RNA–Protein interactions for RNA: ENST00000626400.1

AP003500.1-201, humanhuman

TSL 4 BASIC

Gene AP003500.1, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003500.1-201ENST00000626400 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
AP003500.1-201ENST00000626400 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
AP003500.1-201ENST00000626400 ABCC9O60706 1549 aa19.54■□□□□ 0.72
AP003500.1-201ENST00000626400 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
AP003500.1-201ENST00000626400 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
AP003500.1-201ENST00000626400 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
AP003500.1-201ENST00000626400 NACADO15069 1562 aa19.18■□□□□ 0.66
AP003500.1-201ENST00000626400 RB1CC1Q8TDY2 1594 aa19.11■□□□□ 0.65
AP003500.1-201ENST00000626400 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
AP003500.1-201ENST00000626400 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
AP003500.1-201ENST00000626400 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
AP003500.1-201ENST00000626400 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
AP003500.1-201ENST00000626400 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
AP003500.1-201ENST00000626400 BICRAQ9NZM4 1560 aa18.43■□□□□ 0.54
AP003500.1-201ENST00000626400 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
AP003500.1-201ENST00000626400 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
AP003500.1-201ENST00000626400 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
AP003500.1-201ENST00000626400 SMARCA4P51532 1647 aa17.81■□□□□ 0.44
AP003500.1-201ENST00000626400 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
AP003500.1-201ENST00000626400 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
AP003500.1-201ENST00000626400 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
AP003500.1-201ENST00000626400 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
AP003500.1-201ENST00000626400 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
AP003500.1-201ENST00000626400 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
AP003500.1-201ENST00000626400 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
AP003500.1-201ENST00000626400 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
AP003500.1-201ENST00000626400 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
AP003500.1-201ENST00000626400 RSF1Q96T23 1441 aaPredicted RBP17.54■□□□□ 0.4
AP003500.1-201ENST00000626400 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
AP003500.1-201ENST00000626400 WIZO95785 1651 aa17.47■□□□□ 0.39
AP003500.1-201ENST00000626400 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
AP003500.1-201ENST00000626400 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
AP003500.1-201ENST00000626400 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
AP003500.1-201ENST00000626400 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
AP003500.1-201ENST00000626400 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.32
AP003500.1-201ENST00000626400 CADPSQ9ULU8 1353 aa17.08■□□□□ 0.32
AP003500.1-201ENST00000626400 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
AP003500.1-201ENST00000626400 CFTRP13569 1480 aa17.06■□□□□ 0.32
AP003500.1-201ENST00000626400 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
AP003500.1-201ENST00000626400 NESP48681 1621 aa16.96■□□□□ 0.3
AP003500.1-201ENST00000626400 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
AP003500.1-201ENST00000626400 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
AP003500.1-201ENST00000626400 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
AP003500.1-201ENST00000626400 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
AP003500.1-201ENST00000626400 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
AP003500.1-201ENST00000626400 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
AP003500.1-201ENST00000626400 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
AP003500.1-201ENST00000626400 CUX2O14529 1486 aa16.78■□□□□ 0.28
AP003500.1-201ENST00000626400 WDR62O43379 1518 aa16.76■□□□□ 0.27
AP003500.1-201ENST00000626400 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
AP003500.1-201ENST00000626400 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
AP003500.1-201ENST00000626400 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
AP003500.1-201ENST00000626400 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
AP003500.1-201ENST00000626400 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
AP003500.1-201ENST00000626400 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
AP003500.1-201ENST00000626400 CUX1P39880 1505 aa16.55■□□□□ 0.24
AP003500.1-201ENST00000626400 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
AP003500.1-201ENST00000626400 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
AP003500.1-201ENST00000626400 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
AP003500.1-201ENST00000626400 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
AP003500.1-201ENST00000626400 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
AP003500.1-201ENST00000626400 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
AP003500.1-201ENST00000626400 SOGA1O94964 1423 aa16.41■□□□□ 0.22
AP003500.1-201ENST00000626400 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
AP003500.1-201ENST00000626400 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
AP003500.1-201ENST00000626400 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
AP003500.1-201ENST00000626400 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
AP003500.1-201ENST00000626400 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
AP003500.1-201ENST00000626400 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
AP003500.1-201ENST00000626400 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
AP003500.1-201ENST00000626400 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
AP003500.1-201ENST00000626400 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
AP003500.1-201ENST00000626400 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
AP003500.1-201ENST00000626400 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
AP003500.1-201ENST00000626400 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
AP003500.1-201ENST00000626400 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
AP003500.1-201ENST00000626400 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
AP003500.1-201ENST00000626400 CUL7Q14999 1698 aa16.18■□□□□ 0.18
AP003500.1-201ENST00000626400 EEA1Q15075 1411 aa16.17■□□□□ 0.18
AP003500.1-201ENST00000626400 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
AP003500.1-201ENST00000626400 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
AP003500.1-201ENST00000626400 SNAPC4Q5SXM2 1469 aa16.13■□□□□ 0.17
AP003500.1-201ENST00000626400 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
AP003500.1-201ENST00000626400 CHD1O14646 1710 aa16.1■□□□□ 0.17
AP003500.1-201ENST00000626400 IGF1RP08069 1367 aa16.06■□□□□ 0.16
AP003500.1-201ENST00000626400 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
AP003500.1-201ENST00000626400 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
AP003500.1-201ENST00000626400 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
AP003500.1-201ENST00000626400 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
AP003500.1-201ENST00000626400 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
AP003500.1-201ENST00000626400 NUP160Q12769 1436 aa15.98■□□□□ 0.15
AP003500.1-201ENST00000626400 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
AP003500.1-201ENST00000626400 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
AP003500.1-201ENST00000626400 RUSC2Q8N2Y8 1516 aa15.95■□□□□ 0.14
AP003500.1-201ENST00000626400 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
AP003500.1-201ENST00000626400 KIF21BO75037 1637 aa15.94■□□□□ 0.14
AP003500.1-201ENST00000626400 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
AP003500.1-201ENST00000626400 FBLN2P98095 1184 aa15.92■□□□□ 0.14
AP003500.1-201ENST00000626400 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
AP003500.1-201ENST00000626400 KIAA0586Q9BVV6 1533 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms