RNA–Protein interactions for RNA: ENST00000636561.1

CNTNAP2-212, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 1,787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-212ENST00000636561 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CNTNAP2-212ENST00000636561 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
CNTNAP2-212ENST00000636561 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
CNTNAP2-212ENST00000636561 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
CNTNAP2-212ENST00000636561 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
CNTNAP2-212ENST00000636561 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
CNTNAP2-212ENST00000636561 FOXD1Q16676 465 aa16.62■□□□□ 0.25
CNTNAP2-212ENST00000636561 MSH5O43196 834 aa15.87■□□□□ 0.13
CNTNAP2-212ENST00000636561 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
CNTNAP2-212ENST00000636561 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
CNTNAP2-212ENST00000636561 ABCC9O60706 1549 aa15.22■□□□□ 0.03
CNTNAP2-212ENST00000636561 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.02
CNTNAP2-212ENST00000636561 ADRA2BP18089 450 aa14.85□□□□□ -0.03
CNTNAP2-212ENST00000636561 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
CNTNAP2-212ENST00000636561 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
CNTNAP2-212ENST00000636561 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
CNTNAP2-212ENST00000636561 NACADO15069 1562 aa14.51□□□□□ -0.09
CNTNAP2-212ENST00000636561 ZCCHC6Q5VYS8 1495 aaKnown RBP14.46□□□□□ -0.09
CNTNAP2-212ENST00000636561 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
CNTNAP2-212ENST00000636561 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
CNTNAP2-212ENST00000636561 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
CNTNAP2-212ENST00000636561 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
CNTNAP2-212ENST00000636561 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
CNTNAP2-212ENST00000636561 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
CNTNAP2-212ENST00000636561 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
CNTNAP2-212ENST00000636561 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
CNTNAP2-212ENST00000636561 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
CNTNAP2-212ENST00000636561 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
CNTNAP2-212ENST00000636561 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
CNTNAP2-212ENST00000636561 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
CNTNAP2-212ENST00000636561 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
CNTNAP2-212ENST00000636561 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
CNTNAP2-212ENST00000636561 SCAF1Q9H7N4 1312 aaKnown RBP13.62□□□□□ -0.23
CNTNAP2-212ENST00000636561 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
CNTNAP2-212ENST00000636561 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
CNTNAP2-212ENST00000636561 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
CNTNAP2-212ENST00000636561 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
CNTNAP2-212ENST00000636561 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
CNTNAP2-212ENST00000636561 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
CNTNAP2-212ENST00000636561 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
CNTNAP2-212ENST00000636561 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
CNTNAP2-212ENST00000636561 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
CNTNAP2-212ENST00000636561 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
CNTNAP2-212ENST00000636561 WIZO95785 1651 aa13.32□□□□□ -0.28
CNTNAP2-212ENST00000636561 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
CNTNAP2-212ENST00000636561 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
CNTNAP2-212ENST00000636561 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
CNTNAP2-212ENST00000636561 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
CNTNAP2-212ENST00000636561 NESP48681 1621 aa13.15□□□□□ -0.3
CNTNAP2-212ENST00000636561 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
CNTNAP2-212ENST00000636561 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
CNTNAP2-212ENST00000636561 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
CNTNAP2-212ENST00000636561 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
CNTNAP2-212ENST00000636561 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
CNTNAP2-212ENST00000636561 CADPSQ9ULU8 1353 aa13□□□□□ -0.33
CNTNAP2-212ENST00000636561 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
CNTNAP2-212ENST00000636561 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
CNTNAP2-212ENST00000636561 POTEHQ6S545 545 aa12.97□□□□□ -0.33
CNTNAP2-212ENST00000636561 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
CNTNAP2-212ENST00000636561 CFTRP13569 1480 aa12.91□□□□□ -0.34
CNTNAP2-212ENST00000636561 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
CNTNAP2-212ENST00000636561 CUX2O14529 1486 aa12.9□□□□□ -0.34
CNTNAP2-212ENST00000636561 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
CNTNAP2-212ENST00000636561 CEP164Q9UPV0 1460 aa12.89□□□□□ -0.35
CNTNAP2-212ENST00000636561 MRC2Q9UBG0 1479 aa12.86□□□□□ -0.35
CNTNAP2-212ENST00000636561 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
CNTNAP2-212ENST00000636561 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
CNTNAP2-212ENST00000636561 WDR62O43379 1518 aa12.8□□□□□ -0.36
CNTNAP2-212ENST00000636561 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
CNTNAP2-212ENST00000636561 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
CNTNAP2-212ENST00000636561 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
CNTNAP2-212ENST00000636561 DNMBPQ6XZF7 1577 aa12.67□□□□□ -0.38
CNTNAP2-212ENST00000636561 ABCC8Q09428 1581 aa12.62□□□□□ -0.39
CNTNAP2-212ENST00000636561 CUX1P39880 1505 aa12.59□□□□□ -0.39
CNTNAP2-212ENST00000636561 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
CNTNAP2-212ENST00000636561 ZNF608Q9ULD9 1512 aaPredicted RBP12.58□□□□□ -0.4
CNTNAP2-212ENST00000636561 POLA1P09884 1462 aaPredicted RBP12.57□□□□□ -0.4
CNTNAP2-212ENST00000636561 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
CNTNAP2-212ENST00000636561 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
CNTNAP2-212ENST00000636561 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
CNTNAP2-212ENST00000636561 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
CNTNAP2-212ENST00000636561 SOGA1O94964 1423 aa12.52□□□□□ -0.41
CNTNAP2-212ENST00000636561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.41
CNTNAP2-212ENST00000636561 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
CNTNAP2-212ENST00000636561 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
CNTNAP2-212ENST00000636561 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.41
CNTNAP2-212ENST00000636561 WRNQ14191 1432 aaPredicted RBP eCLIP12.5□□□□□ -0.41
CNTNAP2-212ENST00000636561 TDRD9Q8NDG6 1382 aaKnown RBP12.48□□□□□ -0.41
CNTNAP2-212ENST00000636561 TOP2BQ02880 1626 aa12.47□□□□□ -0.41
CNTNAP2-212ENST00000636561 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
CNTNAP2-212ENST00000636561 WDR97A6NE52 1622 aa12.46□□□□□ -0.42
CNTNAP2-212ENST00000636561 FBLN2P98095 1184 aa12.43□□□□□ -0.42
CNTNAP2-212ENST00000636561 CHD1O14646 1710 aa12.42□□□□□ -0.42
CNTNAP2-212ENST00000636561 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
CNTNAP2-212ENST00000636561 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
CNTNAP2-212ENST00000636561 ABCA10Q8WWZ4 1543 aa12.39□□□□□ -0.43
CNTNAP2-212ENST00000636561 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
CNTNAP2-212ENST00000636561 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
CNTNAP2-212ENST00000636561 GAPVD1Q14C86 1478 aa12.38□□□□□ -0.43
CNTNAP2-212ENST00000636561 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms