RNA–Protein interactions for RNA: ENST00000635618.1

CARMIL1-205, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 5

Gene CARMIL1, Length 3,201 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-205ENST00000635618 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
CARMIL1-205ENST00000635618 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
CARMIL1-205ENST00000635618 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
CARMIL1-205ENST00000635618 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
CARMIL1-205ENST00000635618 ZCCHC6Q5VYS8 1495 aaKnown RBP14.59□□□□□ -0.07
CARMIL1-205ENST00000635618 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
CARMIL1-205ENST00000635618 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
CARMIL1-205ENST00000635618 ABCC9O60706 1549 aa14.16□□□□□ -0.14
CARMIL1-205ENST00000635618 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
CARMIL1-205ENST00000635618 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
CARMIL1-205ENST00000635618 NACADO15069 1562 aa13.91□□□□□ -0.18
CARMIL1-205ENST00000635618 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
CARMIL1-205ENST00000635618 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
CARMIL1-205ENST00000635618 CHIC1Q5VXU3 224 aa13.56□□□□□ -0.24
CARMIL1-205ENST00000635618 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
CARMIL1-205ENST00000635618 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
CARMIL1-205ENST00000635618 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
CARMIL1-205ENST00000635618 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
CARMIL1-205ENST00000635618 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
CARMIL1-205ENST00000635618 WIZO95785 1651 aa13.36□□□□□ -0.27
CARMIL1-205ENST00000635618 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
CARMIL1-205ENST00000635618 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
CARMIL1-205ENST00000635618 TRIM41Q8WV44 630 aa13.28□□□□□ -0.28
CARMIL1-205ENST00000635618 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
CARMIL1-205ENST00000635618 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
CARMIL1-205ENST00000635618 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
CARMIL1-205ENST00000635618 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
CARMIL1-205ENST00000635618 SMARCA2P51531 1590 aa13.06□□□□□ -0.32
CARMIL1-205ENST00000635618 ATAD2BQ9ULI0 1458 aa13.05□□□□□ -0.32
CARMIL1-205ENST00000635618 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
CARMIL1-205ENST00000635618 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
CARMIL1-205ENST00000635618 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.32
CARMIL1-205ENST00000635618 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
CARMIL1-205ENST00000635618 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
CARMIL1-205ENST00000635618 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
CARMIL1-205ENST00000635618 PCGF6Q9BYE7 350 aa12.84□□□□□ -0.35
CARMIL1-205ENST00000635618 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
CARMIL1-205ENST00000635618 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
CARMIL1-205ENST00000635618 SOGA1O94964 1423 aa12.77□□□□□ -0.37
CARMIL1-205ENST00000635618 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
CARMIL1-205ENST00000635618 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
CARMIL1-205ENST00000635618 EEA1Q15075 1411 aa12.72□□□□□ -0.37
CARMIL1-205ENST00000635618 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
CARMIL1-205ENST00000635618 HRCP23327 699 aa12.71□□□□□ -0.37
CARMIL1-205ENST00000635618 SYNJ1O43426 1573 aa12.71□□□□□ -0.38
CARMIL1-205ENST00000635618 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
CARMIL1-205ENST00000635618 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
CARMIL1-205ENST00000635618 CFTRP13569 1480 aa12.65□□□□□ -0.38
CARMIL1-205ENST00000635618 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
CARMIL1-205ENST00000635618 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
CARMIL1-205ENST00000635618 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
CARMIL1-205ENST00000635618 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
CARMIL1-205ENST00000635618 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
CARMIL1-205ENST00000635618 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
CARMIL1-205ENST00000635618 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
CARMIL1-205ENST00000635618 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
CARMIL1-205ENST00000635618 CUX1P39880 1505 aa12.55□□□□□ -0.4
CARMIL1-205ENST00000635618 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
CARMIL1-205ENST00000635618 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
CARMIL1-205ENST00000635618 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
CARMIL1-205ENST00000635618 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
CARMIL1-205ENST00000635618 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
CARMIL1-205ENST00000635618 KIF21BO75037 1637 aa12.49□□□□□ -0.41
CARMIL1-205ENST00000635618 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
CARMIL1-205ENST00000635618 NESP48681 1621 aa12.47□□□□□ -0.41
CARMIL1-205ENST00000635618 CLIP1P30622 1438 aa12.45□□□□□ -0.42
CARMIL1-205ENST00000635618 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
CARMIL1-205ENST00000635618 CUX2O14529 1486 aa12.44□□□□□ -0.42
CARMIL1-205ENST00000635618 APLP2Q06481 763 aa12.43□□□□□ -0.42
CARMIL1-205ENST00000635618 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
CARMIL1-205ENST00000635618 PRXQ9BXM0 1461 aa12.39□□□□□ -0.43
CARMIL1-205ENST00000635618 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
CARMIL1-205ENST00000635618 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
CARMIL1-205ENST00000635618 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
CARMIL1-205ENST00000635618 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
CARMIL1-205ENST00000635618 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
CARMIL1-205ENST00000635618 IGF1RP08069 1367 aa12.34□□□□□ -0.43
CARMIL1-205ENST00000635618 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.44
CARMIL1-205ENST00000635618 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
CARMIL1-205ENST00000635618 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
CARMIL1-205ENST00000635618 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
CARMIL1-205ENST00000635618 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
CARMIL1-205ENST00000635618 URB2Q14146 1524 aaKnown RBP12.28□□□□□ -0.44
CARMIL1-205ENST00000635618 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
CARMIL1-205ENST00000635618 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
CARMIL1-205ENST00000635618 CCER1Q8TC90 406 aaPredicted RBP12.25□□□□□ -0.45
CARMIL1-205ENST00000635618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.24□□□□□ -0.45
CARMIL1-205ENST00000635618 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
CARMIL1-205ENST00000635618 ARAP1Q96P48 1450 aa12.21□□□□□ -0.45
CARMIL1-205ENST00000635618 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
CARMIL1-205ENST00000635618 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
CARMIL1-205ENST00000635618 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
CARMIL1-205ENST00000635618 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
CARMIL1-205ENST00000635618 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
CARMIL1-205ENST00000635618 GAPVD1Q14C86 1478 aa12.18□□□□□ -0.46
CARMIL1-205ENST00000635618 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
CARMIL1-205ENST00000635618 MRC2Q9UBG0 1479 aa12.15□□□□□ -0.46
CARMIL1-205ENST00000635618 CUL7Q14999 1698 aa12.14□□□□□ -0.47
CARMIL1-205ENST00000635618 KANK4Q5T7N3 995 aaPredicted RBP12.14□□□□□ -0.47
CARMIL1-205ENST00000635618 WDR97A6NE52 1622 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms