RNA–Protein interactions for RNA: ENST00000626064.1

POLR1D-208, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 2

Gene POLR1D, Length 988 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-208ENST00000626064 NISCHQ9Y2I1 1504 aa54.29■■■■■ 6.28
POLR1D-208ENST00000626064 CCDC180Q9P1Z9 1646 aa48.01■■■■■ 5.28
POLR1D-208ENST00000626064 ABCC9O60706 1549 aa46.33■■■■■ 5.01
POLR1D-208ENST00000626064 ZCCHC6Q5VYS8 1495 aaKnown RBP45.32■■■■■ 4.85
POLR1D-208ENST00000626064 NACADO15069 1562 aa45.03■■■■■ 4.8
POLR1D-208ENST00000626064 DCAF1Q9Y4B6 1507 aa45.01■■■■■ 4.8
POLR1D-208ENST00000626064 DCAF8L2P0C7V8 631 aa45.01■■■■■ 4.8
POLR1D-208ENST00000626064 MYO15BQ96JP2 1530 aa45.01■■■■■ 4.8
POLR1D-208ENST00000626064 RB1CC1Q8TDY2 1594 aa44.88■■■■■ 4.78
POLR1D-208ENST00000626064 UNC13AQ9UPW8 1703 aa43.92■■■■■ 4.62
POLR1D-208ENST00000626064 SCRIBQ14160 1630 aa43.73■■■■■ 4.59
POLR1D-208ENST00000626064 BICRAQ9NZM4 1560 aa43.54■■■■■ 4.56
POLR1D-208ENST00000626064 PABPN1Q86U42 306 aaKnown RBP eCLIP43.4■■■■■ 4.54
POLR1D-208ENST00000626064 SHROOM4Q9ULL8 1493 aa43.15■■■■■ 4.5
POLR1D-208ENST00000626064 EIF4G1Q04637 1599 aaKnown RBP42.31■■■■■ 4.36
POLR1D-208ENST00000626064 CECR2Q9BXF3 1484 aa42.19■■■■■ 4.34
POLR1D-208ENST00000626064 DNAJC5BQ9UF47 199 aa42.09■■■■■ 4.33
POLR1D-208ENST00000626064 BAZ1AQ9NRL2 1556 aaPredicted RBP42.01■■■■■ 4.32
POLR1D-208ENST00000626064 CC2D2AQ9P2K1 1620 aa41.98■■■■■ 4.31
POLR1D-208ENST00000626064 SMARCA4P51532 1647 aa41.98■■■■■ 4.31
POLR1D-208ENST00000626064 MROH2BQ7Z745 1585 aa41.81■■■■■ 4.28
POLR1D-208ENST00000626064 PEG3Q9GZU2 1588 aa41.63■■■■■ 4.25
POLR1D-208ENST00000626064 ATAD2BQ9ULI0 1458 aa41.62■■■■■ 4.25
POLR1D-208ENST00000626064 SMARCA2P51531 1590 aa41.59■■■■■ 4.25
POLR1D-208ENST00000626064 RSF1Q96T23 1441 aaPredicted RBP41.58■■■■■ 4.25
POLR1D-208ENST00000626064 NCAPD3P42695 1498 aa41.56■■■■■ 4.24
POLR1D-208ENST00000626064 WIZO95785 1651 aa41.39■■■■■ 4.22
POLR1D-208ENST00000626064 HMGXB3Q12766 1538 aa41.36■■■■■ 4.21
POLR1D-208ENST00000626064 BAZ1BQ9UIG0 1483 aaKnown RBP41.25■■■■■ 4.19
POLR1D-208ENST00000626064 TOP2AP11388 1531 aaKnown RBP40.98■■■■■ 4.15
POLR1D-208ENST00000626064 SUPT5HO00267 1087 aaKnown RBP40.86■■■■■ 4.13
POLR1D-208ENST00000626064 CCDC88BA6NC98 1476 aa40.52■■■■■ 4.08
POLR1D-208ENST00000626064 CADPSQ9ULU8 1353 aa40.35■■■■■ 4.05
POLR1D-208ENST00000626064 LAMC3Q9Y6N6 1575 aa40.32■■■■■ 4.05
POLR1D-208ENST00000626064 NESP48681 1621 aa40.28■■■■■ 4.04
POLR1D-208ENST00000626064 CFTRP13569 1480 aa40.24■■■■■ 4.03
POLR1D-208ENST00000626064 PDS5BQ9NTI5 1447 aa40.02■■■■■ 4
POLR1D-208ENST00000626064 PRDM2Q13029 1718 aa39.99■■■■□ 3.99
POLR1D-208ENST00000626064 ERCC6Q03468 1493 aa39.85■■■■□ 3.97
POLR1D-208ENST00000626064 KIF21AQ7Z4S6 1674 aa39.84■■■■□ 3.97
POLR1D-208ENST00000626064 FANCD2Q9BXW9 1451 aa39.83■■■■□ 3.97
POLR1D-208ENST00000626064 CEP164Q9UPV0 1460 aa39.71■■■■□ 3.95
POLR1D-208ENST00000626064 THOC2Q8NI27 1593 aaKnown RBP39.56■■■■□ 3.92
POLR1D-208ENST00000626064 MRC2Q9UBG0 1479 aa39.55■■■■□ 3.92
POLR1D-208ENST00000626064 WDR62O43379 1518 aa39.42■■■■□ 3.9
POLR1D-208ENST00000626064 URB2Q14146 1524 aaKnown RBP39.4■■■■□ 3.9
POLR1D-208ENST00000626064 ABCC8Q09428 1581 aa39.37■■■■□ 3.89
POLR1D-208ENST00000626064 CUX2O14529 1486 aa39.32■■■■□ 3.89
POLR1D-208ENST00000626064 TOPBP1Q92547 1522 aa39.28■■■■□ 3.88
POLR1D-208ENST00000626064 DNMBPQ6XZF7 1577 aa39.28■■■■□ 3.88
POLR1D-208ENST00000626064 CUX1P39880 1505 aa39.19■■■■□ 3.86
POLR1D-208ENST00000626064 WRNQ14191 1432 aaPredicted RBP eCLIP39.14■■■■□ 3.86
POLR1D-208ENST00000626064 TOP2BQ02880 1626 aa39.03■■■■□ 3.84
POLR1D-208ENST00000626064 BIVM-ERCC5R4GMW8 1640 aa39.03■■■■□ 3.84
POLR1D-208ENST00000626064 SYNJ1O43426 1573 aa39■■■■□ 3.83
POLR1D-208ENST00000626064 POLA1P09884 1462 aaPredicted RBP38.98■■■■□ 3.83
POLR1D-208ENST00000626064 FGD5Q6ZNL6 1462 aa38.94■■■■□ 3.82
POLR1D-208ENST00000626064 IFT140Q96RY7 1462 aa38.89■■■■□ 3.82
POLR1D-208ENST00000626064 SOGA1O94964 1423 aa38.84■■■■□ 3.81
POLR1D-208ENST00000626064 TARBP1Q13395 1621 aaKnown RBP38.83■■■■□ 3.81
POLR1D-208ENST00000626064 RAD54L2Q9Y4B4 1467 aa38.78■■■■□ 3.8
POLR1D-208ENST00000626064 ABCA10Q8WWZ4 1543 aa38.65■■■■□ 3.78
POLR1D-208ENST00000626064 ZNF608Q9ULD9 1512 aaPredicted RBP38.63■■■■□ 3.78
POLR1D-208ENST00000626064 WDR97A6NE52 1622 aa38.63■■■■□ 3.78
POLR1D-208ENST00000626064 TRIM41Q8WV44 630 aa38.62■■■■□ 3.77
POLR1D-208ENST00000626064 CHIC1Q5VXU3 224 aa38.58■■■■□ 3.77
POLR1D-208ENST00000626064 TDRD9Q8NDG6 1382 aaKnown RBP38.52■■■■□ 3.76
POLR1D-208ENST00000626064 AQRO60306 1485 aaKnown RBP eCLIP38.5■■■■□ 3.759e-6■■□□□ 13.1
POLR1D-208ENST00000626064 EIF4G3O43432 1585 aaKnown RBP38.48■■■■□ 3.75
POLR1D-208ENST00000626064 ABCA5Q8WWZ7 1642 aa38.41■■■■□ 3.74
POLR1D-208ENST00000626064 GAPVD1Q14C86 1478 aa38.4■■■■□ 3.74
POLR1D-208ENST00000626064 GRIN2BQ13224 1484 aa38.31■■■■□ 3.72
POLR1D-208ENST00000626064 KIF27Q86VH2 1401 aa38.29■■■■□ 3.72
POLR1D-208ENST00000626064 PBRM1Q86U86 1689 aa38.26■■■■□ 3.71
POLR1D-208ENST00000626064 ERICH3Q5RHP9 1530 aa38.2■■■■□ 3.71
POLR1D-208ENST00000626064 MAGI1Q96QZ7 1491 aaPredicted RBP38.15■■■■□ 3.7
POLR1D-208ENST00000626064 IGF1RP08069 1367 aa38.13■■■■□ 3.69
POLR1D-208ENST00000626064 SNAPC4Q5SXM2 1469 aa38.13■■■■□ 3.69
POLR1D-208ENST00000626064 RUSC2Q8N2Y8 1516 aa38.12■■■■□ 3.69
POLR1D-208ENST00000626064 SYNJ2O15056 1496 aa37.99■■■■□ 3.67
POLR1D-208ENST00000626064 FHAD1B1AJZ9 1412 aa37.98■■■■□ 3.67
POLR1D-208ENST00000626064 EEA1Q15075 1411 aa37.98■■■■□ 3.67
POLR1D-208ENST00000626064 ADAMTS12P58397 1594 aa37.97■■■■□ 3.67
POLR1D-208ENST00000626064 CUL7Q14999 1698 aa37.94■■■■□ 3.66
POLR1D-208ENST00000626064 CHD1O14646 1710 aa37.92■■■■□ 3.66
POLR1D-208ENST00000626064 CHMP7Q8WUX9 453 aaPredicted RBP37.92■■■■□ 3.66
POLR1D-208ENST00000626064 CARMIL1Q5VZK9 1371 aa37.88■■■■□ 3.65
POLR1D-208ENST00000626064 FBLN2P98095 1184 aa37.86■■■■□ 3.65
POLR1D-208ENST00000626064 CSRNP3Q8WYN3 585 aa37.86■■■■□ 3.65
POLR1D-208ENST00000626064 OSCARQ8IYS5 282 aa37.83■■■■□ 3.65
POLR1D-208ENST00000626064 GRIN2AQ12879 1464 aa37.8■■■■□ 3.64
POLR1D-208ENST00000626064 PRXQ9BXM0 1461 aa37.75■■■■□ 3.63
POLR1D-208ENST00000626064 FAM9AQ8IZU1 332 aaPredicted RBP37.72■■■■□ 3.63
POLR1D-208ENST00000626064 RAPGEF2Q9Y4G8 1499 aa37.7■■■■□ 3.63
POLR1D-208ENST00000626064 NUP160Q12769 1436 aa37.66■■■■□ 3.62
POLR1D-208ENST00000626064 CEP170Q5SW79 1584 aa37.58■■■■□ 3.61
POLR1D-208ENST00000626064 CLASP1Q7Z460 1538 aa37.55■■■■□ 3.6
POLR1D-208ENST00000626064 KIF21BO75037 1637 aa37.52■■■■□ 3.6
POLR1D-208ENST00000626064 DNAJC5Q9H3Z4 198 aa37.49■■■■□ 3.59
POLR1D-208ENST00000626064 KIAA0586Q9BVV6 1533 aa37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms