RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
SSRP1-205ENST00000635721 CCDC180Q9P1Z9 1646 aa14.9□□□□□ -0.02
SSRP1-205ENST00000635721 ABCC9O60706 1549 aa14.41□□□□□ -0.1
SSRP1-205ENST00000635721 ZCCHC6Q5VYS8 1495 aaKnown RBP14.16□□□□□ -0.14
SSRP1-205ENST00000635721 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
SSRP1-205ENST00000635721 DCAF1Q9Y4B6 1507 aa13.96□□□□□ -0.17
SSRP1-205ENST00000635721 NACADO15069 1562 aa13.93□□□□□ -0.18
SSRP1-205ENST00000635721 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
SSRP1-205ENST00000635721 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
SSRP1-205ENST00000635721 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
SSRP1-205ENST00000635721 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
SSRP1-205ENST00000635721 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
SSRP1-205ENST00000635721 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
SSRP1-205ENST00000635721 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
SSRP1-205ENST00000635721 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
SSRP1-205ENST00000635721 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
SSRP1-205ENST00000635721 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
SSRP1-205ENST00000635721 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
SSRP1-205ENST00000635721 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
SSRP1-205ENST00000635721 DNAJC5BQ9UF47 199 aa13.07□□□□□ -0.32
SSRP1-205ENST00000635721 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
SSRP1-205ENST00000635721 WIZO95785 1651 aa13.04□□□□□ -0.32
SSRP1-205ENST00000635721 CC2D2AQ9P2K1 1620 aa13.03□□□□□ -0.32
SSRP1-205ENST00000635721 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
SSRP1-205ENST00000635721 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.34
SSRP1-205ENST00000635721 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
SSRP1-205ENST00000635721 AEBP2Q6ZN18 517 aaPredicted RBP12.9□□□□□ -0.34
SSRP1-205ENST00000635721 SMARCA2P51531 1590 aa12.9□□□□□ -0.35
SSRP1-205ENST00000635721 NCAPD3P42695 1498 aa12.87□□□□□ -0.35
SSRP1-205ENST00000635721 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
SSRP1-205ENST00000635721 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
SSRP1-205ENST00000635721 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
SSRP1-205ENST00000635721 HRCP23327 699 aa12.75□□□□□ -0.37
SSRP1-205ENST00000635721 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
SSRP1-205ENST00000635721 NESP48681 1621 aa12.59□□□□□ -0.39
SSRP1-205ENST00000635721 CADPSQ9ULU8 1353 aa12.53□□□□□ -0.4
SSRP1-205ENST00000635721 CFTRP13569 1480 aa12.51□□□□□ -0.41
SSRP1-205ENST00000635721 CHIC1Q5VXU3 224 aa12.5□□□□□ -0.41
SSRP1-205ENST00000635721 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
SSRP1-205ENST00000635721 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
SSRP1-205ENST00000635721 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
SSRP1-205ENST00000635721 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
SSRP1-205ENST00000635721 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.43
SSRP1-205ENST00000635721 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
SSRP1-205ENST00000635721 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
SSRP1-205ENST00000635721 ERCC6Q03468 1493 aa12.33□□□□□ -0.44
SSRP1-205ENST00000635721 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
SSRP1-205ENST00000635721 ZEB1P37275 1124 aaPredicted RBP12.3□□□□□ -0.44
SSRP1-205ENST00000635721 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
SSRP1-205ENST00000635721 CUX1P39880 1505 aa12.28□□□□□ -0.44
SSRP1-205ENST00000635721 SYNJ1O43426 1573 aa12.27□□□□□ -0.44
SSRP1-205ENST00000635721 THOC2Q8NI27 1593 aaKnown RBP12.27□□□□□ -0.44
SSRP1-205ENST00000635721 WRNQ14191 1432 aaPredicted RBP eCLIP12.26□□□□□ -0.45
SSRP1-205ENST00000635721 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
SSRP1-205ENST00000635721 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
SSRP1-205ENST00000635721 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
SSRP1-205ENST00000635721 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
SSRP1-205ENST00000635721 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
SSRP1-205ENST00000635721 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
SSRP1-205ENST00000635721 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
SSRP1-205ENST00000635721 WDR62O43379 1518 aa12.21□□□□□ -0.46
SSRP1-205ENST00000635721 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
SSRP1-205ENST00000635721 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
SSRP1-205ENST00000635721 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
SSRP1-205ENST00000635721 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
SSRP1-205ENST00000635721 CUX2O14529 1486 aa12.14□□□□□ -0.47
SSRP1-205ENST00000635721 SOGA1O94964 1423 aa12.11□□□□□ -0.47
SSRP1-205ENST00000635721 TARBP1Q13395 1621 aaKnown RBP12.1□□□□□ -0.47
SSRP1-205ENST00000635721 MYT1Q01538 1121 aa12.09□□□□□ -0.47
SSRP1-205ENST00000635721 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
SSRP1-205ENST00000635721 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
SSRP1-205ENST00000635721 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
SSRP1-205ENST00000635721 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
SSRP1-205ENST00000635721 IFT140Q96RY7 1462 aa12.04□□□□□ -0.48
SSRP1-205ENST00000635721 PPARGC1BQ86YN6 1023 aaKnown RBP12.04□□□□□ -0.48
SSRP1-205ENST00000635721 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
SSRP1-205ENST00000635721 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.482e-12■■■■■ 30.9
SSRP1-205ENST00000635721 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
SSRP1-205ENST00000635721 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
SSRP1-205ENST00000635721 EIF4G3O43432 1585 aaKnown RBP11.98□□□□□ -0.49
SSRP1-205ENST00000635721 PBRM1Q86U86 1689 aa11.97□□□□□ -0.49
SSRP1-205ENST00000635721 GAPVD1Q14C86 1478 aa11.96□□□□□ -0.49
SSRP1-205ENST00000635721 KIF27Q86VH2 1401 aa11.95□□□□□ -0.5
SSRP1-205ENST00000635721 IGF1RP08069 1367 aa11.93□□□□□ -0.5
SSRP1-205ENST00000635721 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
SSRP1-205ENST00000635721 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
SSRP1-205ENST00000635721 LOC105371045A0A1W2PR82 267 aa11.9□□□□□ -0.5
SSRP1-205ENST00000635721 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
SSRP1-205ENST00000635721 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
SSRP1-205ENST00000635721 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
SSRP1-205ENST00000635721 EEA1Q15075 1411 aa11.86□□□□□ -0.51
SSRP1-205ENST00000635721 CARMIL1Q5VZK9 1371 aa11.86□□□□□ -0.51
SSRP1-205ENST00000635721 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
SSRP1-205ENST00000635721 CHD1O14646 1710 aa11.83□□□□□ -0.52
SSRP1-205ENST00000635721 CUL7Q14999 1698 aa11.83□□□□□ -0.52
SSRP1-205ENST00000635721 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
SSRP1-205ENST00000635721 FBLN2P98095 1184 aa11.82□□□□□ -0.52
SSRP1-205ENST00000635721 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
SSRP1-205ENST00000635721 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
SSRP1-205ENST00000635721 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms