RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-223ENST00000636102 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
ARHGEF9-223ENST00000636102 CCDC180Q9P1Z9 1646 aa20.43■□□□□ 0.86
ARHGEF9-223ENST00000636102 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
ARHGEF9-223ENST00000636102 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
ARHGEF9-223ENST00000636102 ABCC9O60706 1549 aa19.65■□□□□ 0.74
ARHGEF9-223ENST00000636102 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.7
ARHGEF9-223ENST00000636102 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
ARHGEF9-223ENST00000636102 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
ARHGEF9-223ENST00000636102 NACADO15069 1562 aa19.15■□□□□ 0.66
ARHGEF9-223ENST00000636102 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.63
ARHGEF9-223ENST00000636102 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
ARHGEF9-223ENST00000636102 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
ARHGEF9-223ENST00000636102 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.55
ARHGEF9-223ENST00000636102 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
ARHGEF9-223ENST00000636102 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
ARHGEF9-223ENST00000636102 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
ARHGEF9-223ENST00000636102 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF9-223ENST00000636102 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
ARHGEF9-223ENST00000636102 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF9-223ENST00000636102 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
ARHGEF9-223ENST00000636102 WIZO95785 1651 aa17.99■□□□□ 0.47
ARHGEF9-223ENST00000636102 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
ARHGEF9-223ENST00000636102 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
ARHGEF9-223ENST00000636102 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
ARHGEF9-223ENST00000636102 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
ARHGEF9-223ENST00000636102 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
ARHGEF9-223ENST00000636102 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
ARHGEF9-223ENST00000636102 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
ARHGEF9-223ENST00000636102 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
ARHGEF9-223ENST00000636102 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
ARHGEF9-223ENST00000636102 HRCP23327 699 aa17.66■□□□□ 0.42
ARHGEF9-223ENST00000636102 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
ARHGEF9-223ENST00000636102 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
ARHGEF9-223ENST00000636102 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
ARHGEF9-223ENST00000636102 PELP1Q8IZL8 1130 aaKnown RBP17.56■□□□□ 0.4
ARHGEF9-223ENST00000636102 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
ARHGEF9-223ENST00000636102 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
ARHGEF9-223ENST00000636102 CFTRP13569 1480 aa17.31■□□□□ 0.36
ARHGEF9-223ENST00000636102 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
ARHGEF9-223ENST00000636102 NESP48681 1621 aa17.21■□□□□ 0.35
ARHGEF9-223ENST00000636102 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
ARHGEF9-223ENST00000636102 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
ARHGEF9-223ENST00000636102 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
ARHGEF9-223ENST00000636102 FAM9AQ8IZU1 332 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF9-223ENST00000636102 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
ARHGEF9-223ENST00000636102 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
ARHGEF9-223ENST00000636102 MYT1Q01538 1121 aa17.03■□□□□ 0.32
ARHGEF9-223ENST00000636102 CUX1P39880 1505 aa17.01■□□□□ 0.31
ARHGEF9-223ENST00000636102 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
ARHGEF9-223ENST00000636102 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
ARHGEF9-223ENST00000636102 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
ARHGEF9-223ENST00000636102 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
ARHGEF9-223ENST00000636102 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
ARHGEF9-223ENST00000636102 SOGA1O94964 1423 aa16.96■□□□□ 0.31
ARHGEF9-223ENST00000636102 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
ARHGEF9-223ENST00000636102 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
ARHGEF9-223ENST00000636102 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
ARHGEF9-223ENST00000636102 URB2Q14146 1524 aaKnown RBP16.89■□□□□ 0.29
ARHGEF9-223ENST00000636102 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
ARHGEF9-223ENST00000636102 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
ARHGEF9-223ENST00000636102 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
ARHGEF9-223ENST00000636102 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
ARHGEF9-223ENST00000636102 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
ARHGEF9-223ENST00000636102 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
ARHGEF9-223ENST00000636102 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
ARHGEF9-223ENST00000636102 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
ARHGEF9-223ENST00000636102 EEA1Q15075 1411 aa16.8■□□□□ 0.28
ARHGEF9-223ENST00000636102 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF9-223ENST00000636102 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
ARHGEF9-223ENST00000636102 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF9-223ENST00000636102 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
ARHGEF9-223ENST00000636102 CUX2O14529 1486 aa16.74■□□□□ 0.27
ARHGEF9-223ENST00000636102 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
ARHGEF9-223ENST00000636102 WDR62O43379 1518 aa16.68■□□□□ 0.26
ARHGEF9-223ENST00000636102 ABCA10Q8WWZ4 1543 aa16.68■□□□□ 0.26
ARHGEF9-223ENST00000636102 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF9-223ENST00000636102 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
ARHGEF9-223ENST00000636102 IGF1RP08069 1367 aa16.67■□□□□ 0.26
ARHGEF9-223ENST00000636102 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
ARHGEF9-223ENST00000636102 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
ARHGEF9-223ENST00000636102 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
ARHGEF9-223ENST00000636102 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
ARHGEF9-223ENST00000636102 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
ARHGEF9-223ENST00000636102 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
ARHGEF9-223ENST00000636102 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
ARHGEF9-223ENST00000636102 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
ARHGEF9-223ENST00000636102 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
ARHGEF9-223ENST00000636102 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
ARHGEF9-223ENST00000636102 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF9-223ENST00000636102 TNIKQ9UKE5 1360 aa16.55■□□□□ 0.24
ARHGEF9-223ENST00000636102 KIF21BO75037 1637 aa16.53■□□□□ 0.24
ARHGEF9-223ENST00000636102 WDR97A6NE52 1622 aa16.52■□□□□ 0.24
ARHGEF9-223ENST00000636102 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
ARHGEF9-223ENST00000636102 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF9-223ENST00000636102 ERICH3Q5RHP9 1530 aa16.47■□□□□ 0.23
ARHGEF9-223ENST00000636102 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
ARHGEF9-223ENST00000636102 CEP162Q5TB80 1403 aa16.44■□□□□ 0.22
ARHGEF9-223ENST00000636102 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
ARHGEF9-223ENST00000636102 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
ARHGEF9-223ENST00000636102 CUL7Q14999 1698 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms