RNA–Protein interactions for RNA: ENST00000639042.1

GFAP-231, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-231	ENST00000639042	NISCH	Q9Y2I1	1504 aa		25.78	■■□□□ 1.72
GFAP-231	ENST00000639042	CCDC180	Q9P1Z9	1646 aa		22.29	■■□□□ 1.16
GFAP-231	ENST00000639042	ABCC9	O60706	1549 aa		22.06	■■□□□ 1.12
GFAP-231	ENST00000639042	ZCCHC6	Q5VYS8	1495 aa	Known RBP	21.75	■■□□□ 1.07
GFAP-231	ENST00000639042	CHIC1	Q5VXU3	224 aa		21.47	■■□□□ 1.03
GFAP-231	ENST00000639042	DCAF1	Q9Y4B6	1507 aa		21.43	■■□□□ 1.02
GFAP-231	ENST00000639042	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.13	■□□□□ 0.97
GFAP-231	ENST00000639042	SHROOM4	Q9ULL8	1493 aa		21.1	■□□□□ 0.97
GFAP-231	ENST00000639042	MYO15B	Q96JP2	1530 aa		21.03	■□□□□ 0.96
GFAP-231	ENST00000639042	RB1CC1	Q8TDY2	1594 aa		21.01	■□□□□ 0.95
GFAP-231	ENST00000639042	NACAD	O15069	1562 aa		20.88	■□□□□ 0.93
GFAP-231	ENST00000639042	DCAF8L2	P0C7V8	631 aa		20.88	■□□□□ 0.93
GFAP-231	ENST00000639042	DNAJC5B	Q9UF47	199 aa		20.64	■□□□□ 0.9
GFAP-231	ENST00000639042	UNC13A	Q9UPW8	1703 aa		20.6	■□□□□ 0.89
GFAP-231	ENST00000639042	PABPN1	Q86U42	306 aa	Known RBP eCLIP	20.58	■□□□□ 0.89
GFAP-231	ENST00000639042	SUPT5H	O00267	1087 aa	Known RBP	20.57	■□□□□ 0.88
GFAP-231	ENST00000639042	BICRA	Q9NZM4	1560 aa		20.41	■□□□□ 0.86
GFAP-231	ENST00000639042	SCRIB	Q14160	1630 aa		20.39	■□□□□ 0.86
GFAP-231	ENST00000639042	RSF1	Q96T23	1441 aa	Predicted RBP	20.17	■□□□□ 0.82
GFAP-231	ENST00000639042	CECR2	Q9BXF3	1484 aa		19.94	■□□□□ 0.78
GFAP-231	ENST00000639042	CC2D2A	Q9P2K1	1620 aa		19.94	■□□□□ 0.78
GFAP-231	ENST00000639042	EIF4G1	Q04637	1599 aa	Known RBP	19.9	■□□□□ 0.78
GFAP-231	ENST00000639042	MROH2B	Q7Z745	1585 aa		19.89	■□□□□ 0.77
GFAP-231	ENST00000639042	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	19.84	■□□□□ 0.77
GFAP-231	ENST00000639042	WIZ	O95785	1651 aa		19.73	■□□□□ 0.75
GFAP-231	ENST00000639042	SMARCA4	P51532	1647 aa		19.69	■□□□□ 0.74
GFAP-231	ENST00000639042	TOP2A	P11388	1531 aa	Known RBP	19.58	■□□□□ 0.72
GFAP-231	ENST00000639042	PEG3	Q9GZU2	1588 aa		19.54	■□□□□ 0.72
GFAP-231	ENST00000639042	SMARCA2	P51531	1590 aa		19.41	■□□□□ 0.7
GFAP-231	ENST00000639042	CCDC88B	A6NC98	1476 aa		19.38	■□□□□ 0.69
GFAP-231	ENST00000639042	TRIM41	Q8WV44	630 aa		19.38	■□□□□ 0.69
GFAP-231	ENST00000639042	NCAPD3	P42695	1498 aa		19.27	■□□□□ 0.68
GFAP-231	ENST00000639042	ATAD2B	Q9ULI0	1458 aa		19.26	■□□□□ 0.67
GFAP-231	ENST00000639042	LOC105371045	A0A1W2PR82	267 aa		19.25	■□□□□ 0.67
GFAP-231	ENST00000639042	HMGXB3	Q12766	1538 aa		19.13	■□□□□ 0.65
GFAP-231	ENST00000639042	BAZ1B	Q9UIG0	1483 aa	Known RBP	19.12	■□□□□ 0.65
GFAP-231	ENST00000639042	PHF23	Q9BUL5	403 aa	Predicted RBP	19.06	■□□□□ 0.64
GFAP-231	ENST00000639042	ABCC8	Q09428	1581 aa		19.03	■□□□□ 0.64
GFAP-231	ENST00000639042	ERCC6	Q03468	1493 aa		19.03	■□□□□ 0.64
GFAP-231	ENST00000639042	NES	P48681	1621 aa		18.99	■□□□□ 0.63
GFAP-231	ENST00000639042	EEA1	Q15075	1411 aa		18.98	■□□□□ 0.63
GFAP-231	ENST00000639042	CUX2	O14529	1486 aa		18.93	■□□□□ 0.62
GFAP-231	ENST00000639042	FAM9A	Q8IZU1	332 aa	Predicted RBP	18.92	■□□□□ 0.62
GFAP-231	ENST00000639042	WRN	Q14191	1432 aa	Predicted RBP eCLIP	18.92	■□□□□ 0.62
GFAP-231	ENST00000639042	DNAJC5	Q9H3Z4	198 aa		18.85	■□□□□ 0.61
GFAP-231	ENST00000639042	LAMC3	Q9Y6N6	1575 aa		18.83	■□□□□ 0.6
GFAP-231	ENST00000639042	TRIM26	Q12899	539 aa	Predicted RBP	18.83	■□□□□ 0.6
GFAP-231	ENST00000639042	SYNJ1	O43426	1573 aa		18.82	■□□□□ 0.6
GFAP-231	ENST00000639042	PCGF6	Q9BYE7	350 aa		18.82	■□□□□ 0.6
GFAP-231	ENST00000639042	SOGA1	O94964	1423 aa		18.81	■□□□□ 0.6
GFAP-231	ENST00000639042	HRC	P23327	699 aa		18.78	■□□□□ 0.6
GFAP-231	ENST00000639042	CSRNP3	Q8WYN3	585 aa		18.77	■□□□□ 0.6
GFAP-231	ENST00000639042	TOP2B	Q02880	1626 aa		18.77	■□□□□ 0.59
GFAP-231	ENST00000639042	KIF21A	Q7Z4S6	1674 aa		18.75	■□□□□ 0.59
GFAP-231	ENST00000639042	BIVM-ERCC5	R4GMW8	1640 aa		18.75	■□□□□ 0.59
GFAP-231	ENST00000639042	CFTR	P13569	1480 aa		18.75	■□□□□ 0.59
GFAP-231	ENST00000639042	TNIK	Q9UKE5	1360 aa		18.75	■□□□□ 0.59
GFAP-231	ENST00000639042	THOC2	Q8NI27	1593 aa	Known RBP	18.75	■□□□□ 0.59
GFAP-231	ENST00000639042	RUSC2	Q8N2Y8	1516 aa		18.72	■□□□□ 0.59
GFAP-231	ENST00000639042	PDS5B	Q9NTI5	1447 aa		18.72	■□□□□ 0.59
GFAP-231	ENST00000639042	CADPS	Q9ULU8	1353 aa		18.71	■□□□□ 0.59
GFAP-231	ENST00000639042	PRDM2	Q13029	1718 aa		18.69	■□□□□ 0.58
GFAP-231	ENST00000639042	KIF21B	O75037	1637 aa		18.68	■□□□□ 0.58
GFAP-231	ENST00000639042	GOLGA3	Q08378	1498 aa		18.65	■□□□□ 0.58
GFAP-231	ENST00000639042	CEP164	Q9UPV0	1460 aa		18.62	■□□□□ 0.57
GFAP-231	ENST00000639042	CEP162	Q5TB80	1403 aa		18.6	■□□□□ 0.57
GFAP-231	ENST00000639042	CUX1	P39880	1505 aa		18.57	■□□□□ 0.56
GFAP-231	ENST00000639042	MRC2	Q9UBG0	1479 aa		18.55	■□□□□ 0.56
GFAP-231	ENST00000639042	WDR62	O43379	1518 aa		18.5	■□□□□ 0.55
GFAP-231	ENST00000639042	EHMT2	Q96KQ7	1210 aa		18.5	■□□□□ 0.55
GFAP-231	ENST00000639042	FANCD2	Q9BXW9	1451 aa		18.5	■□□□□ 0.55
GFAP-231	ENST00000639042	ERICH3	Q5RHP9	1530 aa		18.48	■□□□□ 0.55
GFAP-231	ENST00000639042	PRX	Q9BXM0	1461 aa		18.47	■□□□□ 0.55
GFAP-231	ENST00000639042	UBTF	P17480	764 aa	Known RBP	18.44	■□□□□ 0.54
GFAP-231	ENST00000639042	RAPGEF2	Q9Y4G8	1499 aa		18.41	■□□□□ 0.54
GFAP-231	ENST00000639042	KIF27	Q86VH2	1401 aa		18.4	■□□□□ 0.54
GFAP-231	ENST00000639042	ZEB1	P37275	1124 aa	Predicted RBP	18.36	■□□□□ 0.53
GFAP-231	ENST00000639042	URB2	Q14146	1524 aa	Known RBP	18.35	■□□□□ 0.53
GFAP-231	ENST00000639042	CLIP1	P30622	1438 aa		18.34	■□□□□ 0.53
GFAP-231	ENST00000639042	VPS8	Q8N3P4	1428 aa		18.3	■□□□□ 0.52
GFAP-231	ENST00000639042	DNMBP	Q6XZF7	1577 aa		18.27	■□□□□ 0.51
GFAP-231	ENST00000639042	FGD5	Q6ZNL6	1462 aa		18.26	■□□□□ 0.51
GFAP-231	ENST00000639042	IGF1R	P08069	1367 aa		18.25	■□□□□ 0.51
GFAP-231	ENST00000639042	ABCA10	Q8WWZ4	1543 aa		18.19	■□□□□ 0.5
GFAP-231	ENST00000639042	TOPBP1	Q92547	1522 aa		18.19	■□□□□ 0.5
GFAP-231	ENST00000639042	PPARGC1B	Q86YN6	1023 aa	Known RBP	18.17	■□□□□ 0.5
GFAP-231	ENST00000639042	ARAP1	Q96P48	1450 aa		18.15	■□□□□ 0.5
GFAP-231	ENST00000639042	OSCAR	Q8IYS5	282 aa		18.13	■□□□□ 0.49
GFAP-231	ENST00000639042	POLA1	P09884	1462 aa	Predicted RBP	18.13	■□□□□ 0.49
GFAP-231	ENST00000639042	IFT140	Q96RY7	1462 aa		18.13	■□□□□ 0.49
GFAP-231	ENST00000639042	ZNF608	Q9ULD9	1512 aa	Predicted RBP	18.13	■□□□□ 0.49
GFAP-231	ENST00000639042	CARMIL1	Q5VZK9	1371 aa		18.12	■□□□□ 0.49
GFAP-231	ENST00000639042	WDR97	A6NE52	1622 aa		18.09	■□□□□ 0.49
GFAP-231	ENST00000639042	ARHGAP35	Q9NRY4	1499 aa		18.07	■□□□□ 0.48
GFAP-231	ENST00000639042	CUL7	Q14999	1698 aa		18.04	■□□□□ 0.48
GFAP-231	ENST00000639042	RAD54L2	Q9Y4B4	1467 aa		18.03	■□□□□ 0.48
GFAP-231	ENST00000639042	MAP3K1	Q13233	1512 aa		18.02	■□□□□ 0.48
GFAP-231	ENST00000639042	EIF4G3	O43432	1585 aa	Known RBP	18.01	■□□□□ 0.47
GFAP-231	ENST00000639042	APLP2	Q06481	763 aa		18	■□□□□ 0.47
GFAP-231	ENST00000639042	TARBP1	Q13395	1621 aa	Known RBP	17.99	■□□□□ 0.47

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