RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 NISCHQ9Y2I1 1504 aa46.14■■■■■ 4.98
SKIDA1-204ENST00000633225 CCDC180Q9P1Z9 1646 aa40.82■■■■■ 4.12
SKIDA1-204ENST00000633225 ABCC9O60706 1549 aa39.48■■■■□ 3.91
SKIDA1-204ENST00000633225 ZCCHC6Q5VYS8 1495 aaKnown RBP38.58■■■■□ 3.77
SKIDA1-204ENST00000633225 DCAF8L2P0C7V8 631 aa38.24■■■■□ 3.71
SKIDA1-204ENST00000633225 NACADO15069 1562 aa38.23■■■■□ 3.71
SKIDA1-204ENST00000633225 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
SKIDA1-204ENST00000633225 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
SKIDA1-204ENST00000633225 RB1CC1Q8TDY2 1594 aa38.15■■■■□ 3.7
SKIDA1-204ENST00000633225 UNC13AQ9UPW8 1703 aa37.4■■■■□ 3.58
SKIDA1-204ENST00000633225 SCRIBQ14160 1630 aa37.32■■■■□ 3.56
SKIDA1-204ENST00000633225 BICRAQ9NZM4 1560 aa37.08■■■■□ 3.53
SKIDA1-204ENST00000633225 PABPN1Q86U42 306 aaKnown RBP eCLIP36.94■■■■□ 3.5
SKIDA1-204ENST00000633225 SHROOM4Q9ULL8 1493 aa36.74■■■■□ 3.47
SKIDA1-204ENST00000633225 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
SKIDA1-204ENST00000633225 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
SKIDA1-204ENST00000633225 DNAJC5BQ9UF47 199 aa35.83■■■■□ 3.33
SKIDA1-204ENST00000633225 CC2D2AQ9P2K1 1620 aa35.76■■■■□ 3.31
SKIDA1-204ENST00000633225 SMARCA4P51532 1647 aa35.73■■■■□ 3.31
SKIDA1-204ENST00000633225 BAZ1AQ9NRL2 1556 aaPredicted RBP35.71■■■■□ 3.31
SKIDA1-204ENST00000633225 MROH2BQ7Z745 1585 aa35.61■■■■□ 3.29
SKIDA1-204ENST00000633225 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
SKIDA1-204ENST00000633225 PEG3Q9GZU2 1588 aa35.37■■■■□ 3.25
SKIDA1-204ENST00000633225 RSF1Q96T23 1441 aaPredicted RBP35.35■■■■□ 3.25
SKIDA1-204ENST00000633225 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
SKIDA1-204ENST00000633225 NCAPD3P42695 1498 aa35.28■■■■□ 3.24
SKIDA1-204ENST00000633225 WIZO95785 1651 aa35.25■■■■□ 3.23
SKIDA1-204ENST00000633225 HMGXB3Q12766 1538 aa35.17■■■■□ 3.22
SKIDA1-204ENST00000633225 BAZ1BQ9UIG0 1483 aaKnown RBP35.1■■■■□ 3.21
SKIDA1-204ENST00000633225 TOP2AP11388 1531 aaKnown RBP34.88■■■■□ 3.17
SKIDA1-204ENST00000633225 SUPT5HO00267 1087 aaKnown RBP34.73■■■■□ 3.15
SKIDA1-204ENST00000633225 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
SKIDA1-204ENST00000633225 NESP48681 1621 aa34.35■■■■□ 3.09
SKIDA1-204ENST00000633225 LAMC3Q9Y6N6 1575 aa34.27■■■■□ 3.08
SKIDA1-204ENST00000633225 CADPSQ9ULU8 1353 aa34.26■■■■□ 3.07
SKIDA1-204ENST00000633225 CFTRP13569 1480 aa34.19■■■■□ 3.06
SKIDA1-204ENST00000633225 PRDM2Q13029 1718 aa34■■■■□ 3.03
SKIDA1-204ENST00000633225 PDS5BQ9NTI5 1447 aa33.97■■■■□ 3.03
SKIDA1-204ENST00000633225 KIF21AQ7Z4S6 1674 aa33.96■■■■□ 3.03
SKIDA1-204ENST00000633225 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
SKIDA1-204ENST00000633225 FANCD2Q9BXW9 1451 aa33.89■■■■□ 3.02
SKIDA1-204ENST00000633225 CEP164Q9UPV0 1460 aa33.79■■■■□ 3
SKIDA1-204ENST00000633225 THOC2Q8NI27 1593 aaKnown RBP33.74■■■□□ 2.99
SKIDA1-204ENST00000633225 MRC2Q9UBG0 1479 aa33.65■■■□□ 2.98
SKIDA1-204ENST00000633225 URB2Q14146 1524 aaKnown RBP33.57■■■□□ 2.96
SKIDA1-204ENST00000633225 WDR62O43379 1518 aa33.56■■■□□ 2.96
SKIDA1-204ENST00000633225 TOPBP1Q92547 1522 aa33.42■■■□□ 2.94
SKIDA1-204ENST00000633225 CUX2O14529 1486 aa33.42■■■□□ 2.94
SKIDA1-204ENST00000633225 DNMBPQ6XZF7 1577 aa33.42■■■□□ 2.94
SKIDA1-204ENST00000633225 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
SKIDA1-204ENST00000633225 CUX1P39880 1505 aa33.38■■■□□ 2.93
SKIDA1-204ENST00000633225 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
SKIDA1-204ENST00000633225 SYNJ1O43426 1573 aa33.25■■■□□ 2.91
SKIDA1-204ENST00000633225 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.91
SKIDA1-204ENST00000633225 TOP2BQ02880 1626 aa33.19■■■□□ 2.9
SKIDA1-204ENST00000633225 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
SKIDA1-204ENST00000633225 FGD5Q6ZNL6 1462 aa33.16■■■□□ 2.9
SKIDA1-204ENST00000633225 TARBP1Q13395 1621 aaKnown RBP33.05■■■□□ 2.88
SKIDA1-204ENST00000633225 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
SKIDA1-204ENST00000633225 RAD54L2Q9Y4B4 1467 aa33.03■■■□□ 2.88
SKIDA1-204ENST00000633225 SOGA1O94964 1423 aa32.99■■■□□ 2.87
SKIDA1-204ENST00000633225 ZNF608Q9ULD9 1512 aaPredicted RBP32.93■■■□□ 2.86
SKIDA1-204ENST00000633225 WDR97A6NE52 1622 aa32.93■■■□□ 2.86
SKIDA1-204ENST00000633225 ABCA10Q8WWZ4 1543 aa32.85■■■□□ 2.85
SKIDA1-204ENST00000633225 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
SKIDA1-204ENST00000633225 AQRO60306 1485 aaKnown RBP eCLIP32.77■■■□□ 2.84
SKIDA1-204ENST00000633225 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
SKIDA1-204ENST00000633225 TRIM41Q8WV44 630 aa32.74■■■□□ 2.83
SKIDA1-204ENST00000633225 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
SKIDA1-204ENST00000633225 ABCA5Q8WWZ7 1642 aa32.72■■■□□ 2.83
SKIDA1-204ENST00000633225 GAPVD1Q14C86 1478 aa32.64■■■□□ 2.82
SKIDA1-204ENST00000633225 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
SKIDA1-204ENST00000633225 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
SKIDA1-204ENST00000633225 KIF27Q86VH2 1401 aa32.51■■■□□ 2.8
SKIDA1-204ENST00000633225 SNAPC4Q5SXM2 1469 aa32.5■■■□□ 2.79
SKIDA1-204ENST00000633225 RUSC2Q8N2Y8 1516 aa32.47■■■□□ 2.79
SKIDA1-204ENST00000633225 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
SKIDA1-204ENST00000633225 MAGI1Q96QZ7 1491 aaPredicted RBP32.43■■■□□ 2.78
SKIDA1-204ENST00000633225 ADAMTS12P58397 1594 aa32.38■■■□□ 2.77
SKIDA1-204ENST00000633225 IGF1RP08069 1367 aa32.36■■■□□ 2.77
SKIDA1-204ENST00000633225 CHD1O14646 1710 aa32.32■■■□□ 2.76
SKIDA1-204ENST00000633225 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
SKIDA1-204ENST00000633225 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.75
SKIDA1-204ENST00000633225 CUL7Q14999 1698 aa32.25■■■□□ 2.75
SKIDA1-204ENST00000633225 FBLN2P98095 1184 aa32.19■■■□□ 2.74
SKIDA1-204ENST00000633225 EEA1Q15075 1411 aa32.19■■■□□ 2.74
SKIDA1-204ENST00000633225 CHMP7Q8WUX9 453 aaPredicted RBP32.17■■■□□ 2.74
SKIDA1-204ENST00000633225 GRIN2AQ12879 1464 aa32.17■■■□□ 2.74
SKIDA1-204ENST00000633225 CARMIL1Q5VZK9 1371 aa32.15■■■□□ 2.74
SKIDA1-204ENST00000633225 FAM9AQ8IZU1 332 aaPredicted RBP32.1■■■□□ 2.73
SKIDA1-204ENST00000633225 PRXQ9BXM0 1461 aa32.08■■■□□ 2.73
SKIDA1-204ENST00000633225 CSRNP3Q8WYN3 585 aa32.06■■■□□ 2.72
SKIDA1-204ENST00000633225 OSCARQ8IYS5 282 aa32.05■■■□□ 2.72
SKIDA1-204ENST00000633225 CEP170Q5SW79 1584 aa32.03■■■□□ 2.72
SKIDA1-204ENST00000633225 RAPGEF2Q9Y4G8 1499 aa32.03■■■□□ 2.72
SKIDA1-204ENST00000633225 NUP160Q12769 1436 aa32.02■■■□□ 2.72
SKIDA1-204ENST00000633225 CLASP1Q7Z460 1538 aa31.98■■■□□ 2.71
SKIDA1-204ENST00000633225 KIF21BO75037 1637 aa31.9■■■□□ 2.7
SKIDA1-204ENST00000633225 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
SKIDA1-204ENST00000633225 KIAA0586Q9BVV6 1533 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms