RNA–Protein interactions for RNA: ENST00000629343.2

TCF4-267, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-267ENST00000629343 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
TCF4-267ENST00000629343 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
TCF4-267ENST00000629343 ABCC9O60706 1549 aa20.35■□□□□ 0.85
TCF4-267ENST00000629343 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
TCF4-267ENST00000629343 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
TCF4-267ENST00000629343 NACADO15069 1562 aa19.63■□□□□ 0.73
TCF4-267ENST00000629343 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
TCF4-267ENST00000629343 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
TCF4-267ENST00000629343 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
TCF4-267ENST00000629343 AEBP2Q6ZN18 517 aaPredicted RBP19.33■□□□□ 0.68
TCF4-267ENST00000629343 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
TCF4-267ENST00000629343 BICRAQ9NZM4 1560 aa19.03■□□□□ 0.64
TCF4-267ENST00000629343 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
TCF4-267ENST00000629343 UNC13AQ9UPW8 1703 aa19.02■□□□□ 0.63
TCF4-267ENST00000629343 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
TCF4-267ENST00000629343 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
TCF4-267ENST00000629343 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
TCF4-267ENST00000629343 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
TCF4-267ENST00000629343 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
TCF4-267ENST00000629343 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
TCF4-267ENST00000629343 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
TCF4-267ENST00000629343 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
TCF4-267ENST00000629343 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
TCF4-267ENST00000629343 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
TCF4-267ENST00000629343 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
TCF4-267ENST00000629343 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
TCF4-267ENST00000629343 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
TCF4-267ENST00000629343 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
TCF4-267ENST00000629343 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
TCF4-267ENST00000629343 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
TCF4-267ENST00000629343 WIZO95785 1651 aa17.99■□□□□ 0.47
TCF4-267ENST00000629343 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
TCF4-267ENST00000629343 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
TCF4-267ENST00000629343 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
TCF4-267ENST00000629343 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.43
TCF4-267ENST00000629343 NESP48681 1621 aa17.68■□□□□ 0.42
TCF4-267ENST00000629343 CFTRP13569 1480 aa17.6■□□□□ 0.41
TCF4-267ENST00000629343 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
TCF4-267ENST00000629343 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
TCF4-267ENST00000629343 ERCC6Q03468 1493 aa17.47■□□□□ 0.39
TCF4-267ENST00000629343 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
TCF4-267ENST00000629343 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
TCF4-267ENST00000629343 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
TCF4-267ENST00000629343 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
TCF4-267ENST00000629343 CUX2O14529 1486 aa17.24■□□□□ 0.35
TCF4-267ENST00000629343 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
TCF4-267ENST00000629343 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
TCF4-267ENST00000629343 WDR62O43379 1518 aa17.21■□□□□ 0.34
TCF4-267ENST00000629343 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
TCF4-267ENST00000629343 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
TCF4-267ENST00000629343 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
TCF4-267ENST00000629343 CUX1P39880 1505 aa17.09■□□□□ 0.33
TCF4-267ENST00000629343 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
TCF4-267ENST00000629343 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
TCF4-267ENST00000629343 SOGA1O94964 1423 aa17.04■□□□□ 0.32
TCF4-267ENST00000629343 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
TCF4-267ENST00000629343 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
TCF4-267ENST00000629343 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
TCF4-267ENST00000629343 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
TCF4-267ENST00000629343 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.3
TCF4-267ENST00000629343 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
TCF4-267ENST00000629343 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
TCF4-267ENST00000629343 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
TCF4-267ENST00000629343 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
TCF4-267ENST00000629343 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
TCF4-267ENST00000629343 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
TCF4-267ENST00000629343 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
TCF4-267ENST00000629343 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
TCF4-267ENST00000629343 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
TCF4-267ENST00000629343 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
TCF4-267ENST00000629343 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
TCF4-267ENST00000629343 IGF1RP08069 1367 aa16.74■□□□□ 0.27
TCF4-267ENST00000629343 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
TCF4-267ENST00000629343 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
TCF4-267ENST00000629343 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
TCF4-267ENST00000629343 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
TCF4-267ENST00000629343 FBLN2P98095 1184 aa16.7■□□□□ 0.26
TCF4-267ENST00000629343 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
TCF4-267ENST00000629343 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
TCF4-267ENST00000629343 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
TCF4-267ENST00000629343 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
TCF4-267ENST00000629343 MAGI1Q96QZ7 1491 aaPredicted RBP16.65■□□□□ 0.26
TCF4-267ENST00000629343 ERICH3Q5RHP9 1530 aa16.62■□□□□ 0.25
TCF4-267ENST00000629343 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
TCF4-267ENST00000629343 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
TCF4-267ENST00000629343 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
TCF4-267ENST00000629343 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
TCF4-267ENST00000629343 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
TCF4-267ENST00000629343 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
TCF4-267ENST00000629343 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
TCF4-267ENST00000629343 ADAMTS12P58397 1594 aa16.49■□□□□ 0.23
TCF4-267ENST00000629343 NUP160Q12769 1436 aa16.48■□□□□ 0.23
TCF4-267ENST00000629343 EEA1Q15075 1411 aa16.47■□□□□ 0.23
TCF4-267ENST00000629343 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
TCF4-267ENST00000629343 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
TCF4-267ENST00000629343 CHD1O14646 1710 aa16.45■□□□□ 0.22
TCF4-267ENST00000629343 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
TCF4-267ENST00000629343 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
TCF4-267ENST00000629343 CUL7Q14999 1698 aa16.4■□□□□ 0.22
TCF4-267ENST00000629343 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms