RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.6
CHRNA7-227ENST00000637350 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
CHRNA7-227ENST00000637350 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
CHRNA7-227ENST00000637350 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
CHRNA7-227ENST00000637350 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
CHRNA7-227ENST00000637350 ABCC9O60706 1549 aa30.79■■■□□ 2.52
CHRNA7-227ENST00000637350 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
CHRNA7-227ENST00000637350 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
CHRNA7-227ENST00000637350 NACADO15069 1562 aa30.38■■■□□ 2.45
CHRNA7-227ENST00000637350 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
CHRNA7-227ENST00000637350 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
CHRNA7-227ENST00000637350 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
CHRNA7-227ENST00000637350 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.32
CHRNA7-227ENST00000637350 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
CHRNA7-227ENST00000637350 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
CHRNA7-227ENST00000637350 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
CHRNA7-227ENST00000637350 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
CHRNA7-227ENST00000637350 MROH2BQ7Z745 1585 aa28.99■■■□□ 2.23
CHRNA7-227ENST00000637350 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
CHRNA7-227ENST00000637350 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
CHRNA7-227ENST00000637350 SMARCA4P51532 1647 aa28.81■■■□□ 2.2
CHRNA7-227ENST00000637350 WIZO95785 1651 aa28.77■■■□□ 2.2
CHRNA7-227ENST00000637350 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.15
CHRNA7-227ENST00000637350 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.15
CHRNA7-227ENST00000637350 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
CHRNA7-227ENST00000637350 EIF4G1Q04637 1599 aaKnown RBP28.31■■■□□ 2.12
CHRNA7-227ENST00000637350 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
CHRNA7-227ENST00000637350 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
CHRNA7-227ENST00000637350 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
CHRNA7-227ENST00000637350 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
CHRNA7-227ENST00000637350 HMGXB3Q12766 1538 aa28.01■■■□□ 2.07
CHRNA7-227ENST00000637350 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
CHRNA7-227ENST00000637350 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
CHRNA7-227ENST00000637350 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
CHRNA7-227ENST00000637350 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
CHRNA7-227ENST00000637350 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
CHRNA7-227ENST00000637350 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
CHRNA7-227ENST00000637350 FAM9AQ8IZU1 332 aaPredicted RBP27.51■■□□□ 1.99
CHRNA7-227ENST00000637350 CFTRP13569 1480 aa27.47■■□□□ 1.99
CHRNA7-227ENST00000637350 WRNQ14191 1432 aaPredicted RBP eCLIP27.45■■□□□ 1.98
CHRNA7-227ENST00000637350 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
CHRNA7-227ENST00000637350 HRCP23327 699 aa27.33■■□□□ 1.97
CHRNA7-227ENST00000637350 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
CHRNA7-227ENST00000637350 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
CHRNA7-227ENST00000637350 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
CHRNA7-227ENST00000637350 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
CHRNA7-227ENST00000637350 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
CHRNA7-227ENST00000637350 SOGA1O94964 1423 aa27.15■■□□□ 1.94
CHRNA7-227ENST00000637350 EEA1Q15075 1411 aa27.11■■□□□ 1.93
CHRNA7-227ENST00000637350 TRIM26Q12899 539 aaPredicted RBP27.1■■□□□ 1.93
CHRNA7-227ENST00000637350 CUX1P39880 1505 aa27.09■■□□□ 1.93
CHRNA7-227ENST00000637350 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
CHRNA7-227ENST00000637350 NESP48681 1621 aa27.07■■□□□ 1.92
CHRNA7-227ENST00000637350 FANCD2Q9BXW9 1451 aa27.05■■□□□ 1.92
CHRNA7-227ENST00000637350 RUSC2Q8N2Y8 1516 aa27.03■■□□□ 1.92
CHRNA7-227ENST00000637350 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
CHRNA7-227ENST00000637350 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
CHRNA7-227ENST00000637350 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
CHRNA7-227ENST00000637350 PPARGC1BQ86YN6 1023 aaKnown RBP26.84■■□□□ 1.89
CHRNA7-227ENST00000637350 DNMBPQ6XZF7 1577 aa26.81■■□□□ 1.88
CHRNA7-227ENST00000637350 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
CHRNA7-227ENST00000637350 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
CHRNA7-227ENST00000637350 KIF27Q86VH2 1401 aa26.75■■□□□ 1.87
CHRNA7-227ENST00000637350 KIF21BO75037 1637 aa26.74■■□□□ 1.87
CHRNA7-227ENST00000637350 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
CHRNA7-227ENST00000637350 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
CHRNA7-227ENST00000637350 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
CHRNA7-227ENST00000637350 CEP162Q5TB80 1403 aa26.69■■□□□ 1.86
CHRNA7-227ENST00000637350 TNIKQ9UKE5 1360 aa26.68■■□□□ 1.86
CHRNA7-227ENST00000637350 UBTFP17480 764 aaKnown RBP26.65■■□□□ 1.86
CHRNA7-227ENST00000637350 POLA1P09884 1462 aaPredicted RBP26.65■■□□□ 1.86
CHRNA7-227ENST00000637350 CUX2O14529 1486 aa26.64■■□□□ 1.86
CHRNA7-227ENST00000637350 PRXQ9BXM0 1461 aa26.58■■□□□ 1.85
CHRNA7-227ENST00000637350 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
CHRNA7-227ENST00000637350 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
CHRNA7-227ENST00000637350 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
CHRNA7-227ENST00000637350 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
CHRNA7-227ENST00000637350 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
CHRNA7-227ENST00000637350 IGF1RP08069 1367 aa26.49■■□□□ 1.83
CHRNA7-227ENST00000637350 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
CHRNA7-227ENST00000637350 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
CHRNA7-227ENST00000637350 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
CHRNA7-227ENST00000637350 WDR62O43379 1518 aa26.36■■□□□ 1.81
CHRNA7-227ENST00000637350 TARBP1Q13395 1621 aaKnown RBP26.35■■□□□ 1.81
CHRNA7-227ENST00000637350 CLIP1P30622 1438 aa26.33■■□□□ 1.81
CHRNA7-227ENST00000637350 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
CHRNA7-227ENST00000637350 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
CHRNA7-227ENST00000637350 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
CHRNA7-227ENST00000637350 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
CHRNA7-227ENST00000637350 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
CHRNA7-227ENST00000637350 CUL7Q14999 1698 aa26.27■■□□□ 1.8
CHRNA7-227ENST00000637350 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
CHRNA7-227ENST00000637350 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
CHRNA7-227ENST00000637350 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
CHRNA7-227ENST00000637350 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
CHRNA7-227ENST00000637350 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
CHRNA7-227ENST00000637350 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
CHRNA7-227ENST00000637350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.1■■□□□ 1.77
CHRNA7-227ENST00000637350 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
CHRNA7-227ENST00000637350 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms