC2D2AQ9P2K1 1620 aa36.83■■■■□ 3.49
SLC35A3-214ENST00000639088 CECR2Q9BXF3 1484 aa36.78■■■■□ 3.48
SLC35A3-214ENST00000639088 BAZ1AQ9NRL2 1556 aaPredicted RBP36.6■■■■□ 3.45
SLC35A3-214ENST00000639088 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
SLC35A3-214ENST00000639088 MROH2BQ7Z745 1585 aa36.41■■■■□ 3.42
SLC35A3-214ENST00000639088 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
SLC35A3-214ENST00000639088 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
SLC35A3-214ENST00000639088 NCAPD3P42695 1498 aa36.26■■■■□ 3.4
SLC35A3-214ENST00000639088 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
SLC35A3-214ENST00000639088 RSF1Q96T23 1441 aaPredicted RBP36.13■■■■□ 3.37
SLC35A3-214ENST00000639088 HMGXB3Q12766 1538 aa36.08■■■■□ 3.37
SLC35A3-214ENST00000639088 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
SLC35A3-214ENST00000639088 WIZO95785 1651 aa36.02■■■■□ 3.36
SLC35A3-214ENST00000639088 SUPT5HO00267 1087 aaKnown RBP35.71■■■■□ 3.31
SLC35A3-214ENST00000639088 TOP2AP11388 1531 aaKnown RBP35.66■■■■□ 3.3
SLC35A3-214ENST00000639088 NESP48681 1621 aa35.32■■■■□ 3.25
SLC35A3-214ENST00000639088 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
SLC35A3-214ENST00000639088 LAMC3Q9Y6N6 1575 aa35.26■■■■□ 3.24
SLC35A3-214ENST00000639088 CADPSQ9ULU8 1353 aa35.26■■■■□ 3.24
SLC35A3-214ENST00000639088 ERCC6Q03468 1493 aa35.15■■■■□ 3.22
SLC35A3-214ENST00000639088 PDS5BQ9NTI5 1447 aa35.07■■■■□ 3.21
SLC35A3-214ENST00000639088 CFTRP13569 1480 aa35.07■■■■□ 3.21
SLC35A3-214ENST00000639088 KIF21AQ7Z4S6 1674 aa34.87■■■■□ 3.17
SLC35A3-214ENST00000639088 FANCD2Q9BXW9 1451 aa34.85■■■■□ 3.17
SLC35A3-214ENST00000639088 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
SLC35A3-214ENST00000639088 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
SLC35A3-214ENST00000639088 THOC2Q8NI27 1593 aaKnown RBP34.67■■■■□ 3.14
SLC35A3-214ENST00000639088 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
SLC35A3-214ENST00000639088 CUX2O14529 1486 aa34.6■■■■□ 3.13
SLC35A3-214ENST00000639088 WDR62O43379 1518 aa34.5■■■■□ 3.11
SLC35A3-214ENST00000639088 URB2Q14146 1524 aaKnown RBP34.44■■■■□ 3.1
SLC35A3-214ENST00000639088 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
SLC35A3-214ENST00000639088 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
SLC35A3-214ENST00000639088 DNMBPQ6XZF7 1577 aa34.27■■■■□ 3.08
SLC35A3-214ENST00000639088 CUX1P39880 1505 aa34.13■■■■□ 3.05
SLC35A3-214ENST00000639088 WRNQ14191 1432 aaPredicted RBP eCLIP34.08■■■■□ 3.05
SLC35A3-214ENST00000639088 IFT140Q96RY7 1462 aa34.04■■■■□ 3.04
SLC35A3-214ENST00000639088 POLA1P09884 1462 aaPredicted RBP34.03■■■■□ 3.04
SLC35A3-214ENST00000639088 FGD5Q6ZNL6 1462 aa34.01■■■■□ 3.03
SLC35A3-214ENST00000639088 SYNJ1O43426 1573 aa33.98■■■■□ 3.03
SLC35A3-214ENST00000639088 SOGA1O94964 1423 aa33.95■■■■□ 3.02
SLC35A3-214ENST00000639088 TOP2BQ02880 1626 aa33.92■■■■□ 3.02
SLC35A3-214ENST00000639088 BIVM-ERCC5R4GMW8 1640 aa33.92■■■■□ 3.02
SLC35A3-214ENST00000639088 RAD54L2Q9Y4B4 1467 aa33.91■■■■□ 3.02
SLC35A3-214ENST00000639088 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
SLC35A3-214ENST00000639088 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
SLC35A3-214ENST00000639088 TDRD9Q8NDG6 1382 aaKnown RBP33.73■■■□□ 2.99
SLC35A3-214ENST00000639088 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.99
SLC35A3-214ENST00000639088 EIF4G3O43432 1585 aaKnown RBP33.7■■■□□ 2.99
SLC35A3-214ENST00000639088 ABCA10Q8WWZ4 1543 aa33.67■■■□□ 2.98
SLC35A3-214ENST00000639088 CHIC1Q5VXU3 224 aa33.67■■■□□ 2.98
SLC35A3-214ENST00000639088 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
SLC35A3-214ENST00000639088 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
SLC35A3-214ENST00000639088 GAPVD1Q14C86 1478 aa33.54■■■□□ 2.96
SLC35A3-214ENST00000639088 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
SLC35A3-214ENST00000639088 ABCA5Q8WWZ7 1642 aa33.47■■■□□ 2.95
SLC35A3-214ENST00000639088 SNAPC4Q5SXM2 1469 aa33.41■■■□□ 2.94
SLC35A3-214ENST00000639088 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
SLC35A3-214ENST00000639088 FBLN2P98095 1184 aa33.37■■■□□ 2.93
SLC35A3-214ENST00000639088 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
SLC35A3-214ENST00000639088 MAGI1Q96QZ7 1491 aaPredicted RBP33.36■■■□□ 2.93
SLC35A3-214ENST00000639088 OSCARQ8IYS5 282 aa33.31■■■□□ 2.92
SLC35A3-214ENST00000639088 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
SLC35A3-214ENST00000639088 ERICH3Q5RHP9 1530 aa33.27■■■□□ 2.92
SLC35A3-214ENST00000639088 DNAJC5Q9H3Z4 198 aa33.25■■■□□ 2.91
SLC35A3-214ENST00000639088 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
SLC35A3-214ENST00000639088 RUSC2Q8N2Y8 1516 aa33.22■■■□□ 2.91
SLC35A3-214ENST00000639088 CHD1O14646 1710 aa33.2■■■□□ 2.9
SLC35A3-214ENST00000639088 FHAD1B1AJZ9 1412 aa33.16■■■□□ 2.9
SLC35A3-214ENST00000639088 IGF1RP08069 1367 aa33.16■■■□□ 2.9
SLC35A3-214ENST00000639088 ADAMTS12P58397 1594 aa33.15■■■□□ 2.9
SLC35A3-214ENST00000639088 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
SLC35A3-214ENST00000639088 EEA1Q15075 1411 aa33.04■■■□□ 2.88
SLC35A3-214ENST00000639088 CUL7Q14999 1698 aa33.02■■■□□ 2.88
SLC35A3-214ENST00000639088 FAM9AQ8IZU1 332 aaPredicted RBP33■■■□□ 2.87
SLC35A3-214ENST00000639088 CARMIL1Q5VZK9 1371 aa33■■■□□ 2.87
SLC35A3-214ENST00000639088 CSRNP3Q8WYN3 585 aa32.89■■■□□ 2.86
SLC35A3-214ENST00000639088 NUP160Q12769 1436 aa32.87■■■□□ 2.85
SLC35A3-214ENST00000639088 CLASP1Q7Z460 1538 aa32.85■■■□□ 2.85
SLC35A3-214ENST00000639088 CEP170Q5SW79 1584 aa32.85■■■□□ 2.85
SLC35A3-214ENST00000639088 RAPGEF2Q9Y4G8 1499 aa32.82■■■□□ 2.85
SLC35A3-214ENST00000639088 PRXQ9BXM0 1461 aa32.8■■■□□ 2.84
SLC35A3-214ENST00000639088 KIF21BO75037 1637 aa32.7■■■□□ 2.83
SLC35A3-214ENST00000639088 ARHGEF11O15085 1522 aa32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms