RNA–Protein interactions for RNA: ENST00000627678.2

LINC01206-223, Transcript of long intergenic non-protein coding RNA 1206, human

TSL 5

Gene LINC01206, Length 636 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01206-223	ENST00000627678	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.53	■□□□□ 0.24
LINC01206-223	ENST00000627678	NISCH	Q9Y2I1	1504 aa		16.04	■□□□□ 0.16
LINC01206-223	ENST00000627678	CHIC1	Q5VXU3	224 aa		15.95	■□□□□ 0.14
LINC01206-223	ENST00000627678	ABCC9	O60706	1549 aa		15.25	■□□□□ 0.03
LINC01206-223	ENST00000627678	DNAJC5B	Q9UF47	199 aa		15.05	■□□□□ -0
LINC01206-223	ENST00000627678	CCDC180	Q9P1Z9	1646 aa		14.51	□□□□□ -0.09
LINC01206-223	ENST00000627678	SENP3	Q9H4L4	574 aa	Predicted RBP	14.33	□□□□□ -0.12
LINC01206-223	ENST00000627678	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.23	□□□□□ -0.13
LINC01206-223	ENST00000627678	DNAJC5	Q9H3Z4	198 aa		14.14	□□□□□ -0.15
LINC01206-223	ENST00000627678	RB1CC1	Q8TDY2	1594 aa		14.13	□□□□□ -0.15
LINC01206-223	ENST00000627678	PHF23	Q9BUL5	403 aa	Predicted RBP	14.09	□□□□□ -0.15
LINC01206-223	ENST00000627678	DCAF8L2	P0C7V8	631 aa		13.93	□□□□□ -0.18
LINC01206-223	ENST00000627678	NACAD	O15069	1562 aa		13.92	□□□□□ -0.18
LINC01206-223	ENST00000627678	UNC13A	Q9UPW8	1703 aa		13.87	□□□□□ -0.19
LINC01206-223	ENST00000627678	BICRA	Q9NZM4	1560 aa		13.87	□□□□□ -0.19
LINC01206-223	ENST00000627678	CECR2	Q9BXF3	1484 aa		13.78	□□□□□ -0.2
LINC01206-223	ENST00000627678	CC2D2A	Q9P2K1	1620 aa		13.7	□□□□□ -0.22
LINC01206-223	ENST00000627678	MYO15B	Q96JP2	1530 aa		13.52	□□□□□ -0.25
LINC01206-223	ENST00000627678	EIF4G1	Q04637	1599 aa	Known RBP	13.51	□□□□□ -0.25
LINC01206-223	ENST00000627678	SHROOM4	Q9ULL8	1493 aa		13.42	□□□□□ -0.26
LINC01206-223	ENST00000627678	CUX2	O14529	1486 aa		13.29	□□□□□ -0.28
LINC01206-223	ENST00000627678	SCRIB	Q14160	1630 aa		13.28	□□□□□ -0.28
LINC01206-223	ENST00000627678	TRIM41	Q8WV44	630 aa		13.25	□□□□□ -0.29
LINC01206-223	ENST00000627678	FOXD1	Q16676	465 aa		13.19	□□□□□ -0.3
LINC01206-223	ENST00000627678	DCAF1	Q9Y4B6	1507 aa		13.15	□□□□□ -0.3
LINC01206-223	ENST00000627678	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.13	□□□□□ -0.31
LINC01206-223	ENST00000627678	ERCC6	Q03468	1493 aa		13.12	□□□□□ -0.31
LINC01206-223	ENST00000627678	NES	P48681	1621 aa		12.98	□□□□□ -0.33
LINC01206-223	ENST00000627678	NCAPD3	P42695	1498 aa		12.95	□□□□□ -0.34
LINC01206-223	ENST00000627678	PLPPR3	Q6T4P5	718 aa		12.94	□□□□□ -0.34
LINC01206-223	ENST00000627678	THOC2	Q8NI27	1593 aa	Known RBP	12.83	□□□□□ -0.36
LINC01206-223	ENST00000627678	ATAD2B	Q9ULI0	1458 aa		12.82	□□□□□ -0.36
LINC01206-223	ENST00000627678	OSCAR	Q8IYS5	282 aa		12.72	□□□□□ -0.37
LINC01206-223	ENST00000627678	SMARCA2	P51531	1590 aa		12.72	□□□□□ -0.37
LINC01206-223	ENST00000627678	SLC24A1	O60721	1099 aa		12.69	□□□□□ -0.38
LINC01206-223	ENST00000627678	HMGXB3	Q12766	1538 aa		12.68	□□□□□ -0.38
LINC01206-223	ENST00000627678	KIF21A	Q7Z4S6	1674 aa		12.68	□□□□□ -0.38
LINC01206-223	ENST00000627678	LAMC3	Q9Y6N6	1575 aa		12.64	□□□□□ -0.39
LINC01206-223	ENST00000627678	PDS5B	Q9NTI5	1447 aa		12.63	□□□□□ -0.39
LINC01206-223	ENST00000627678	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.59	□□□□□ -0.39
LINC01206-223	ENST00000627678	SMARCA4	P51532	1647 aa		12.59	□□□□□ -0.39
LINC01206-223	ENST00000627678	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.59	□□□□□ -0.39
LINC01206-223	ENST00000627678	MRC2	Q9UBG0	1479 aa		12.55	□□□□□ -0.4
LINC01206-223	ENST00000627678	CADPS	Q9ULU8	1353 aa		12.54	□□□□□ -0.4
LINC01206-223	ENST00000627678	RIMBP3C	A6NJZ7	1639 aa		12.53	□□□□□ -0.4
LINC01206-223	ENST00000627678	RIMBP3B	A6NNM3	1639 aa		12.53	□□□□□ -0.4
LINC01206-223	ENST00000627678	RIMBP3	Q9UFD9	1639 aa		12.53	□□□□□ -0.4
LINC01206-223	ENST00000627678	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.53	□□□□□ -0.4
LINC01206-223	ENST00000627678	WDR62	O43379	1518 aa		12.52	□□□□□ -0.4
LINC01206-223	ENST00000627678	MSH5	O43196	834 aa		12.5	□□□□□ -0.41
LINC01206-223	ENST00000627678	TRH	P20396	242 aa	Predicted RBP	12.5	□□□□□ -0.41
LINC01206-223	ENST00000627678	CYB5RL	Q6IPT4	315 aa		12.5	□□□□□ -0.41
LINC01206-223	ENST00000627678	PEG3	Q9GZU2	1588 aa		12.47	□□□□□ -0.41
LINC01206-223	ENST00000627678	ADRA2B	P18089	450 aa		12.43	□□□□□ -0.42
LINC01206-223	ENST00000627678	ARHGEF11	O15085	1522 aa		12.42	□□□□□ -0.42
LINC01206-223	ENST00000627678	MROH2B	Q7Z745	1585 aa		12.4	□□□□□ -0.42
LINC01206-223	ENST00000627678	CEP164	Q9UPV0	1460 aa		12.36	□□□□□ -0.43
LINC01206-223	ENST00000627678	FANCD2	Q9BXW9	1451 aa		12.35	□□□□□ -0.43
LINC01206-223	ENST00000627678	PPP6R1	Q9UPN7	881 aa		12.35	□□□□□ -0.43
LINC01206-223	ENST00000627678	URB2	Q14146	1524 aa	Known RBP	12.32	□□□□□ -0.44
LINC01206-223	ENST00000627678	ARAP1	Q96P48	1450 aa		12.3	□□□□□ -0.44
LINC01206-223	ENST00000627678	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.29	□□□□□ -0.44
LINC01206-223	ENST00000627678	CFTR	P13569	1480 aa		12.24	□□□□□ -0.45
LINC01206-223	ENST00000627678	WIZ	O95785	1651 aa		12.2	□□□□□ -0.46
LINC01206-223	ENST00000627678	ILDR1	Q86SU0	546 aa	Predicted RBP	12.19	□□□□□ -0.46
LINC01206-223	ENST00000627678	EHMT2	Q96KQ7	1210 aa		12.19	□□□□□ -0.46
LINC01206-223	ENST00000627678	IFT140	Q96RY7	1462 aa		12.16	□□□□□ -0.46
LINC01206-223	ENST00000627678	FBLN2	P98095	1184 aa		12.16	□□□□□ -0.46
LINC01206-223	ENST00000627678	AQR	O60306	1485 aa	Known RBP eCLIP	12.14	□□□□□ -0.47
LINC01206-223	ENST00000627678	RSF1	Q96T23	1441 aa	Predicted RBP	12.12	□□□□□ -0.47
LINC01206-223	ENST00000627678	CHD1	O14646	1710 aa		12.11	□□□□□ -0.47
LINC01206-223	ENST00000627678	EIF4G3	O43432	1585 aa	Known RBP	12.06	□□□□□ -0.48
LINC01206-223	ENST00000627678	TOPBP1	Q92547	1522 aa		12.06	□□□□□ -0.48
LINC01206-223	ENST00000627678	TARBP1	Q13395	1621 aa	Known RBP	11.99	□□□□□ -0.49
LINC01206-223	ENST00000627678	CLASP1	Q7Z460	1538 aa		11.98	□□□□□ -0.49
LINC01206-223	ENST00000627678	TDRD9	Q8NDG6	1382 aa	Known RBP	11.98	□□□□□ -0.49
LINC01206-223	ENST00000627678	KDM4F	A0A1W2PPD8	638 aa		11.97	□□□□□ -0.49
LINC01206-223	ENST00000627678	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.96	□□□□□ -0.49
LINC01206-223	ENST00000627678	RAD54L2	Q9Y4B4	1467 aa		11.94	□□□□□ -0.5
LINC01206-223	ENST00000627678	GAPVD1	Q14C86	1478 aa		11.93	□□□□□ -0.5
LINC01206-223	ENST00000627678	ABCC8	Q09428	1581 aa		11.92	□□□□□ -0.5
LINC01206-223	ENST00000627678	TOP2A	P11388	1531 aa	Known RBP	11.92	□□□□□ -0.5
LINC01206-223	ENST00000627678	PRDM2	Q13029	1718 aa		11.91	□□□□□ -0.5
LINC01206-223	ENST00000627678	CCDC88B	A6NC98	1476 aa		11.91	□□□□□ -0.5
LINC01206-223	ENST00000627678	POLA1	P09884	1462 aa	Predicted RBP	11.9	□□□□□ -0.5
LINC01206-223	ENST00000627678	DNMBP	Q6XZF7	1577 aa		11.9	□□□□□ -0.5
LINC01206-223	ENST00000627678	SNAPC4	Q5SXM2	1469 aa		11.89	□□□□□ -0.51
LINC01206-223	ENST00000627678	SOGA1	O94964	1423 aa		11.87	□□□□□ -0.51
LINC01206-223	ENST00000627678	SYNJ1	O43426	1573 aa		11.85	□□□□□ -0.51
LINC01206-223	ENST00000627678	ERCC6L2	Q5T890	1561 aa		11.84	□□□□□ -0.51
LINC01206-223	ENST00000627678	POTED	Q86YR6	584 aa		11.83	□□□□□ -0.52
LINC01206-223	ENST00000627678	KIF13A	Q9H1H9	1805 aa		11.8	□□□□□ -0.52
LINC01206-223	ENST00000627678	SYNJ2	O15056	1496 aa		11.8	□□□□□ -0.52
LINC01206-223	ENST00000627678	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.79	□□□□□ -0.52
LINC01206-223	ENST00000627678	GRIN2B	Q13224	1484 aa		11.77	□□□□□ -0.52
LINC01206-223	ENST00000627678	FAM69C	Q0P6D2	419 aa		11.77	□□□□□ -0.53
LINC01206-223	ENST00000627678	FGD5	Q6ZNL6	1462 aa		11.73	□□□□□ -0.53
LINC01206-223	ENST00000627678	WDR97	A6NE52	1622 aa		11.68	□□□□□ -0.54
LINC01206-223	ENST00000627678	CEP170	Q5SW79	1584 aa		11.68	□□□□□ -0.54
LINC01206-223	ENST00000627678	ABCC10	Q5T3U5	1492 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms