RNA–Protein interactions for RNA: ENST00000635113.1

SPATA20-228, Transcript of spermatogenesis associated 20, humanhuman

TSL 1 (best)

Gene SPATA20, Length 1,706 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA20-228ENST00000635113 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
SPATA20-228ENST00000635113 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
SPATA20-228ENST00000635113 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
SPATA20-228ENST00000635113 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
SPATA20-228ENST00000635113 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
SPATA20-228ENST00000635113 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
SPATA20-228ENST00000635113 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
SPATA20-228ENST00000635113 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
SPATA20-228ENST00000635113 NACADO15069 1562 aa26.75■■□□□ 1.87
SPATA20-228ENST00000635113 ABCC9O60706 1549 aa26.57■■□□□ 1.84
SPATA20-228ENST00000635113 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
SPATA20-228ENST00000635113 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
SPATA20-228ENST00000635113 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
SPATA20-228ENST00000635113 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
SPATA20-228ENST00000635113 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
SPATA20-228ENST00000635113 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
SPATA20-228ENST00000635113 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
SPATA20-228ENST00000635113 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
SPATA20-228ENST00000635113 WIZO95785 1651 aa25.66■■□□□ 1.7
SPATA20-228ENST00000635113 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
SPATA20-228ENST00000635113 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
SPATA20-228ENST00000635113 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
SPATA20-228ENST00000635113 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
SPATA20-228ENST00000635113 LOC105371045A0A1W2PR82 267 aa25.34■■□□□ 1.65
SPATA20-228ENST00000635113 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
SPATA20-228ENST00000635113 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
SPATA20-228ENST00000635113 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
SPATA20-228ENST00000635113 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.63
SPATA20-228ENST00000635113 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
SPATA20-228ENST00000635113 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
SPATA20-228ENST00000635113 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
SPATA20-228ENST00000635113 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
SPATA20-228ENST00000635113 HRCP23327 699 aa24.92■■□□□ 1.58
SPATA20-228ENST00000635113 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
SPATA20-228ENST00000635113 BAZ1BQ9UIG0 1483 aaKnown RBP24.88■■□□□ 1.57
SPATA20-228ENST00000635113 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
SPATA20-228ENST00000635113 EEA1Q15075 1411 aa24.83■■□□□ 1.56
SPATA20-228ENST00000635113 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
SPATA20-228ENST00000635113 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
SPATA20-228ENST00000635113 NCAPD3P42695 1498 aa24.68■■□□□ 1.54
SPATA20-228ENST00000635113 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.52
SPATA20-228ENST00000635113 SOGA1O94964 1423 aa24.57■■□□□ 1.52
SPATA20-228ENST00000635113 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
SPATA20-228ENST00000635113 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
SPATA20-228ENST00000635113 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
SPATA20-228ENST00000635113 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
SPATA20-228ENST00000635113 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
SPATA20-228ENST00000635113 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
SPATA20-228ENST00000635113 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
SPATA20-228ENST00000635113 CEP162Q5TB80 1403 aa24.39■■□□□ 1.49
SPATA20-228ENST00000635113 KIF21BO75037 1637 aa24.37■■□□□ 1.49
SPATA20-228ENST00000635113 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
SPATA20-228ENST00000635113 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
SPATA20-228ENST00000635113 CFTRP13569 1480 aa24.32■■□□□ 1.48
SPATA20-228ENST00000635113 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
SPATA20-228ENST00000635113 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
SPATA20-228ENST00000635113 CUX1P39880 1505 aa24.12■■□□□ 1.45
SPATA20-228ENST00000635113 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
SPATA20-228ENST00000635113 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
SPATA20-228ENST00000635113 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
SPATA20-228ENST00000635113 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
SPATA20-228ENST00000635113 CLIP1P30622 1438 aa24.06■■□□□ 1.44
SPATA20-228ENST00000635113 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
SPATA20-228ENST00000635113 PRXQ9BXM0 1461 aa24.04■■□□□ 1.44
SPATA20-228ENST00000635113 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
SPATA20-228ENST00000635113 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
SPATA20-228ENST00000635113 APLP2Q06481 763 aa23.84■■□□□ 1.41
SPATA20-228ENST00000635113 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
SPATA20-228ENST00000635113 CUX2O14529 1486 aa23.76■■□□□ 1.39
SPATA20-228ENST00000635113 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
SPATA20-228ENST00000635113 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
SPATA20-228ENST00000635113 IGF1RP08069 1367 aa23.74■■□□□ 1.39
SPATA20-228ENST00000635113 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
SPATA20-228ENST00000635113 LAMC3Q9Y6N6 1575 aa23.71■■□□□ 1.39
SPATA20-228ENST00000635113 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
SPATA20-228ENST00000635113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.67■■□□□ 1.38
SPATA20-228ENST00000635113 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
SPATA20-228ENST00000635113 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
SPATA20-228ENST00000635113 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
SPATA20-228ENST00000635113 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
SPATA20-228ENST00000635113 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
SPATA20-228ENST00000635113 ARHGAP35Q9NRY4 1499 aa23.56■■□□□ 1.36
SPATA20-228ENST00000635113 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
SPATA20-228ENST00000635113 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
SPATA20-228ENST00000635113 NESP48681 1621 aa23.53■■□□□ 1.36
SPATA20-228ENST00000635113 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
SPATA20-228ENST00000635113 CUL7Q14999 1698 aa23.48■■□□□ 1.35
SPATA20-228ENST00000635113 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
SPATA20-228ENST00000635113 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
SPATA20-228ENST00000635113 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
SPATA20-228ENST00000635113 WDR97A6NE52 1622 aa23.39■■□□□ 1.34
SPATA20-228ENST00000635113 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.34
SPATA20-228ENST00000635113 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
SPATA20-228ENST00000635113 EFCAB5A4FU69 1503 aa23.36■■□□□ 1.33
SPATA20-228ENST00000635113 KANK4Q5T7N3 995 aaPredicted RBP23.36■■□□□ 1.33
SPATA20-228ENST00000635113 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
SPATA20-228ENST00000635113 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
SPATA20-228ENST00000635113 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
SPATA20-228ENST00000635113 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
SPATA20-228ENST00000635113 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.317e-8■■■□□ 18.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms