RNA–Protein interactions for RNA: ENST00000638709.1

FGFR2-227, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5

Gene FGFR2, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-227ENST00000638709 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
FGFR2-227ENST00000638709 NISCHQ9Y2I1 1504 aa18.75■□□□□ 0.59
FGFR2-227ENST00000638709 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
FGFR2-227ENST00000638709 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
FGFR2-227ENST00000638709 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
FGFR2-227ENST00000638709 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
FGFR2-227ENST00000638709 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
FGFR2-227ENST00000638709 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
FGFR2-227ENST00000638709 SHROOM4Q9ULL8 1493 aa15.51■□□□□ 0.07
FGFR2-227ENST00000638709 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
FGFR2-227ENST00000638709 MYO15BQ96JP2 1530 aa15.21■□□□□ 0.03
FGFR2-227ENST00000638709 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
FGFR2-227ENST00000638709 FOXD1Q16676 465 aa15.12■□□□□ 0.01
FGFR2-227ENST00000638709 NACADO15069 1562 aa14.97□□□□□ -0.01
FGFR2-227ENST00000638709 ABCC9O60706 1549 aa14.95□□□□□ -0.02
FGFR2-227ENST00000638709 SCRIBQ14160 1630 aa14.9□□□□□ -0.02
FGFR2-227ENST00000638709 RB1CC1Q8TDY2 1594 aa14.74□□□□□ -0.05
FGFR2-227ENST00000638709 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
FGFR2-227ENST00000638709 PLPPR3Q6T4P5 718 aa14.53□□□□□ -0.08
FGFR2-227ENST00000638709 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
FGFR2-227ENST00000638709 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
FGFR2-227ENST00000638709 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
FGFR2-227ENST00000638709 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
FGFR2-227ENST00000638709 WIZO95785 1651 aa14.4□□□□□ -0.1
FGFR2-227ENST00000638709 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
FGFR2-227ENST00000638709 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
FGFR2-227ENST00000638709 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
FGFR2-227ENST00000638709 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
FGFR2-227ENST00000638709 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
FGFR2-227ENST00000638709 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
FGFR2-227ENST00000638709 ADRA2BP18089 450 aa14.23□□□□□ -0.13
FGFR2-227ENST00000638709 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
FGFR2-227ENST00000638709 SMARCA2P51531 1590 aa14.16□□□□□ -0.14
FGFR2-227ENST00000638709 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
FGFR2-227ENST00000638709 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
FGFR2-227ENST00000638709 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
FGFR2-227ENST00000638709 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.16
FGFR2-227ENST00000638709 HRCP23327 699 aa13.98□□□□□ -0.17
FGFR2-227ENST00000638709 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
FGFR2-227ENST00000638709 ATAD2BQ9ULI0 1458 aa13.97□□□□□ -0.17
FGFR2-227ENST00000638709 MSH5O43196 834 aa13.96□□□□□ -0.17
FGFR2-227ENST00000638709 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
FGFR2-227ENST00000638709 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
FGFR2-227ENST00000638709 FAM9AQ8IZU1 332 aaPredicted RBP13.93□□□□□ -0.18
FGFR2-227ENST00000638709 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
FGFR2-227ENST00000638709 EEA1Q15075 1411 aa13.91□□□□□ -0.18
FGFR2-227ENST00000638709 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
FGFR2-227ENST00000638709 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
FGFR2-227ENST00000638709 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
FGFR2-227ENST00000638709 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
FGFR2-227ENST00000638709 SOGA1O94964 1423 aa13.76□□□□□ -0.21
FGFR2-227ENST00000638709 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
FGFR2-227ENST00000638709 TNIKQ9UKE5 1360 aa13.73□□□□□ -0.21
FGFR2-227ENST00000638709 GOLGA3Q08378 1498 aa13.7□□□□□ -0.22
FGFR2-227ENST00000638709 KIF21BO75037 1637 aa13.7□□□□□ -0.22
FGFR2-227ENST00000638709 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
FGFR2-227ENST00000638709 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
FGFR2-227ENST00000638709 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
FGFR2-227ENST00000638709 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
FGFR2-227ENST00000638709 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
FGFR2-227ENST00000638709 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
FGFR2-227ENST00000638709 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
FGFR2-227ENST00000638709 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
FGFR2-227ENST00000638709 ZEB1P37275 1124 aaPredicted RBP13.64□□□□□ -0.23
FGFR2-227ENST00000638709 CFTRP13569 1480 aa13.6□□□□□ -0.23
FGFR2-227ENST00000638709 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
FGFR2-227ENST00000638709 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
FGFR2-227ENST00000638709 CUX1P39880 1505 aa13.53□□□□□ -0.24
FGFR2-227ENST00000638709 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
FGFR2-227ENST00000638709 CLIP1P30622 1438 aa13.48□□□□□ -0.25
FGFR2-227ENST00000638709 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
FGFR2-227ENST00000638709 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
FGFR2-227ENST00000638709 PRXQ9BXM0 1461 aa13.46□□□□□ -0.25
FGFR2-227ENST00000638709 KIF27Q86VH2 1401 aa13.44□□□□□ -0.26
FGFR2-227ENST00000638709 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
FGFR2-227ENST00000638709 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
FGFR2-227ENST00000638709 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
FGFR2-227ENST00000638709 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
FGFR2-227ENST00000638709 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
FGFR2-227ENST00000638709 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
FGFR2-227ENST00000638709 APLP2Q06481 763 aa13.29□□□□□ -0.28
FGFR2-227ENST00000638709 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
FGFR2-227ENST00000638709 CUX2O14529 1486 aa13.29□□□□□ -0.28
FGFR2-227ENST00000638709 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
FGFR2-227ENST00000638709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
FGFR2-227ENST00000638709 IGF1RP08069 1367 aa13.24□□□□□ -0.29
FGFR2-227ENST00000638709 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
FGFR2-227ENST00000638709 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
FGFR2-227ENST00000638709 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
FGFR2-227ENST00000638709 ARHGAP35Q9NRY4 1499 aa13.21□□□□□ -0.3
FGFR2-227ENST00000638709 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
FGFR2-227ENST00000638709 CUL7Q14999 1698 aa13.2□□□□□ -0.3
FGFR2-227ENST00000638709 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
FGFR2-227ENST00000638709 POLA1P09884 1462 aaPredicted RBP13.18□□□□□ -0.3
FGFR2-227ENST00000638709 MAP3K1Q13233 1512 aa13.17□□□□□ -0.3
FGFR2-227ENST00000638709 NESP48681 1621 aa13.16□□□□□ -0.3
FGFR2-227ENST00000638709 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
FGFR2-227ENST00000638709 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
FGFR2-227ENST00000638709 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
FGFR2-227ENST00000638709 RRBP1Q9P2E9 1410 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms