RNA–Protein interactions for RNA: ENST00000638481.1

SPIN3-208, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-208ENST00000638481 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
SPIN3-208ENST00000638481 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
SPIN3-208ENST00000638481 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
SPIN3-208ENST00000638481 ABCC9O60706 1549 aa28.07■■■□□ 2.08
SPIN3-208ENST00000638481 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
SPIN3-208ENST00000638481 DCAF1Q9Y4B6 1507 aa27.97■■■□□ 2.07
SPIN3-208ENST00000638481 MYO15BQ96JP2 1530 aa27.66■■■□□ 2.02
SPIN3-208ENST00000638481 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
SPIN3-208ENST00000638481 NACADO15069 1562 aa27.55■■■□□ 2
SPIN3-208ENST00000638481 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
SPIN3-208ENST00000638481 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
SPIN3-208ENST00000638481 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
SPIN3-208ENST00000638481 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
SPIN3-208ENST00000638481 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
SPIN3-208ENST00000638481 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
SPIN3-208ENST00000638481 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
SPIN3-208ENST00000638481 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
SPIN3-208ENST00000638481 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
SPIN3-208ENST00000638481 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
SPIN3-208ENST00000638481 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
SPIN3-208ENST00000638481 WIZO95785 1651 aa26.01■■□□□ 1.76
SPIN3-208ENST00000638481 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
SPIN3-208ENST00000638481 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
SPIN3-208ENST00000638481 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
SPIN3-208ENST00000638481 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.69
SPIN3-208ENST00000638481 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
SPIN3-208ENST00000638481 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
SPIN3-208ENST00000638481 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
SPIN3-208ENST00000638481 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
SPIN3-208ENST00000638481 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
SPIN3-208ENST00000638481 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
SPIN3-208ENST00000638481 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
SPIN3-208ENST00000638481 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
SPIN3-208ENST00000638481 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
SPIN3-208ENST00000638481 CFTRP13569 1480 aa24.84■■□□□ 1.57
SPIN3-208ENST00000638481 PRDM2Q13029 1718 aa24.82■■□□□ 1.56
SPIN3-208ENST00000638481 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
SPIN3-208ENST00000638481 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
SPIN3-208ENST00000638481 WRNQ14191 1432 aaPredicted RBP eCLIP24.7■■□□□ 1.54
SPIN3-208ENST00000638481 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
SPIN3-208ENST00000638481 NESP48681 1621 aa24.64■■□□□ 1.53
SPIN3-208ENST00000638481 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
SPIN3-208ENST00000638481 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
SPIN3-208ENST00000638481 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
SPIN3-208ENST00000638481 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
SPIN3-208ENST00000638481 CUX1P39880 1505 aa24.49■■□□□ 1.51
SPIN3-208ENST00000638481 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
SPIN3-208ENST00000638481 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.5
SPIN3-208ENST00000638481 SOGA1O94964 1423 aa24.38■■□□□ 1.49
SPIN3-208ENST00000638481 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
SPIN3-208ENST00000638481 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SPIN3-208ENST00000638481 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
SPIN3-208ENST00000638481 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
SPIN3-208ENST00000638481 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
SPIN3-208ENST00000638481 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
SPIN3-208ENST00000638481 EEA1Q15075 1411 aa24.25■■□□□ 1.47
SPIN3-208ENST00000638481 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
SPIN3-208ENST00000638481 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
SPIN3-208ENST00000638481 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
SPIN3-208ENST00000638481 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
SPIN3-208ENST00000638481 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
SPIN3-208ENST00000638481 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
SPIN3-208ENST00000638481 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
SPIN3-208ENST00000638481 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
SPIN3-208ENST00000638481 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
SPIN3-208ENST00000638481 CUX2O14529 1486 aa24.04■■□□□ 1.44
SPIN3-208ENST00000638481 KIF21BO75037 1637 aa24.01■■□□□ 1.43
SPIN3-208ENST00000638481 WDR97A6NE52 1622 aa24■■□□□ 1.43
SPIN3-208ENST00000638481 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
SPIN3-208ENST00000638481 WDR62O43379 1518 aa23.99■■□□□ 1.43
SPIN3-208ENST00000638481 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
SPIN3-208ENST00000638481 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
SPIN3-208ENST00000638481 HRCP23327 699 aa23.93■■□□□ 1.42
SPIN3-208ENST00000638481 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
SPIN3-208ENST00000638481 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
SPIN3-208ENST00000638481 PRXQ9BXM0 1461 aa23.89■■□□□ 1.42
SPIN3-208ENST00000638481 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
SPIN3-208ENST00000638481 IGF1RP08069 1367 aa23.85■■□□□ 1.41
SPIN3-208ENST00000638481 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
SPIN3-208ENST00000638481 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.4
SPIN3-208ENST00000638481 UBTFP17480 764 aaKnown RBP23.82■■□□□ 1.4
SPIN3-208ENST00000638481 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
SPIN3-208ENST00000638481 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
SPIN3-208ENST00000638481 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
SPIN3-208ENST00000638481 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
SPIN3-208ENST00000638481 CUL7Q14999 1698 aa23.73■■□□□ 1.39
SPIN3-208ENST00000638481 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
SPIN3-208ENST00000638481 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
SPIN3-208ENST00000638481 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
SPIN3-208ENST00000638481 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
SPIN3-208ENST00000638481 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
SPIN3-208ENST00000638481 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
SPIN3-208ENST00000638481 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
SPIN3-208ENST00000638481 CLIP1P30622 1438 aa23.56■■□□□ 1.36
SPIN3-208ENST00000638481 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
SPIN3-208ENST00000638481 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.35
SPIN3-208ENST00000638481 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
SPIN3-208ENST00000638481 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
SPIN3-208ENST00000638481 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
SPIN3-208ENST00000638481 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms