RNA–Protein interactions for RNA: ENST00000638346.1

PAX6-234, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-234ENST00000638346 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
PAX6-234ENST00000638346 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
PAX6-234ENST00000638346 ABCC9O60706 1549 aa21.81■■□□□ 1.08
PAX6-234ENST00000638346 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
PAX6-234ENST00000638346 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
PAX6-234ENST00000638346 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
PAX6-234ENST00000638346 NACADO15069 1562 aa21.12■□□□□ 0.97
PAX6-234ENST00000638346 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.97
PAX6-234ENST00000638346 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
PAX6-234ENST00000638346 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.92
PAX6-234ENST00000638346 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
PAX6-234ENST00000638346 UNC13AQ9UPW8 1703 aa20.66■□□□□ 0.9
PAX6-234ENST00000638346 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
PAX6-234ENST00000638346 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
PAX6-234ENST00000638346 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
PAX6-234ENST00000638346 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
PAX6-234ENST00000638346 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
PAX6-234ENST00000638346 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
PAX6-234ENST00000638346 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
PAX6-234ENST00000638346 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
PAX6-234ENST00000638346 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
PAX6-234ENST00000638346 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
PAX6-234ENST00000638346 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
PAX6-234ENST00000638346 WIZO95785 1651 aa19.6■□□□□ 0.73
PAX6-234ENST00000638346 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
PAX6-234ENST00000638346 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
PAX6-234ENST00000638346 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
PAX6-234ENST00000638346 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
PAX6-234ENST00000638346 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
PAX6-234ENST00000638346 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
PAX6-234ENST00000638346 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
PAX6-234ENST00000638346 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
PAX6-234ENST00000638346 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
PAX6-234ENST00000638346 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
PAX6-234ENST00000638346 NESP48681 1621 aa19■□□□□ 0.63
PAX6-234ENST00000638346 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
PAX6-234ENST00000638346 CFTRP13569 1480 aa18.93■□□□□ 0.62
PAX6-234ENST00000638346 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
PAX6-234ENST00000638346 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
PAX6-234ENST00000638346 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
PAX6-234ENST00000638346 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
PAX6-234ENST00000638346 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
PAX6-234ENST00000638346 ABCC8Q09428 1581 aa18.77■□□□□ 0.59
PAX6-234ENST00000638346 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
PAX6-234ENST00000638346 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
PAX6-234ENST00000638346 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
PAX6-234ENST00000638346 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
PAX6-234ENST00000638346 EEA1Q15075 1411 aa18.62■□□□□ 0.57
PAX6-234ENST00000638346 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
PAX6-234ENST00000638346 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
PAX6-234ENST00000638346 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.56
PAX6-234ENST00000638346 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.56
PAX6-234ENST00000638346 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
PAX6-234ENST00000638346 CUX1P39880 1505 aa18.54■□□□□ 0.56
PAX6-234ENST00000638346 TOP2BQ02880 1626 aa18.54■□□□□ 0.56
PAX6-234ENST00000638346 WDR62O43379 1518 aa18.52■□□□□ 0.56
PAX6-234ENST00000638346 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
PAX6-234ENST00000638346 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
PAX6-234ENST00000638346 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
PAX6-234ENST00000638346 SOGA1O94964 1423 aa18.47■□□□□ 0.55
PAX6-234ENST00000638346 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
PAX6-234ENST00000638346 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
PAX6-234ENST00000638346 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
PAX6-234ENST00000638346 CUX2O14529 1486 aa18.36■□□□□ 0.53
PAX6-234ENST00000638346 RUSC2Q8N2Y8 1516 aa18.35■□□□□ 0.53
PAX6-234ENST00000638346 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
PAX6-234ENST00000638346 GOLGA3Q08378 1498 aa18.32■□□□□ 0.52
PAX6-234ENST00000638346 KIF21BO75037 1637 aa18.31■□□□□ 0.52
PAX6-234ENST00000638346 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
PAX6-234ENST00000638346 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
PAX6-234ENST00000638346 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
PAX6-234ENST00000638346 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
PAX6-234ENST00000638346 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
PAX6-234ENST00000638346 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
PAX6-234ENST00000638346 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
PAX6-234ENST00000638346 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
PAX6-234ENST00000638346 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
PAX6-234ENST00000638346 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
PAX6-234ENST00000638346 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
PAX6-234ENST00000638346 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
PAX6-234ENST00000638346 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
PAX6-234ENST00000638346 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.5
PAX6-234ENST00000638346 PRXQ9BXM0 1461 aa18.15■□□□□ 0.5
PAX6-234ENST00000638346 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
PAX6-234ENST00000638346 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
PAX6-234ENST00000638346 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
PAX6-234ENST00000638346 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
PAX6-234ENST00000638346 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
PAX6-234ENST00000638346 PBRM1Q86U86 1689 aa18.05■□□□□ 0.48
PAX6-234ENST00000638346 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
PAX6-234ENST00000638346 IGF1RP08069 1367 aa18.01■□□□□ 0.47
PAX6-234ENST00000638346 CLIP1P30622 1438 aa18■□□□□ 0.47
PAX6-234ENST00000638346 SNAPC4Q5SXM2 1469 aa18■□□□□ 0.47
PAX6-234ENST00000638346 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
PAX6-234ENST00000638346 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
PAX6-234ENST00000638346 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
PAX6-234ENST00000638346 CUL7Q14999 1698 aa17.91■□□□□ 0.46
PAX6-234ENST00000638346 VPS8Q8N3P4 1428 aa17.9■□□□□ 0.46
PAX6-234ENST00000638346 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
PAX6-234ENST00000638346 SYNJ2O15056 1496 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms