RNA–Protein interactions for RNA: ENST00000628776.2

PCBP3-221, Transcript of poly(rC) binding protein 3, humanhuman

TSL 5

Gene PCBP3, Length 827 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-221ENST00000628776 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
PCBP3-221ENST00000628776 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
PCBP3-221ENST00000628776 ABCC9O60706 1549 aa22.01■■□□□ 1.11
PCBP3-221ENST00000628776 ZCCHC6Q5VYS8 1495 aaKnown RBP21.68■■□□□ 1.06
PCBP3-221ENST00000628776 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
PCBP3-221ENST00000628776 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
PCBP3-221ENST00000628776 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
PCBP3-221ENST00000628776 NACADO15069 1562 aa21.48■■□□□ 1.03
PCBP3-221ENST00000628776 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
PCBP3-221ENST00000628776 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
PCBP3-221ENST00000628776 SCRIBQ14160 1630 aa20.87■□□□□ 0.93
PCBP3-221ENST00000628776 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
PCBP3-221ENST00000628776 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
PCBP3-221ENST00000628776 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
PCBP3-221ENST00000628776 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
PCBP3-221ENST00000628776 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
PCBP3-221ENST00000628776 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
PCBP3-221ENST00000628776 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
PCBP3-221ENST00000628776 SMARCA4P51532 1647 aa20.02■□□□□ 0.79
PCBP3-221ENST00000628776 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
PCBP3-221ENST00000628776 DNAJC5Q9H3Z4 198 aa19.93■□□□□ 0.78
PCBP3-221ENST00000628776 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
PCBP3-221ENST00000628776 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
PCBP3-221ENST00000628776 CC2D2AQ9P2K1 1620 aa19.9■□□□□ 0.78
PCBP3-221ENST00000628776 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
PCBP3-221ENST00000628776 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
PCBP3-221ENST00000628776 NCAPD3P42695 1498 aa19.81■□□□□ 0.76
PCBP3-221ENST00000628776 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
PCBP3-221ENST00000628776 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
PCBP3-221ENST00000628776 WIZO95785 1651 aa19.73■□□□□ 0.75
PCBP3-221ENST00000628776 HMGXB3Q12766 1538 aa19.72■□□□□ 0.75
PCBP3-221ENST00000628776 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
PCBP3-221ENST00000628776 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
PCBP3-221ENST00000628776 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
PCBP3-221ENST00000628776 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
PCBP3-221ENST00000628776 CUX2O14529 1486 aa19.22■□□□□ 0.67
PCBP3-221ENST00000628776 CFTRP13569 1480 aa19.22■□□□□ 0.67
PCBP3-221ENST00000628776 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
PCBP3-221ENST00000628776 NESP48681 1621 aa19.11■□□□□ 0.65
PCBP3-221ENST00000628776 ERCC6Q03468 1493 aa19.04■□□□□ 0.64
PCBP3-221ENST00000628776 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
PCBP3-221ENST00000628776 PRDM2Q13029 1718 aa19■□□□□ 0.63
PCBP3-221ENST00000628776 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
PCBP3-221ENST00000628776 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
PCBP3-221ENST00000628776 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
PCBP3-221ENST00000628776 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
PCBP3-221ENST00000628776 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.6
PCBP3-221ENST00000628776 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
PCBP3-221ENST00000628776 WDR62O43379 1518 aa18.74■□□□□ 0.59
PCBP3-221ENST00000628776 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
PCBP3-221ENST00000628776 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
PCBP3-221ENST00000628776 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
PCBP3-221ENST00000628776 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
PCBP3-221ENST00000628776 CUX1P39880 1505 aa18.69■□□□□ 0.58
PCBP3-221ENST00000628776 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
PCBP3-221ENST00000628776 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
PCBP3-221ENST00000628776 SYNJ1O43426 1573 aa18.64■□□□□ 0.57
PCBP3-221ENST00000628776 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
PCBP3-221ENST00000628776 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
PCBP3-221ENST00000628776 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
PCBP3-221ENST00000628776 SOGA1O94964 1423 aa18.6■□□□□ 0.57
PCBP3-221ENST00000628776 IFT140Q96RY7 1462 aa18.58■□□□□ 0.57
PCBP3-221ENST00000628776 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
PCBP3-221ENST00000628776 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
PCBP3-221ENST00000628776 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
PCBP3-221ENST00000628776 KIF27Q86VH2 1401 aa18.46■□□□□ 0.55
PCBP3-221ENST00000628776 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
PCBP3-221ENST00000628776 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
PCBP3-221ENST00000628776 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
PCBP3-221ENST00000628776 EEA1Q15075 1411 aa18.4■□□□□ 0.54
PCBP3-221ENST00000628776 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
PCBP3-221ENST00000628776 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
PCBP3-221ENST00000628776 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCBP3-221ENST00000628776 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
PCBP3-221ENST00000628776 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
PCBP3-221ENST00000628776 HRCP23327 699 aa18.3■□□□□ 0.52
PCBP3-221ENST00000628776 ABCA5Q8WWZ7 1642 aa18.3■□□□□ 0.52
PCBP3-221ENST00000628776 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
PCBP3-221ENST00000628776 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
PCBP3-221ENST00000628776 FAM9AQ8IZU1 332 aaPredicted RBP18.27■□□□□ 0.52
PCBP3-221ENST00000628776 IGF1RP08069 1367 aa18.27■□□□□ 0.51
PCBP3-221ENST00000628776 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
PCBP3-221ENST00000628776 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
PCBP3-221ENST00000628776 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
PCBP3-221ENST00000628776 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
PCBP3-221ENST00000628776 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
PCBP3-221ENST00000628776 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
PCBP3-221ENST00000628776 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
PCBP3-221ENST00000628776 CUL7Q14999 1698 aa18.18■□□□□ 0.5
PCBP3-221ENST00000628776 FBLN2P98095 1184 aa18.17■□□□□ 0.5
PCBP3-221ENST00000628776 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
PCBP3-221ENST00000628776 RAPGEF2Q9Y4G8 1499 aa18.13■□□□□ 0.49
PCBP3-221ENST00000628776 ADAMTS12P58397 1594 aa18.12■□□□□ 0.49
PCBP3-221ENST00000628776 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
PCBP3-221ENST00000628776 OSCARQ8IYS5 282 aa18.06■□□□□ 0.48
PCBP3-221ENST00000628776 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
PCBP3-221ENST00000628776 KIF21BO75037 1637 aa18.05■□□□□ 0.48
PCBP3-221ENST00000628776 GOLGA3Q08378 1498 aa18.04■□□□□ 0.48
PCBP3-221ENST00000628776 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
PCBP3-221ENST00000628776 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms