RNA–Protein interactions for RNA: ENST00000637942.1

CACNB4-267, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 4,020 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-267	ENST00000637942	NISCH	Q9Y2I1	1504 aa		6.73	□□□□□ -1.33
CACNB4-267	ENST00000637942	CHIC1	Q5VXU3	224 aa		6.66	□□□□□ -1.34
CACNB4-267	ENST00000637942	POTED	Q86YR6	584 aa		6.65	□□□□□ -1.34
CACNB4-267	ENST00000637942	AEBP2	Q6ZN18	517 aa	Predicted RBP	6.37	□□□□□ -1.39
CACNB4-267	ENST00000637942	CCDC180	Q9P1Z9	1646 aa		5.85	□□□□□ -1.47
CACNB4-267	ENST00000637942	PHF23	Q9BUL5	403 aa	Predicted RBP	5.73	□□□□□ -1.49
CACNB4-267	ENST00000637942	ZCCHC6	Q5VYS8	1495 aa	Known RBP	5.71	□□□□□ -1.5
CACNB4-267	ENST00000637942	DCAF8L2	P0C7V8	631 aa		5.71	□□□□□ -1.5
CACNB4-267	ENST00000637942	SENP3	Q9H4L4	574 aa	Predicted RBP	5.6	□□□□□ -1.51
CACNB4-267	ENST00000637942	PLPPR3	Q6T4P5	718 aa		5.59	□□□□□ -1.51
CACNB4-267	ENST00000637942	ABCC9	O60706	1549 aa		5.57	□□□□□ -1.52
CACNB4-267	ENST00000637942	DCAF1	Q9Y4B6	1507 aa		5.56	□□□□□ -1.52
CACNB4-267	ENST00000637942	SHROOM4	Q9ULL8	1493 aa		5.55	□□□□□ -1.52
CACNB4-267	ENST00000637942	MYO15B	Q96JP2	1530 aa		5.42	□□□□□ -1.54
CACNB4-267	ENST00000637942	SCRIB	Q14160	1630 aa		5.39	□□□□□ -1.55
CACNB4-267	ENST00000637942	UNC13A	Q9UPW8	1703 aa		5.36	□□□□□ -1.55
CACNB4-267	ENST00000637942	SUPT5H	O00267	1087 aa	Known RBP	5.34	□□□□□ -1.55
CACNB4-267	ENST00000637942	NACAD	O15069	1562 aa		5.33	□□□□□ -1.56
CACNB4-267	ENST00000637942	RB1CC1	Q8TDY2	1594 aa		5.31	□□□□□ -1.56
CACNB4-267	ENST00000637942	PABPN1	Q86U42	306 aa	Known RBP eCLIP	5.28	□□□□□ -1.56
CACNB4-267	ENST00000637942	RSF1	Q96T23	1441 aa	Predicted RBP	5.27	□□□□□ -1.57
CACNB4-267	ENST00000637942	SLC24A1	O60721	1099 aa		5.26	□□□□□ -1.57
CACNB4-267	ENST00000637942	CECR2	Q9BXF3	1484 aa		5.25	□□□□□ -1.57
CACNB4-267	ENST00000637942	WIZ	O95785	1651 aa		5.25	□□□□□ -1.57
CACNB4-267	ENST00000637942	EIF4G1	Q04637	1599 aa	Known RBP	5.25	□□□□□ -1.57
CACNB4-267	ENST00000637942	MROH2B	Q7Z745	1585 aa		5.24	□□□□□ -1.57
CACNB4-267	ENST00000637942	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNB4-267	ENST00000637942	BICRA	Q9NZM4	1560 aa		5.21	□□□□□ -1.58
CACNB4-267	ENST00000637942	DNAJC5B	Q9UF47	199 aa		5.18	□□□□□ -1.58
CACNB4-267	ENST00000637942	SMARCA4	P51532	1647 aa		5.18	□□□□□ -1.58
CACNB4-267	ENST00000637942	TOP2A	P11388	1531 aa	Known RBP	5.13	□□□□□ -1.59
CACNB4-267	ENST00000637942	SMARCA2	P51531	1590 aa		5.13	□□□□□ -1.59
CACNB4-267	ENST00000637942	PEG3	Q9GZU2	1588 aa		5.12	□□□□□ -1.59
CACNB4-267	ENST00000637942	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.1	□□□□□ -1.59
CACNB4-267	ENST00000637942	CCDC88B	A6NC98	1476 aa		5.07	□□□□□ -1.6
CACNB4-267	ENST00000637942	LOC105371045	A0A1W2PR82	267 aa		5.07	□□□□□ -1.6
CACNB4-267	ENST00000637942	ABCC8	Q09428	1581 aa		5.06	□□□□□ -1.6
CACNB4-267	ENST00000637942	NCBP3	Q53F19	620 aa	Known RBP	5.01	□□□□□ -1.61
CACNB4-267	ENST00000637942	ERCC6	Q03468	1493 aa		5.01	□□□□□ -1.61
CACNB4-267	ENST00000637942	PRKCSH	P14314	528 aa	Predicted RBP	5.01	□□□□□ -1.61
CACNB4-267	ENST00000637942	FOXD1	Q16676	465 aa		5	□□□□□ -1.61
CACNB4-267	ENST00000637942	SYNJ1	O43426	1573 aa		5	□□□□□ -1.61
CACNB4-267	ENST00000637942	ATAD2B	Q9ULI0	1458 aa		5	□□□□□ -1.61
CACNB4-267	ENST00000637942	MSH5	O43196	834 aa		5	□□□□□ -1.61
CACNB4-267	ENST00000637942	PRDM2	Q13029	1718 aa		4.99	□□□□□ -1.61
CACNB4-267	ENST00000637942	RUSC2	Q8N2Y8	1516 aa		4.97	□□□□□ -1.61
CACNB4-267	ENST00000637942	ADRA2B	P18089	450 aa		4.97	□□□□□ -1.61
CACNB4-267	ENST00000637942	TRIM41	Q8WV44	630 aa		4.97	□□□□□ -1.61
CACNB4-267	ENST00000637942	BIVM-ERCC5	R4GMW8	1640 aa		4.97	□□□□□ -1.61
CACNB4-267	ENST00000637942	KCNA4	P22459	653 aa		4.96	□□□□□ -1.62
CACNB4-267	ENST00000637942	HMGXB3	Q12766	1538 aa		4.96	□□□□□ -1.62
CACNB4-267	ENST00000637942	SOGA1	O94964	1423 aa		4.95	□□□□□ -1.62
CACNB4-267	ENST00000637942	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.95	□□□□□ -1.62
CACNB4-267	ENST00000637942	HRC	P23327	699 aa		4.94	□□□□□ -1.62
CACNB4-267	ENST00000637942	APLP2	Q06481	763 aa		4.94	□□□□□ -1.62
CACNB4-267	ENST00000637942	PCGF6	Q9BYE7	350 aa		4.94	□□□□□ -1.62
CACNB4-267	ENST00000637942	TOP2B	Q02880	1626 aa		4.93	□□□□□ -1.62
CACNB4-267	ENST00000637942	KIF21B	O75037	1637 aa		4.92	□□□□□ -1.62
CACNB4-267	ENST00000637942	PPP6R1	Q9UPN7	881 aa		4.91	□□□□□ -1.62
CACNB4-267	ENST00000637942	NCAPD3	P42695	1498 aa		4.91	□□□□□ -1.62
CACNB4-267	ENST00000637942	EHMT2	Q96KQ7	1210 aa		4.9	□□□□□ -1.62
CACNB4-267	ENST00000637942	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4.9	□□□□□ -1.62
CACNB4-267	ENST00000637942	SLC4A1AP	Q9BWU0	796 aa	Known RBP	4.9	□□□□□ -1.63
CACNB4-267	ENST00000637942	PPP4R3CP	Q6ZMV5	832 aa		4.89	□□□□□ -1.63
CACNB4-267	ENST00000637942	CUX1	P39880	1505 aa		4.89	□□□□□ -1.63
CACNB4-267	ENST00000637942	PPARGC1B	Q86YN6	1023 aa	Known RBP	4.88	□□□□□ -1.63
CACNB4-267	ENST00000637942	FBLN2	P98095	1184 aa		4.88	□□□□□ -1.63
CACNB4-267	ENST00000637942	TRIM26	Q12899	539 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNB4-267	ENST00000637942	CC2D2A	Q9P2K1	1620 aa		4.87	□□□□□ -1.63
CACNB4-267	ENST00000637942	EEA1	Q15075	1411 aa		4.87	□□□□□ -1.63
CACNB4-267	ENST00000637942	CEP162	Q5TB80	1403 aa		4.87	□□□□□ -1.63
CACNB4-267	ENST00000637942	TRH	P20396	242 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNB4-267	ENST00000637942	DAXX	Q9UER7	740 aa	Predicted RBP	4.86	□□□□□ -1.63
CACNB4-267	ENST00000637942	CFTR	P13569	1480 aa		4.86	□□□□□ -1.63
CACNB4-267	ENST00000637942	DNAJC5	Q9H3Z4	198 aa		4.86	□□□□□ -1.63
CACNB4-267	ENST00000637942	TNIK	Q9UKE5	1360 aa		4.86	□□□□□ -1.63
CACNB4-267	ENST00000637942	PDS5B	Q9NTI5	1447 aa		4.86	□□□□□ -1.63
CACNB4-267	ENST00000637942	SCAF1	Q9H7N4	1312 aa	Known RBP	4.85	□□□□□ -1.63
CACNB4-267	ENST00000637942	GOLGA3	Q08378	1498 aa		4.85	□□□□□ -1.63
CACNB4-267	ENST00000637942	RAPGEF2	Q9Y4G8	1499 aa		4.84	□□□□□ -1.63
CACNB4-267	ENST00000637942	WDR97	A6NE52	1622 aa		4.83	□□□□□ -1.64
CACNB4-267	ENST00000637942	POTEH	Q6S545	545 aa		4.83	□□□□□ -1.64
CACNB4-267	ENST00000637942	ERICH3	Q5RHP9	1530 aa		4.83	□□□□□ -1.64
CACNB4-267	ENST00000637942	PIAS4	Q8N2W9	510 aa	Predicted RBP	4.83	□□□□□ -1.64
CACNB4-267	ENST00000637942	CEP164	Q9UPV0	1460 aa		4.83	□□□□□ -1.64
CACNB4-267	ENST00000637942	PRX	Q9BXM0	1461 aa		4.82	□□□□□ -1.64
CACNB4-267	ENST00000637942	CSRNP3	Q8WYN3	585 aa		4.81	□□□□□ -1.64
CACNB4-267	ENST00000637942	ARAP1	Q96P48	1450 aa		4.8	□□□□□ -1.64
CACNB4-267	ENST00000637942	OSCAR	Q8IYS5	282 aa		4.8	□□□□□ -1.64
CACNB4-267	ENST00000637942	NPM1	P06748	294 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
CACNB4-267	ENST00000637942	KIF21A	Q7Z4S6	1674 aa		4.78	□□□□□ -1.64
CACNB4-267	ENST00000637942	LRRIQ1	Q96JM4	1722 aa		4.77	□□□□□ -1.65
CACNB4-267	ENST00000637942	CNKSR2	Q8WXI2	1034 aa		4.77	□□□□□ -1.65
CACNB4-267	ENST00000637942	CLIP1	P30622	1438 aa		4.77	□□□□□ -1.65
CACNB4-267	ENST00000637942	NES	P48681	1621 aa		4.77	□□□□□ -1.65
CACNB4-267	ENST00000637942	VPS8	Q8N3P4	1428 aa		4.77	□□□□□ -1.65
CACNB4-267	ENST00000637942	FGD5	Q6ZNL6	1462 aa		4.77	□□□□□ -1.65
CACNB4-267	ENST00000637942	DNMBP	Q6XZF7	1577 aa		4.76	□□□□□ -1.65
CACNB4-267	ENST00000637942	CTTNBP2	Q8WZ74	1663 aa		4.76	□□□□□ -1.65
CACNB4-267	ENST00000637942	CUX2	O14529	1486 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms