RNA–Protein interactions for RNA: ENST00000636539.1

ARHGEF9-227, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5

Gene ARHGEF9, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-227ENST00000636539 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
ARHGEF9-227ENST00000636539 ABCC9O60706 1549 aa21.24■□□□□ 0.99
ARHGEF9-227ENST00000636539 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
ARHGEF9-227ENST00000636539 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
ARHGEF9-227ENST00000636539 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
ARHGEF9-227ENST00000636539 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
ARHGEF9-227ENST00000636539 NACADO15069 1562 aa20.07■□□□□ 0.8
ARHGEF9-227ENST00000636539 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.79
ARHGEF9-227ENST00000636539 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
ARHGEF9-227ENST00000636539 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
ARHGEF9-227ENST00000636539 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
ARHGEF9-227ENST00000636539 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
ARHGEF9-227ENST00000636539 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
ARHGEF9-227ENST00000636539 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
ARHGEF9-227ENST00000636539 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
ARHGEF9-227ENST00000636539 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
ARHGEF9-227ENST00000636539 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
ARHGEF9-227ENST00000636539 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
ARHGEF9-227ENST00000636539 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
ARHGEF9-227ENST00000636539 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF9-227ENST00000636539 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF9-227ENST00000636539 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
ARHGEF9-227ENST00000636539 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
ARHGEF9-227ENST00000636539 WIZO95785 1651 aa18.54■□□□□ 0.56
ARHGEF9-227ENST00000636539 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
ARHGEF9-227ENST00000636539 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
ARHGEF9-227ENST00000636539 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
ARHGEF9-227ENST00000636539 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
ARHGEF9-227ENST00000636539 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
ARHGEF9-227ENST00000636539 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.53
ARHGEF9-227ENST00000636539 CUX2O14529 1486 aa18.38■□□□□ 0.53
ARHGEF9-227ENST00000636539 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
ARHGEF9-227ENST00000636539 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
ARHGEF9-227ENST00000636539 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
ARHGEF9-227ENST00000636539 NESP48681 1621 aa18.19■□□□□ 0.5
ARHGEF9-227ENST00000636539 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
ARHGEF9-227ENST00000636539 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
ARHGEF9-227ENST00000636539 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
ARHGEF9-227ENST00000636539 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
ARHGEF9-227ENST00000636539 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
ARHGEF9-227ENST00000636539 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
ARHGEF9-227ENST00000636539 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
ARHGEF9-227ENST00000636539 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
ARHGEF9-227ENST00000636539 TRIM41Q8WV44 630 aa17.82■□□□□ 0.44
ARHGEF9-227ENST00000636539 CFTRP13569 1480 aa17.8■□□□□ 0.44
ARHGEF9-227ENST00000636539 WDR62O43379 1518 aa17.79■□□□□ 0.44
ARHGEF9-227ENST00000636539 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
ARHGEF9-227ENST00000636539 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
ARHGEF9-227ENST00000636539 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
ARHGEF9-227ENST00000636539 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
ARHGEF9-227ENST00000636539 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
ARHGEF9-227ENST00000636539 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
ARHGEF9-227ENST00000636539 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
ARHGEF9-227ENST00000636539 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
ARHGEF9-227ENST00000636539 TOP2BQ02880 1626 aa17.52■□□□□ 0.4
ARHGEF9-227ENST00000636539 CUX1P39880 1505 aa17.51■□□□□ 0.39
ARHGEF9-227ENST00000636539 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
ARHGEF9-227ENST00000636539 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF9-227ENST00000636539 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
ARHGEF9-227ENST00000636539 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
ARHGEF9-227ENST00000636539 SOGA1O94964 1423 aa17.4■□□□□ 0.38
ARHGEF9-227ENST00000636539 EEA1Q15075 1411 aa17.38■□□□□ 0.37
ARHGEF9-227ENST00000636539 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
ARHGEF9-227ENST00000636539 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF9-227ENST00000636539 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
ARHGEF9-227ENST00000636539 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
ARHGEF9-227ENST00000636539 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
ARHGEF9-227ENST00000636539 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
ARHGEF9-227ENST00000636539 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF9-227ENST00000636539 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
ARHGEF9-227ENST00000636539 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
ARHGEF9-227ENST00000636539 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
ARHGEF9-227ENST00000636539 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
ARHGEF9-227ENST00000636539 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
ARHGEF9-227ENST00000636539 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
ARHGEF9-227ENST00000636539 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.35
ARHGEF9-227ENST00000636539 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
ARHGEF9-227ENST00000636539 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
ARHGEF9-227ENST00000636539 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
ARHGEF9-227ENST00000636539 FBLN2P98095 1184 aa17.2■□□□□ 0.34
ARHGEF9-227ENST00000636539 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
ARHGEF9-227ENST00000636539 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
ARHGEF9-227ENST00000636539 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
ARHGEF9-227ENST00000636539 KIF21BO75037 1637 aa17.14■□□□□ 0.33
ARHGEF9-227ENST00000636539 CHD1O14646 1710 aa17.13■□□□□ 0.33
ARHGEF9-227ENST00000636539 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
ARHGEF9-227ENST00000636539 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
ARHGEF9-227ENST00000636539 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
ARHGEF9-227ENST00000636539 IGF1RP08069 1367 aa17.08■□□□□ 0.32
ARHGEF9-227ENST00000636539 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF9-227ENST00000636539 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
ARHGEF9-227ENST00000636539 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
ARHGEF9-227ENST00000636539 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
ARHGEF9-227ENST00000636539 ERICH3Q5RHP9 1530 aa17.05■□□□□ 0.32
ARHGEF9-227ENST00000636539 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
ARHGEF9-227ENST00000636539 ABCA5Q8WWZ7 1642 aa17.04■□□□□ 0.32
ARHGEF9-227ENST00000636539 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF9-227ENST00000636539 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
ARHGEF9-227ENST00000636539 MAGI1Q96QZ7 1491 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF9-227ENST00000636539 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms