RNA–Protein interactions for RNA: ENST00000637328.1

LINC01548-202, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 1 (best)

Gene LINC01548, Length 454 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-202ENST00000637328 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
LINC01548-202ENST00000637328 ABCC9O60706 1549 aa24.93■■□□□ 1.58
LINC01548-202ENST00000637328 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
LINC01548-202ENST00000637328 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
LINC01548-202ENST00000637328 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
LINC01548-202ENST00000637328 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
LINC01548-202ENST00000637328 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
LINC01548-202ENST00000637328 NACADO15069 1562 aa22.82■■□□□ 1.24
LINC01548-202ENST00000637328 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
LINC01548-202ENST00000637328 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
LINC01548-202ENST00000637328 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
LINC01548-202ENST00000637328 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.2
LINC01548-202ENST00000637328 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
LINC01548-202ENST00000637328 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
LINC01548-202ENST00000637328 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
LINC01548-202ENST00000637328 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
LINC01548-202ENST00000637328 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
LINC01548-202ENST00000637328 EIF4G1Q04637 1599 aaKnown RBP22.15■■□□□ 1.14
LINC01548-202ENST00000637328 CUX2O14529 1486 aa21.93■■□□□ 1.1
LINC01548-202ENST00000637328 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
LINC01548-202ENST00000637328 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
LINC01548-202ENST00000637328 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
LINC01548-202ENST00000637328 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
LINC01548-202ENST00000637328 NESP48681 1621 aa21.12■□□□□ 0.97
LINC01548-202ENST00000637328 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
LINC01548-202ENST00000637328 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
LINC01548-202ENST00000637328 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
LINC01548-202ENST00000637328 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
LINC01548-202ENST00000637328 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
LINC01548-202ENST00000637328 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
LINC01548-202ENST00000637328 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
LINC01548-202ENST00000637328 HMGXB3Q12766 1538 aa20.83■□□□□ 0.92
LINC01548-202ENST00000637328 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
LINC01548-202ENST00000637328 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
LINC01548-202ENST00000637328 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
LINC01548-202ENST00000637328 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
LINC01548-202ENST00000637328 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
LINC01548-202ENST00000637328 AEBP2Q6ZN18 517 aaPredicted RBP20.66■□□□□ 0.9
LINC01548-202ENST00000637328 WIZO95785 1651 aa20.64■□□□□ 0.9
LINC01548-202ENST00000637328 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
LINC01548-202ENST00000637328 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
LINC01548-202ENST00000637328 RIMBP3CA6NJZ7 1639 aa20.57■□□□□ 0.88
LINC01548-202ENST00000637328 RIMBP3BA6NNM3 1639 aa20.57■□□□□ 0.88
LINC01548-202ENST00000637328 RIMBP3Q9UFD9 1639 aa20.57■□□□□ 0.88
LINC01548-202ENST00000637328 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
LINC01548-202ENST00000637328 WDR62O43379 1518 aa20.57■□□□□ 0.88
LINC01548-202ENST00000637328 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
LINC01548-202ENST00000637328 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
LINC01548-202ENST00000637328 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
LINC01548-202ENST00000637328 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
LINC01548-202ENST00000637328 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
LINC01548-202ENST00000637328 CYB5RLQ6IPT4 315 aa20.37■□□□□ 0.85
LINC01548-202ENST00000637328 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
LINC01548-202ENST00000637328 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
LINC01548-202ENST00000637328 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
LINC01548-202ENST00000637328 ARAP1Q96P48 1450 aa20.16■□□□□ 0.82
LINC01548-202ENST00000637328 URB2Q14146 1524 aaKnown RBP20.09■□□□□ 0.81
LINC01548-202ENST00000637328 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.8
LINC01548-202ENST00000637328 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
LINC01548-202ENST00000637328 CFTRP13569 1480 aa19.97■□□□□ 0.79
LINC01548-202ENST00000637328 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
LINC01548-202ENST00000637328 CHD1O14646 1710 aa19.84■□□□□ 0.77
LINC01548-202ENST00000637328 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
LINC01548-202ENST00000637328 FBLN2P98095 1184 aa19.79■□□□□ 0.76
LINC01548-202ENST00000637328 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
LINC01548-202ENST00000637328 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
LINC01548-202ENST00000637328 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
LINC01548-202ENST00000637328 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
LINC01548-202ENST00000637328 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
LINC01548-202ENST00000637328 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.73
LINC01548-202ENST00000637328 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
LINC01548-202ENST00000637328 SYNJ1O43426 1573 aa19.54■□□□□ 0.72
LINC01548-202ENST00000637328 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
LINC01548-202ENST00000637328 CUX1P39880 1505 aa19.52■□□□□ 0.72
LINC01548-202ENST00000637328 KDM4FA0A1W2PPD8 638 aa19.49■□□□□ 0.71
LINC01548-202ENST00000637328 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
LINC01548-202ENST00000637328 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
LINC01548-202ENST00000637328 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
LINC01548-202ENST00000637328 SNAPC4Q5SXM2 1469 aa19.46■□□□□ 0.71
LINC01548-202ENST00000637328 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
LINC01548-202ENST00000637328 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
LINC01548-202ENST00000637328 POLA1P09884 1462 aaPredicted RBP19.41■□□□□ 0.7
LINC01548-202ENST00000637328 FGD5Q6ZNL6 1462 aa19.36■□□□□ 0.69
LINC01548-202ENST00000637328 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
LINC01548-202ENST00000637328 RAD54L2Q9Y4B4 1467 aa19.36■□□□□ 0.69
LINC01548-202ENST00000637328 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
LINC01548-202ENST00000637328 KIF13AQ9H1H9 1805 aa19.32■□□□□ 0.68
LINC01548-202ENST00000637328 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
LINC01548-202ENST00000637328 SOGA1O94964 1423 aa19.32■□□□□ 0.68
LINC01548-202ENST00000637328 WDR97A6NE52 1622 aa19.28■□□□□ 0.68
LINC01548-202ENST00000637328 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.67
LINC01548-202ENST00000637328 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
LINC01548-202ENST00000637328 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
LINC01548-202ENST00000637328 EEA1Q15075 1411 aa19.22■□□□□ 0.67
LINC01548-202ENST00000637328 KIF27Q86VH2 1401 aa19.18■□□□□ 0.66
LINC01548-202ENST00000637328 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
LINC01548-202ENST00000637328 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
LINC01548-202ENST00000637328 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
LINC01548-202ENST00000637328 ABCC10Q5T3U5 1492 aa19.14■□□□□ 0.65
LINC01548-202ENST00000637328 FBXO41Q8TF61 875 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms