RNA–Protein interactions for RNA: ENST00000624534.1

SMIM11B-206, Transcript of small integral membrane protein 11B, humanhuman

TSL 4

Gene SMIM11B, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-206ENST00000624534 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
SMIM11B-206ENST00000624534 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
SMIM11B-206ENST00000624534 ABCC9O60706 1549 aa31.84■■■□□ 2.69
SMIM11B-206ENST00000624534 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
SMIM11B-206ENST00000624534 NACADO15069 1562 aa30.9■■■□□ 2.54
SMIM11B-206ENST00000624534 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
SMIM11B-206ENST00000624534 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
SMIM11B-206ENST00000624534 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
SMIM11B-206ENST00000624534 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
SMIM11B-206ENST00000624534 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
SMIM11B-206ENST00000624534 SCRIBQ14160 1630 aa30■■■□□ 2.39
SMIM11B-206ENST00000624534 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
SMIM11B-206ENST00000624534 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
SMIM11B-206ENST00000624534 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
SMIM11B-206ENST00000624534 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
SMIM11B-206ENST00000624534 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
SMIM11B-206ENST00000624534 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
SMIM11B-206ENST00000624534 CECR2Q9BXF3 1484 aa28.81■■■□□ 2.2
SMIM11B-206ENST00000624534 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
SMIM11B-206ENST00000624534 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
SMIM11B-206ENST00000624534 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
SMIM11B-206ENST00000624534 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
SMIM11B-206ENST00000624534 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
SMIM11B-206ENST00000624534 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
SMIM11B-206ENST00000624534 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
SMIM11B-206ENST00000624534 HMGXB3Q12766 1538 aa28.39■■■□□ 2.14
SMIM11B-206ENST00000624534 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
SMIM11B-206ENST00000624534 BAZ1BQ9UIG0 1483 aaKnown RBP28.31■■■□□ 2.12
SMIM11B-206ENST00000624534 WIZO95785 1651 aa28.3■■■□□ 2.12
SMIM11B-206ENST00000624534 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
SMIM11B-206ENST00000624534 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
SMIM11B-206ENST00000624534 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
SMIM11B-206ENST00000624534 CCDC88BA6NC98 1476 aa27.66■■■□□ 2.02
SMIM11B-206ENST00000624534 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
SMIM11B-206ENST00000624534 NESP48681 1621 aa27.62■■■□□ 2.01
SMIM11B-206ENST00000624534 CFTRP13569 1480 aa27.54■■■□□ 2
SMIM11B-206ENST00000624534 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
SMIM11B-206ENST00000624534 PRDM2Q13029 1718 aa27.49■■□□□ 1.99
SMIM11B-206ENST00000624534 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
SMIM11B-206ENST00000624534 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
SMIM11B-206ENST00000624534 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
SMIM11B-206ENST00000624534 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
SMIM11B-206ENST00000624534 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
SMIM11B-206ENST00000624534 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
SMIM11B-206ENST00000624534 CUX2O14529 1486 aa27.13■■□□□ 1.93
SMIM11B-206ENST00000624534 WDR62O43379 1518 aa27.09■■□□□ 1.93
SMIM11B-206ENST00000624534 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
SMIM11B-206ENST00000624534 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
SMIM11B-206ENST00000624534 DNMBPQ6XZF7 1577 aa26.95■■□□□ 1.9
SMIM11B-206ENST00000624534 TOPBP1Q92547 1522 aa26.91■■□□□ 1.9
SMIM11B-206ENST00000624534 CUX1P39880 1505 aa26.8■■□□□ 1.88
SMIM11B-206ENST00000624534 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
SMIM11B-206ENST00000624534 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
SMIM11B-206ENST00000624534 BIVM-ERCC5R4GMW8 1640 aa26.71■■□□□ 1.87
SMIM11B-206ENST00000624534 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
SMIM11B-206ENST00000624534 POLA1P09884 1462 aaPredicted RBP26.69■■□□□ 1.86
SMIM11B-206ENST00000624534 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
SMIM11B-206ENST00000624534 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
SMIM11B-206ENST00000624534 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
SMIM11B-206ENST00000624534 SOGA1O94964 1423 aa26.59■■□□□ 1.85
SMIM11B-206ENST00000624534 RAD54L2Q9Y4B4 1467 aa26.54■■□□□ 1.84
SMIM11B-206ENST00000624534 WDR97A6NE52 1622 aa26.52■■□□□ 1.84
SMIM11B-206ENST00000624534 ZNF608Q9ULD9 1512 aaPredicted RBP26.48■■□□□ 1.83
SMIM11B-206ENST00000624534 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
SMIM11B-206ENST00000624534 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
SMIM11B-206ENST00000624534 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
SMIM11B-206ENST00000624534 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
SMIM11B-206ENST00000624534 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
SMIM11B-206ENST00000624534 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
SMIM11B-206ENST00000624534 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
SMIM11B-206ENST00000624534 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
SMIM11B-206ENST00000624534 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
SMIM11B-206ENST00000624534 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.78
SMIM11B-206ENST00000624534 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
SMIM11B-206ENST00000624534 ERICH3Q5RHP9 1530 aa26.18■■□□□ 1.78
SMIM11B-206ENST00000624534 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
SMIM11B-206ENST00000624534 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
SMIM11B-206ENST00000624534 CHD1O14646 1710 aa26.11■■□□□ 1.77
SMIM11B-206ENST00000624534 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
SMIM11B-206ENST00000624534 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
SMIM11B-206ENST00000624534 CUL7Q14999 1698 aa26.03■■□□□ 1.76
SMIM11B-206ENST00000624534 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
SMIM11B-206ENST00000624534 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
SMIM11B-206ENST00000624534 FBLN2P98095 1184 aa26■■□□□ 1.75
SMIM11B-206ENST00000624534 OSCARQ8IYS5 282 aa26■■□□□ 1.75
SMIM11B-206ENST00000624534 IGF1RP08069 1367 aa25.99■■□□□ 1.75
SMIM11B-206ENST00000624534 RUSC2Q8N2Y8 1516 aa25.93■■□□□ 1.74
SMIM11B-206ENST00000624534 GRIN2AQ12879 1464 aa25.93■■□□□ 1.74
SMIM11B-206ENST00000624534 EEA1Q15075 1411 aa25.92■■□□□ 1.74
SMIM11B-206ENST00000624534 DNAJC5Q9H3Z4 198 aa25.89■■□□□ 1.74
SMIM11B-206ENST00000624534 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
SMIM11B-206ENST00000624534 NUP160Q12769 1436 aa25.8■■□□□ 1.72
SMIM11B-206ENST00000624534 CLASP1Q7Z460 1538 aa25.79■■□□□ 1.72
SMIM11B-206ENST00000624534 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
SMIM11B-206ENST00000624534 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
SMIM11B-206ENST00000624534 CSRNP3Q8WYN3 585 aa25.76■■□□□ 1.71
SMIM11B-206ENST00000624534 PRXQ9BXM0 1461 aa25.73■■□□□ 1.71
SMIM11B-206ENST00000624534 FAM9AQ8IZU1 332 aaPredicted RBP25.65■■□□□ 1.7
SMIM11B-206ENST00000624534 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
SMIM11B-206ENST00000624534 KIF21BO75037 1637 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms