RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
FOXCUT-201ENST00000628509 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
FOXCUT-201ENST00000628509 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
FOXCUT-201ENST00000628509 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.86
FOXCUT-201ENST00000628509 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
FOXCUT-201ENST00000628509 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
FOXCUT-201ENST00000628509 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
FOXCUT-201ENST00000628509 ABCC9O60706 1549 aa19.3■□□□□ 0.68
FOXCUT-201ENST00000628509 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
FOXCUT-201ENST00000628509 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
FOXCUT-201ENST00000628509 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
FOXCUT-201ENST00000628509 NACADO15069 1562 aa19.09■□□□□ 0.65
FOXCUT-201ENST00000628509 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
FOXCUT-201ENST00000628509 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
FOXCUT-201ENST00000628509 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
FOXCUT-201ENST00000628509 FOXD1Q16676 465 aa18.49■□□□□ 0.55
FOXCUT-201ENST00000628509 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
FOXCUT-201ENST00000628509 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
FOXCUT-201ENST00000628509 PABPN1Q86U42 306 aaKnown RBP eCLIP18.1■□□□□ 0.49
FOXCUT-201ENST00000628509 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
FOXCUT-201ENST00000628509 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
FOXCUT-201ENST00000628509 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
FOXCUT-201ENST00000628509 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
FOXCUT-201ENST00000628509 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
FOXCUT-201ENST00000628509 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
FOXCUT-201ENST00000628509 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
FOXCUT-201ENST00000628509 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
FOXCUT-201ENST00000628509 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
FOXCUT-201ENST00000628509 WIZO95785 1651 aa17.64■□□□□ 0.42
FOXCUT-201ENST00000628509 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
FOXCUT-201ENST00000628509 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.41
FOXCUT-201ENST00000628509 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
FOXCUT-201ENST00000628509 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
FOXCUT-201ENST00000628509 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
FOXCUT-201ENST00000628509 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
FOXCUT-201ENST00000628509 MSH5O43196 834 aa17.46■□□□□ 0.39
FOXCUT-201ENST00000628509 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
FOXCUT-201ENST00000628509 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
FOXCUT-201ENST00000628509 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
FOXCUT-201ENST00000628509 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
FOXCUT-201ENST00000628509 CADPSQ9ULU8 1353 aa17.08■□□□□ 0.32
FOXCUT-201ENST00000628509 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
FOXCUT-201ENST00000628509 CFTRP13569 1480 aa17.07■□□□□ 0.32
FOXCUT-201ENST00000628509 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
FOXCUT-201ENST00000628509 ADRA2BP18089 450 aa17.05■□□□□ 0.32
FOXCUT-201ENST00000628509 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
FOXCUT-201ENST00000628509 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
FOXCUT-201ENST00000628509 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
FOXCUT-201ENST00000628509 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
FOXCUT-201ENST00000628509 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
FOXCUT-201ENST00000628509 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
FOXCUT-201ENST00000628509 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
FOXCUT-201ENST00000628509 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
FOXCUT-201ENST00000628509 NESP48681 1621 aa16.81■□□□□ 0.28
FOXCUT-201ENST00000628509 TOP2BQ02880 1626 aa16.77■□□□□ 0.27
FOXCUT-201ENST00000628509 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
FOXCUT-201ENST00000628509 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
FOXCUT-201ENST00000628509 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
FOXCUT-201ENST00000628509 EEA1Q15075 1411 aa16.7■□□□□ 0.26
FOXCUT-201ENST00000628509 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
FOXCUT-201ENST00000628509 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
FOXCUT-201ENST00000628509 CUX1P39880 1505 aa16.68■□□□□ 0.26
FOXCUT-201ENST00000628509 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
FOXCUT-201ENST00000628509 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
FOXCUT-201ENST00000628509 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
FOXCUT-201ENST00000628509 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
FOXCUT-201ENST00000628509 WDR62O43379 1518 aa16.55■□□□□ 0.24
FOXCUT-201ENST00000628509 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
FOXCUT-201ENST00000628509 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.23
FOXCUT-201ENST00000628509 SOGA1O94964 1423 aa16.52■□□□□ 0.23
FOXCUT-201ENST00000628509 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
FOXCUT-201ENST00000628509 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
FOXCUT-201ENST00000628509 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
FOXCUT-201ENST00000628509 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
FOXCUT-201ENST00000628509 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
FOXCUT-201ENST00000628509 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
FOXCUT-201ENST00000628509 CUX2O14529 1486 aa16.46■□□□□ 0.23
FOXCUT-201ENST00000628509 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
FOXCUT-201ENST00000628509 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
FOXCUT-201ENST00000628509 KIF21BO75037 1637 aa16.37■□□□□ 0.21
FOXCUT-201ENST00000628509 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
FOXCUT-201ENST00000628509 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
FOXCUT-201ENST00000628509 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
FOXCUT-201ENST00000628509 CUL7Q14999 1698 aa16.34■□□□□ 0.21
FOXCUT-201ENST00000628509 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
FOXCUT-201ENST00000628509 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
FOXCUT-201ENST00000628509 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
FOXCUT-201ENST00000628509 IGF1RP08069 1367 aa16.28■□□□□ 0.2
FOXCUT-201ENST00000628509 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
FOXCUT-201ENST00000628509 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
FOXCUT-201ENST00000628509 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
FOXCUT-201ENST00000628509 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
FOXCUT-201ENST00000628509 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
FOXCUT-201ENST00000628509 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
FOXCUT-201ENST00000628509 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
FOXCUT-201ENST00000628509 EIF4G3O43432 1585 aaKnown RBP16.22■□□□□ 0.19
FOXCUT-201ENST00000628509 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
FOXCUT-201ENST00000628509 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
FOXCUT-201ENST00000628509 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
FOXCUT-201ENST00000628509 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms