RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
PAX6-235ENST00000638629 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
PAX6-235ENST00000638629 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.72
PAX6-235ENST00000638629 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
PAX6-235ENST00000638629 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
PAX6-235ENST00000638629 ABCC9O60706 1549 aa19.23■□□□□ 0.67
PAX6-235ENST00000638629 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
PAX6-235ENST00000638629 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
PAX6-235ENST00000638629 NACADO15069 1562 aa18.91■□□□□ 0.62
PAX6-235ENST00000638629 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
PAX6-235ENST00000638629 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
PAX6-235ENST00000638629 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
PAX6-235ENST00000638629 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
PAX6-235ENST00000638629 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
PAX6-235ENST00000638629 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
PAX6-235ENST00000638629 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
PAX6-235ENST00000638629 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
PAX6-235ENST00000638629 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
PAX6-235ENST00000638629 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
PAX6-235ENST00000638629 SMARCA4P51532 1647 aa17.91■□□□□ 0.46
PAX6-235ENST00000638629 WIZO95785 1651 aa17.88■□□□□ 0.45
PAX6-235ENST00000638629 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
PAX6-235ENST00000638629 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
PAX6-235ENST00000638629 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
PAX6-235ENST00000638629 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
PAX6-235ENST00000638629 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
PAX6-235ENST00000638629 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
PAX6-235ENST00000638629 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
PAX6-235ENST00000638629 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
PAX6-235ENST00000638629 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
PAX6-235ENST00000638629 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
PAX6-235ENST00000638629 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
PAX6-235ENST00000638629 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
PAX6-235ENST00000638629 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
PAX6-235ENST00000638629 HRCP23327 699 aa17.1■□□□□ 0.33
PAX6-235ENST00000638629 CFTRP13569 1480 aa17.09■□□□□ 0.33
PAX6-235ENST00000638629 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
PAX6-235ENST00000638629 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
PAX6-235ENST00000638629 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
PAX6-235ENST00000638629 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
PAX6-235ENST00000638629 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.3
PAX6-235ENST00000638629 SYNJ1O43426 1573 aa16.96■□□□□ 0.3
PAX6-235ENST00000638629 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
PAX6-235ENST00000638629 NESP48681 1621 aa16.89■□□□□ 0.29
PAX6-235ENST00000638629 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
PAX6-235ENST00000638629 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
PAX6-235ENST00000638629 SOGA1O94964 1423 aa16.86■□□□□ 0.29
PAX6-235ENST00000638629 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
PAX6-235ENST00000638629 CUX1P39880 1505 aa16.85■□□□□ 0.29
PAX6-235ENST00000638629 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
PAX6-235ENST00000638629 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
PAX6-235ENST00000638629 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
PAX6-235ENST00000638629 EEA1Q15075 1411 aa16.79■□□□□ 0.28
PAX6-235ENST00000638629 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
PAX6-235ENST00000638629 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
PAX6-235ENST00000638629 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
PAX6-235ENST00000638629 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
PAX6-235ENST00000638629 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
PAX6-235ENST00000638629 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
PAX6-235ENST00000638629 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
PAX6-235ENST00000638629 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
PAX6-235ENST00000638629 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
PAX6-235ENST00000638629 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
PAX6-235ENST00000638629 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
PAX6-235ENST00000638629 POLA1P09884 1462 aaPredicted RBP16.58■□□□□ 0.24
PAX6-235ENST00000638629 CUX2O14529 1486 aa16.57■□□□□ 0.24
PAX6-235ENST00000638629 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
PAX6-235ENST00000638629 KIF21BO75037 1637 aa16.56■□□□□ 0.24
PAX6-235ENST00000638629 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
PAX6-235ENST00000638629 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
PAX6-235ENST00000638629 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
PAX6-235ENST00000638629 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
PAX6-235ENST00000638629 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
PAX6-235ENST00000638629 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
PAX6-235ENST00000638629 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
PAX6-235ENST00000638629 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
PAX6-235ENST00000638629 IGF1RP08069 1367 aa16.48■□□□□ 0.23
PAX6-235ENST00000638629 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
PAX6-235ENST00000638629 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
PAX6-235ENST00000638629 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
PAX6-235ENST00000638629 CEP162Q5TB80 1403 aa16.44■□□□□ 0.22
PAX6-235ENST00000638629 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
PAX6-235ENST00000638629 WDR62O43379 1518 aa16.42■□□□□ 0.22
PAX6-235ENST00000638629 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
PAX6-235ENST00000638629 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
PAX6-235ENST00000638629 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
PAX6-235ENST00000638629 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
PAX6-235ENST00000638629 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
PAX6-235ENST00000638629 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
PAX6-235ENST00000638629 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
PAX6-235ENST00000638629 CLIP1P30622 1438 aa16.32■□□□□ 0.2
PAX6-235ENST00000638629 CUL7Q14999 1698 aa16.3■□□□□ 0.2
PAX6-235ENST00000638629 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
PAX6-235ENST00000638629 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
PAX6-235ENST00000638629 ZNF608Q9ULD9 1512 aaPredicted RBP16.25■□□□□ 0.19
PAX6-235ENST00000638629 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
PAX6-235ENST00000638629 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
PAX6-235ENST00000638629 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
PAX6-235ENST00000638629 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
PAX6-235ENST00000638629 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms