RNA–Protein interactions for RNA: ENST00000635911.1

EFHC1-210, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 3,509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-210ENST00000635911 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
EFHC1-210ENST00000635911 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
EFHC1-210ENST00000635911 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
EFHC1-210ENST00000635911 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
EFHC1-210ENST00000635911 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
EFHC1-210ENST00000635911 ABCC9O60706 1549 aa19.33■□□□□ 0.69
EFHC1-210ENST00000635911 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
EFHC1-210ENST00000635911 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
EFHC1-210ENST00000635911 SCRIBQ14160 1630 aa18.84■□□□□ 0.61
EFHC1-210ENST00000635911 NACADO15069 1562 aa18.76■□□□□ 0.59
EFHC1-210ENST00000635911 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
EFHC1-210ENST00000635911 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
EFHC1-210ENST00000635911 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
EFHC1-210ENST00000635911 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
EFHC1-210ENST00000635911 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
EFHC1-210ENST00000635911 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
EFHC1-210ENST00000635911 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
EFHC1-210ENST00000635911 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
EFHC1-210ENST00000635911 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
EFHC1-210ENST00000635911 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
EFHC1-210ENST00000635911 WIZO95785 1651 aa18.01■□□□□ 0.47
EFHC1-210ENST00000635911 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
EFHC1-210ENST00000635911 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
EFHC1-210ENST00000635911 TOP2AP11388 1531 aaKnown RBP17.7■□□□□ 0.42
EFHC1-210ENST00000635911 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
EFHC1-210ENST00000635911 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
EFHC1-210ENST00000635911 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
EFHC1-210ENST00000635911 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
EFHC1-210ENST00000635911 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
EFHC1-210ENST00000635911 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
EFHC1-210ENST00000635911 SMARCA2P51531 1590 aa17.58■□□□□ 0.4
EFHC1-210ENST00000635911 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
EFHC1-210ENST00000635911 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
EFHC1-210ENST00000635911 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
EFHC1-210ENST00000635911 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
EFHC1-210ENST00000635911 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
EFHC1-210ENST00000635911 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
EFHC1-210ENST00000635911 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
EFHC1-210ENST00000635911 SOGA1O94964 1423 aa17.18■□□□□ 0.34
EFHC1-210ENST00000635911 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
EFHC1-210ENST00000635911 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
EFHC1-210ENST00000635911 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
EFHC1-210ENST00000635911 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
EFHC1-210ENST00000635911 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
EFHC1-210ENST00000635911 CADPSQ9ULU8 1353 aa17.08■□□□□ 0.32
EFHC1-210ENST00000635911 CFTRP13569 1480 aa17.08■□□□□ 0.32
EFHC1-210ENST00000635911 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
EFHC1-210ENST00000635911 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
EFHC1-210ENST00000635911 NESP48681 1621 aa16.98■□□□□ 0.31
EFHC1-210ENST00000635911 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
EFHC1-210ENST00000635911 EEA1Q15075 1411 aa16.95■□□□□ 0.3
EFHC1-210ENST00000635911 CUX1P39880 1505 aa16.93■□□□□ 0.3
EFHC1-210ENST00000635911 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
EFHC1-210ENST00000635911 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
EFHC1-210ENST00000635911 TTBK1Q5TCY1 1321 aaPredicted RBP16.89■□□□□ 0.29
EFHC1-210ENST00000635911 GOLGA3Q08378 1498 aa16.83■□□□□ 0.29
EFHC1-210ENST00000635911 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
EFHC1-210ENST00000635911 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
EFHC1-210ENST00000635911 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
EFHC1-210ENST00000635911 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
EFHC1-210ENST00000635911 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
EFHC1-210ENST00000635911 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
EFHC1-210ENST00000635911 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
EFHC1-210ENST00000635911 CUX2O14529 1486 aa16.78■□□□□ 0.28
EFHC1-210ENST00000635911 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
EFHC1-210ENST00000635911 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
EFHC1-210ENST00000635911 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
EFHC1-210ENST00000635911 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
EFHC1-210ENST00000635911 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
EFHC1-210ENST00000635911 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
EFHC1-210ENST00000635911 CLIP1P30622 1438 aa16.67■□□□□ 0.26
EFHC1-210ENST00000635911 KIF21BO75037 1637 aa16.67■□□□□ 0.26
EFHC1-210ENST00000635911 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
EFHC1-210ENST00000635911 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
EFHC1-210ENST00000635911 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
EFHC1-210ENST00000635911 IGF1RP08069 1367 aa16.64■□□□□ 0.25
EFHC1-210ENST00000635911 PRXQ9BXM0 1461 aa16.62■□□□□ 0.25
EFHC1-210ENST00000635911 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
EFHC1-210ENST00000635911 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
EFHC1-210ENST00000635911 APLP2Q06481 763 aa16.6■□□□□ 0.25
EFHC1-210ENST00000635911 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.25
EFHC1-210ENST00000635911 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
EFHC1-210ENST00000635911 P3H3Q8IVL6 736 aa16.53■□□□□ 0.24
EFHC1-210ENST00000635911 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
EFHC1-210ENST00000635911 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
EFHC1-210ENST00000635911 HRCP23327 699 aa16.5■□□□□ 0.23
EFHC1-210ENST00000635911 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
EFHC1-210ENST00000635911 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
EFHC1-210ENST00000635911 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
EFHC1-210ENST00000635911 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
EFHC1-210ENST00000635911 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
EFHC1-210ENST00000635911 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
EFHC1-210ENST00000635911 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
EFHC1-210ENST00000635911 FBLN2P98095 1184 aa16.35■□□□□ 0.21
EFHC1-210ENST00000635911 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
EFHC1-210ENST00000635911 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
EFHC1-210ENST00000635911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
EFHC1-210ENST00000635911 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
EFHC1-210ENST00000635911 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
EFHC1-210ENST00000635911 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms