RNA–Protein interactions for RNA: ENST00000639069.1

KCNMA1-250, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,899 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-250ENST00000639069 NISCHQ9Y2I1 1504 aa17.74■□□□□ 0.43
KCNMA1-250ENST00000639069 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
KCNMA1-250ENST00000639069 ZCCHC6Q5VYS8 1495 aaKnown RBP14.88□□□□□ -0.03
KCNMA1-250ENST00000639069 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
KCNMA1-250ENST00000639069 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.05
KCNMA1-250ENST00000639069 ABCC9O60706 1549 aa14.69□□□□□ -0.06
KCNMA1-250ENST00000639069 NACADO15069 1562 aa14.66□□□□□ -0.06
KCNMA1-250ENST00000639069 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
KCNMA1-250ENST00000639069 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
KCNMA1-250ENST00000639069 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
KCNMA1-250ENST00000639069 MYT1Q01538 1121 aa14.32□□□□□ -0.12
KCNMA1-250ENST00000639069 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
KCNMA1-250ENST00000639069 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
KCNMA1-250ENST00000639069 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
KCNMA1-250ENST00000639069 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
KCNMA1-250ENST00000639069 BAZ1AQ9NRL2 1556 aaPredicted RBP13.8□□□□□ -0.2
KCNMA1-250ENST00000639069 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
KCNMA1-250ENST00000639069 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
KCNMA1-250ENST00000639069 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
KCNMA1-250ENST00000639069 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
KCNMA1-250ENST00000639069 SMARCA2P51531 1590 aa13.61□□□□□ -0.23
KCNMA1-250ENST00000639069 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
KCNMA1-250ENST00000639069 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
KCNMA1-250ENST00000639069 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
KCNMA1-250ENST00000639069 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
KCNMA1-250ENST00000639069 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
KCNMA1-250ENST00000639069 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-250ENST00000639069 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
KCNMA1-250ENST00000639069 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
KCNMA1-250ENST00000639069 HMGXB3Q12766 1538 aa13.47□□□□□ -0.25
KCNMA1-250ENST00000639069 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
KCNMA1-250ENST00000639069 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
KCNMA1-250ENST00000639069 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-250ENST00000639069 WIZO95785 1651 aa13.44□□□□□ -0.26
KCNMA1-250ENST00000639069 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
KCNMA1-250ENST00000639069 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
KCNMA1-250ENST00000639069 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
KCNMA1-250ENST00000639069 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
KCNMA1-250ENST00000639069 CFTRP13569 1480 aa13.07□□□□□ -0.32
KCNMA1-250ENST00000639069 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
KCNMA1-250ENST00000639069 PRDM2Q13029 1718 aa13.05□□□□□ -0.32
KCNMA1-250ENST00000639069 PDS5BQ9NTI5 1447 aa13□□□□□ -0.33
KCNMA1-250ENST00000639069 CHIC1Q5VXU3 224 aa12.98□□□□□ -0.33
KCNMA1-250ENST00000639069 ABCC8Q09428 1581 aa12.96□□□□□ -0.33
KCNMA1-250ENST00000639069 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
KCNMA1-250ENST00000639069 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
KCNMA1-250ENST00000639069 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.35
KCNMA1-250ENST00000639069 BCL11AQ9H165 835 aa12.89□□□□□ -0.35
KCNMA1-250ENST00000639069 CEP164Q9UPV0 1460 aa12.89□□□□□ -0.35
KCNMA1-250ENST00000639069 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
KCNMA1-250ENST00000639069 EEA1Q15075 1411 aa12.87□□□□□ -0.35
KCNMA1-250ENST00000639069 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
KCNMA1-250ENST00000639069 TOP2BQ02880 1626 aa12.84□□□□□ -0.35
KCNMA1-250ENST00000639069 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
KCNMA1-250ENST00000639069 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
KCNMA1-250ENST00000639069 NESP48681 1621 aa12.78□□□□□ -0.36
KCNMA1-250ENST00000639069 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
KCNMA1-250ENST00000639069 EIF5BO60841 1220 aaKnown RBP12.75□□□□□ -0.37
KCNMA1-250ENST00000639069 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
KCNMA1-250ENST00000639069 CUX1P39880 1505 aa12.74□□□□□ -0.37
KCNMA1-250ENST00000639069 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
KCNMA1-250ENST00000639069 KIF21AQ7Z4S6 1674 aa12.71□□□□□ -0.38
KCNMA1-250ENST00000639069 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
KCNMA1-250ENST00000639069 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-250ENST00000639069 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
KCNMA1-250ENST00000639069 WDR62O43379 1518 aa12.68□□□□□ -0.38
KCNMA1-250ENST00000639069 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
KCNMA1-250ENST00000639069 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-250ENST00000639069 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-250ENST00000639069 IFT140Q96RY7 1462 aa12.64□□□□□ -0.39
KCNMA1-250ENST00000639069 APLP2Q06481 763 aa12.64□□□□□ -0.39
KCNMA1-250ENST00000639069 SOGA1O94964 1423 aa12.64□□□□□ -0.39
KCNMA1-250ENST00000639069 ABCA10Q8WWZ4 1543 aa12.64□□□□□ -0.39
KCNMA1-250ENST00000639069 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
KCNMA1-250ENST00000639069 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
KCNMA1-250ENST00000639069 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
KCNMA1-250ENST00000639069 CUX2O14529 1486 aa12.59□□□□□ -0.39
KCNMA1-250ENST00000639069 KIF21BO75037 1637 aa12.56□□□□□ -0.4
KCNMA1-250ENST00000639069 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
KCNMA1-250ENST00000639069 ERICH3Q5RHP9 1530 aa12.54□□□□□ -0.4
KCNMA1-250ENST00000639069 CUL7Q14999 1698 aa12.53□□□□□ -0.4
KCNMA1-250ENST00000639069 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-250ENST00000639069 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
KCNMA1-250ENST00000639069 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
KCNMA1-250ENST00000639069 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
KCNMA1-250ENST00000639069 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
KCNMA1-250ENST00000639069 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
KCNMA1-250ENST00000639069 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
KCNMA1-250ENST00000639069 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
KCNMA1-250ENST00000639069 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
KCNMA1-250ENST00000639069 CARMIL1Q5VZK9 1371 aa12.45□□□□□ -0.42
KCNMA1-250ENST00000639069 IGF1RP08069 1367 aa12.45□□□□□ -0.42
KCNMA1-250ENST00000639069 FHAD1B1AJZ9 1412 aa12.43□□□□□ -0.42
KCNMA1-250ENST00000639069 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-250ENST00000639069 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
KCNMA1-250ENST00000639069 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
KCNMA1-250ENST00000639069 PBRM1Q86U86 1689 aa12.41□□□□□ -0.42
KCNMA1-250ENST00000639069 HRCP23327 699 aa12.4□□□□□ -0.42
KCNMA1-250ENST00000639069 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
KCNMA1-250ENST00000639069 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms