RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
GABRB3-221ENST00000636690 CCDC180Q9P1Z9 1646 aa13.16□□□□□ -0.3
GABRB3-221ENST00000636690 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
GABRB3-221ENST00000636690 DCAF1Q9Y4B6 1507 aa12.69□□□□□ -0.38
GABRB3-221ENST00000636690 MYO15BQ96JP2 1530 aa12.45□□□□□ -0.42
GABRB3-221ENST00000636690 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
GABRB3-221ENST00000636690 NACADO15069 1562 aa12.17□□□□□ -0.46
GABRB3-221ENST00000636690 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
GABRB3-221ENST00000636690 ABCC9O60706 1549 aa12.09□□□□□ -0.47
GABRB3-221ENST00000636690 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
GABRB3-221ENST00000636690 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
GABRB3-221ENST00000636690 RB1CC1Q8TDY2 1594 aa11.94□□□□□ -0.5
GABRB3-221ENST00000636690 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-221ENST00000636690 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
GABRB3-221ENST00000636690 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
GABRB3-221ENST00000636690 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
GABRB3-221ENST00000636690 CECR2Q9BXF3 1484 aa11.64□□□□□ -0.55
GABRB3-221ENST00000636690 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
GABRB3-221ENST00000636690 SMARCA4P51532 1647 aa11.58□□□□□ -0.56
GABRB3-221ENST00000636690 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
GABRB3-221ENST00000636690 WIZO95785 1651 aa11.55□□□□□ -0.56
GABRB3-221ENST00000636690 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
GABRB3-221ENST00000636690 BICRAQ9NZM4 1560 aa11.51□□□□□ -0.57
GABRB3-221ENST00000636690 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
GABRB3-221ENST00000636690 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
GABRB3-221ENST00000636690 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
GABRB3-221ENST00000636690 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
GABRB3-221ENST00000636690 EEA1Q15075 1411 aa11.33□□□□□ -0.6
GABRB3-221ENST00000636690 ATAD2BQ9ULI0 1458 aa11.3□□□□□ -0.6
GABRB3-221ENST00000636690 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
GABRB3-221ENST00000636690 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
GABRB3-221ENST00000636690 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
GABRB3-221ENST00000636690 HRCP23327 699 aa11.23□□□□□ -0.61
GABRB3-221ENST00000636690 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
GABRB3-221ENST00000636690 TRIM26Q12899 539 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-221ENST00000636690 NCAPD3P42695 1498 aa11.2□□□□□ -0.62
GABRB3-221ENST00000636690 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
GABRB3-221ENST00000636690 ABCC8Q09428 1581 aa11.17□□□□□ -0.62
GABRB3-221ENST00000636690 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
GABRB3-221ENST00000636690 TNIKQ9UKE5 1360 aa11.12□□□□□ -0.63
GABRB3-221ENST00000636690 AEBP2Q6ZN18 517 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-221ENST00000636690 KIF21BO75037 1637 aa11.09□□□□□ -0.63
GABRB3-221ENST00000636690 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
GABRB3-221ENST00000636690 FAM9AQ8IZU1 332 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-221ENST00000636690 TOP2BQ02880 1626 aa11.08□□□□□ -0.64
GABRB3-221ENST00000636690 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
GABRB3-221ENST00000636690 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
GABRB3-221ENST00000636690 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
GABRB3-221ENST00000636690 ZEB1P37275 1124 aaPredicted RBP11.06□□□□□ -0.64
GABRB3-221ENST00000636690 CSRNP3Q8WYN3 585 aa11.06□□□□□ -0.64
GABRB3-221ENST00000636690 SOGA1O94964 1423 aa11.05□□□□□ -0.64
GABRB3-221ENST00000636690 CFTRP13569 1480 aa11.03□□□□□ -0.64
GABRB3-221ENST00000636690 CEP162Q5TB80 1403 aa11.02□□□□□ -0.64
GABRB3-221ENST00000636690 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
GABRB3-221ENST00000636690 ERICH3Q5RHP9 1530 aa10.98□□□□□ -0.65
GABRB3-221ENST00000636690 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
GABRB3-221ENST00000636690 PRXQ9BXM0 1461 aa10.91□□□□□ -0.66
GABRB3-221ENST00000636690 CUX1P39880 1505 aa10.9□□□□□ -0.66
GABRB3-221ENST00000636690 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.67
GABRB3-221ENST00000636690 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
GABRB3-221ENST00000636690 UBTFP17480 764 aaKnown RBP10.88□□□□□ -0.67
GABRB3-221ENST00000636690 CLIP1P30622 1438 aa10.87□□□□□ -0.67
GABRB3-221ENST00000636690 VPS8Q8N3P4 1428 aa10.87□□□□□ -0.67
GABRB3-221ENST00000636690 CC2D2AQ9P2K1 1620 aa10.85□□□□□ -0.67
GABRB3-221ENST00000636690 RAPGEF2Q9Y4G8 1499 aa10.84□□□□□ -0.67
GABRB3-221ENST00000636690 EHMT2Q96KQ7 1210 aa10.79□□□□□ -0.68
GABRB3-221ENST00000636690 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.69
GABRB3-221ENST00000636690 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
GABRB3-221ENST00000636690 FANCD2Q9BXW9 1451 aa10.75□□□□□ -0.69
GABRB3-221ENST00000636690 FGD5Q6ZNL6 1462 aa10.73□□□□□ -0.69
GABRB3-221ENST00000636690 MAP3K1Q13233 1512 aa10.72□□□□□ -0.69
GABRB3-221ENST00000636690 ABCA10Q8WWZ4 1543 aa10.72□□□□□ -0.69
GABRB3-221ENST00000636690 CUX2O14529 1486 aa10.71□□□□□ -0.69
GABRB3-221ENST00000636690 IGF1RP08069 1367 aa10.71□□□□□ -0.69
GABRB3-221ENST00000636690 APLP2Q06481 763 aa10.71□□□□□ -0.69
GABRB3-221ENST00000636690 ARAP1Q96P48 1450 aa10.71□□□□□ -0.69
GABRB3-221ENST00000636690 PPARGC1BQ86YN6 1023 aaKnown RBP10.7□□□□□ -0.7
GABRB3-221ENST00000636690 CUL7Q14999 1698 aa10.69□□□□□ -0.7
GABRB3-221ENST00000636690 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
GABRB3-221ENST00000636690 CARMIL1Q5VZK9 1371 aa10.66□□□□□ -0.7
GABRB3-221ENST00000636690 PDS5BQ9NTI5 1447 aa10.66□□□□□ -0.7
GABRB3-221ENST00000636690 ARHGAP35Q9NRY4 1499 aa10.65□□□□□ -0.7
GABRB3-221ENST00000636690 EFCAB5A4FU69 1503 aa10.64□□□□□ -0.71
GABRB3-221ENST00000636690 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-221ENST00000636690 CCER1Q8TC90 406 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-221ENST00000636690 CLSPNQ9HAW4 1339 aa10.63□□□□□ -0.71
GABRB3-221ENST00000636690 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
GABRB3-221ENST00000636690 FHAD1B1AJZ9 1412 aa10.63□□□□□ -0.71
GABRB3-221ENST00000636690 RRBP1Q9P2E9 1410 aaKnown RBP10.62□□□□□ -0.71
GABRB3-221ENST00000636690 AQRO60306 1485 aaKnown RBP eCLIP10.6□□□□□ -0.71
GABRB3-221ENST00000636690 ABCA5Q8WWZ7 1642 aa10.58□□□□□ -0.72
GABRB3-221ENST00000636690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-221ENST00000636690 URB2Q14146 1524 aaKnown RBP10.57□□□□□ -0.72
GABRB3-221ENST00000636690 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
GABRB3-221ENST00000636690 NESP48681 1621 aa10.55□□□□□ -0.72
GABRB3-221ENST00000636690 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
GABRB3-221ENST00000636690 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
GABRB3-221ENST00000636690 CFAP43Q8NDM7 1665 aa10.54□□□□□ -0.72
GABRB3-221ENST00000636690 RAD54L2Q9Y4B4 1467 aa10.53□□□□□ -0.72
GABRB3-221ENST00000636690 THOC2Q8NI27 1593 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms