RNA–Protein interactions for RNA: ENST00000636072.1

ARID1A-210, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 5

Gene ARID1A, Length 1,128 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-210ENST00000636072 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
ARID1A-210ENST00000636072 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
ARID1A-210ENST00000636072 ABCC9O60706 1549 aa30.54■■■□□ 2.48
ARID1A-210ENST00000636072 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
ARID1A-210ENST00000636072 NACADO15069 1562 aa29.39■■■□□ 2.3
ARID1A-210ENST00000636072 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
ARID1A-210ENST00000636072 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
ARID1A-210ENST00000636072 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
ARID1A-210ENST00000636072 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
ARID1A-210ENST00000636072 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
ARID1A-210ENST00000636072 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
ARID1A-210ENST00000636072 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
ARID1A-210ENST00000636072 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
ARID1A-210ENST00000636072 SHROOM4Q9ULL8 1493 aa28.15■■■□□ 2.1
ARID1A-210ENST00000636072 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
ARID1A-210ENST00000636072 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
ARID1A-210ENST00000636072 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
ARID1A-210ENST00000636072 CECR2Q9BXF3 1484 aa27.51■■■□□ 2
ARID1A-210ENST00000636072 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
ARID1A-210ENST00000636072 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
ARID1A-210ENST00000636072 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
ARID1A-210ENST00000636072 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
ARID1A-210ENST00000636072 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
ARID1A-210ENST00000636072 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
ARID1A-210ENST00000636072 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.92
ARID1A-210ENST00000636072 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
ARID1A-210ENST00000636072 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.91
ARID1A-210ENST00000636072 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
ARID1A-210ENST00000636072 WIZO95785 1651 aa26.87■■□□□ 1.89
ARID1A-210ENST00000636072 TOP2AP11388 1531 aaKnown RBP26.58■■□□□ 1.85
ARID1A-210ENST00000636072 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
ARID1A-210ENST00000636072 NESP48681 1621 aa26.45■■□□□ 1.82
ARID1A-210ENST00000636072 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
ARID1A-210ENST00000636072 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
ARID1A-210ENST00000636072 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
ARID1A-210ENST00000636072 ERCC6Q03468 1493 aa26.31■■□□□ 1.8
ARID1A-210ENST00000636072 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
ARID1A-210ENST00000636072 CFTRP13569 1480 aa26.25■■□□□ 1.79
ARID1A-210ENST00000636072 FANCD2Q9BXW9 1451 aa26.07■■□□□ 1.76
ARID1A-210ENST00000636072 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
ARID1A-210ENST00000636072 CEP164Q9UPV0 1460 aa25.99■■□□□ 1.75
ARID1A-210ENST00000636072 CUX2O14529 1486 aa25.96■■□□□ 1.75
ARID1A-210ENST00000636072 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
ARID1A-210ENST00000636072 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
ARID1A-210ENST00000636072 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
ARID1A-210ENST00000636072 WDR62O43379 1518 aa25.79■■□□□ 1.72
ARID1A-210ENST00000636072 URB2Q14146 1524 aaKnown RBP25.77■■□□□ 1.72
ARID1A-210ENST00000636072 ABCC8Q09428 1581 aa25.71■■□□□ 1.71
ARID1A-210ENST00000636072 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
ARID1A-210ENST00000636072 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.69
ARID1A-210ENST00000636072 CUX1P39880 1505 aa25.48■■□□□ 1.67
ARID1A-210ENST00000636072 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
ARID1A-210ENST00000636072 SOGA1O94964 1423 aa25.44■■□□□ 1.66
ARID1A-210ENST00000636072 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
ARID1A-210ENST00000636072 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
ARID1A-210ENST00000636072 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
ARID1A-210ENST00000636072 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
ARID1A-210ENST00000636072 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
ARID1A-210ENST00000636072 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
ARID1A-210ENST00000636072 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
ARID1A-210ENST00000636072 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.647e-7■■■■■ 61.5
ARID1A-210ENST00000636072 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
ARID1A-210ENST00000636072 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
ARID1A-210ENST00000636072 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
ARID1A-210ENST00000636072 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
ARID1A-210ENST00000636072 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
ARID1A-210ENST00000636072 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
ARID1A-210ENST00000636072 OSCARQ8IYS5 282 aa25.11■■□□□ 1.61
ARID1A-210ENST00000636072 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
ARID1A-210ENST00000636072 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
ARID1A-210ENST00000636072 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
ARID1A-210ENST00000636072 GRIN2BQ13224 1484 aa25.06■■□□□ 1.6
ARID1A-210ENST00000636072 FBLN2P98095 1184 aa25.05■■□□□ 1.6
ARID1A-210ENST00000636072 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
ARID1A-210ENST00000636072 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
ARID1A-210ENST00000636072 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
ARID1A-210ENST00000636072 MAGI1Q96QZ7 1491 aaPredicted RBP24.94■■□□□ 1.58
ARID1A-210ENST00000636072 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
ARID1A-210ENST00000636072 SYNJ2O15056 1496 aa24.86■■□□□ 1.57
ARID1A-210ENST00000636072 IGF1RP08069 1367 aa24.86■■□□□ 1.57
ARID1A-210ENST00000636072 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
ARID1A-210ENST00000636072 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
ARID1A-210ENST00000636072 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
ARID1A-210ENST00000636072 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
ARID1A-210ENST00000636072 CHD1O14646 1710 aa24.78■■□□□ 1.56
ARID1A-210ENST00000636072 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
ARID1A-210ENST00000636072 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
ARID1A-210ENST00000636072 ADAMTS12P58397 1594 aa24.7■■□□□ 1.54
ARID1A-210ENST00000636072 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
ARID1A-210ENST00000636072 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
ARID1A-210ENST00000636072 NUP160Q12769 1436 aa24.6■■□□□ 1.53
ARID1A-210ENST00000636072 CUL7Q14999 1698 aa24.57■■□□□ 1.52
ARID1A-210ENST00000636072 CLASP1Q7Z460 1538 aa24.56■■□□□ 1.52
ARID1A-210ENST00000636072 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
ARID1A-210ENST00000636072 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
ARID1A-210ENST00000636072 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
ARID1A-210ENST00000636072 EEA1Q15075 1411 aa24.51■■□□□ 1.51
ARID1A-210ENST00000636072 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
ARID1A-210ENST00000636072 ARHGEF11O15085 1522 aa24.49■■□□□ 1.51
ARID1A-210ENST00000636072 CYB5RLQ6IPT4 315 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms