RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
ATRX-213ENST00000624032 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.24
ATRX-213ENST00000624032 ABCC9O60706 1549 aa21.94■■□□□ 1.1
ATRX-213ENST00000624032 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
ATRX-213ENST00000624032 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
ATRX-213ENST00000624032 DCAF1Q9Y4B6 1507 aa21.52■■□□□ 1.04
ATRX-213ENST00000624032 NACADO15069 1562 aa21.33■■□□□ 1.01
ATRX-213ENST00000624032 MYO15BQ96JP2 1530 aa21.33■■□□□ 1.01
ATRX-213ENST00000624032 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
ATRX-213ENST00000624032 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
ATRX-213ENST00000624032 SCRIBQ14160 1630 aa21.08■□□□□ 0.97
ATRX-213ENST00000624032 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
ATRX-213ENST00000624032 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
ATRX-213ENST00000624032 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.89
ATRX-213ENST00000624032 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
ATRX-213ENST00000624032 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
ATRX-213ENST00000624032 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
ATRX-213ENST00000624032 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
ATRX-213ENST00000624032 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
ATRX-213ENST00000624032 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
ATRX-213ENST00000624032 WIZO95785 1651 aa20.06■□□□□ 0.8
ATRX-213ENST00000624032 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
ATRX-213ENST00000624032 ATAD2BQ9ULI0 1458 aa19.87■□□□□ 0.77
ATRX-213ENST00000624032 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
ATRX-213ENST00000624032 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
ATRX-213ENST00000624032 CC2D2AQ9P2K1 1620 aa19.81■□□□□ 0.76
ATRX-213ENST00000624032 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
ATRX-213ENST00000624032 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
ATRX-213ENST00000624032 NCAPD3P42695 1498 aa19.71■□□□□ 0.75
ATRX-213ENST00000624032 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
ATRX-213ENST00000624032 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
ATRX-213ENST00000624032 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
ATRX-213ENST00000624032 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
ATRX-213ENST00000624032 CFTRP13569 1480 aa19.22■□□□□ 0.67
ATRX-213ENST00000624032 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
ATRX-213ENST00000624032 NESP48681 1621 aa19.2■□□□□ 0.66
ATRX-213ENST00000624032 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
ATRX-213ENST00000624032 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
ATRX-213ENST00000624032 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
ATRX-213ENST00000624032 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
ATRX-213ENST00000624032 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
ATRX-213ENST00000624032 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.63
ATRX-213ENST00000624032 SYNJ1O43426 1573 aa18.97■□□□□ 0.63
ATRX-213ENST00000624032 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
ATRX-213ENST00000624032 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
ATRX-213ENST00000624032 CUX1P39880 1505 aa18.91■□□□□ 0.62
ATRX-213ENST00000624032 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
ATRX-213ENST00000624032 HRCP23327 699 aa18.89■□□□□ 0.61
ATRX-213ENST00000624032 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
ATRX-213ENST00000624032 FAM9AQ8IZU1 332 aaPredicted RBP18.85■□□□□ 0.61
ATRX-213ENST00000624032 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
ATRX-213ENST00000624032 URB2Q14146 1524 aaKnown RBP18.81■□□□□ 0.6
ATRX-213ENST00000624032 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
ATRX-213ENST00000624032 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
ATRX-213ENST00000624032 DNMBPQ6XZF7 1577 aa18.77■□□□□ 0.6
ATRX-213ENST00000624032 SOGA1O94964 1423 aa18.76■□□□□ 0.59
ATRX-213ENST00000624032 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
ATRX-213ENST00000624032 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
ATRX-213ENST00000624032 MRC2Q9UBG0 1479 aa18.73■□□□□ 0.59
ATRX-213ENST00000624032 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
ATRX-213ENST00000624032 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
ATRX-213ENST00000624032 EHMT2Q96KQ7 1210 aa18.66■□□□□ 0.58
ATRX-213ENST00000624032 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
ATRX-213ENST00000624032 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
ATRX-213ENST00000624032 WDR62O43379 1518 aa18.62■□□□□ 0.57
ATRX-213ENST00000624032 CUX2O14529 1486 aa18.59■□□□□ 0.57
ATRX-213ENST00000624032 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
ATRX-213ENST00000624032 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
ATRX-213ENST00000624032 EEA1Q15075 1411 aa18.54■□□□□ 0.56
ATRX-213ENST00000624032 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
ATRX-213ENST00000624032 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
ATRX-213ENST00000624032 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
ATRX-213ENST00000624032 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
ATRX-213ENST00000624032 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
ATRX-213ENST00000624032 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
ATRX-213ENST00000624032 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
ATRX-213ENST00000624032 IGF1RP08069 1367 aa18.44■□□□□ 0.54
ATRX-213ENST00000624032 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.54
ATRX-213ENST00000624032 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
ATRX-213ENST00000624032 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
ATRX-213ENST00000624032 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.54
ATRX-213ENST00000624032 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
ATRX-213ENST00000624032 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
ATRX-213ENST00000624032 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
ATRX-213ENST00000624032 KIF21BO75037 1637 aa18.35■□□□□ 0.53
ATRX-213ENST00000624032 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
ATRX-213ENST00000624032 GOLGA3Q08378 1498 aa18.33■□□□□ 0.53
ATRX-213ENST00000624032 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
ATRX-213ENST00000624032 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
ATRX-213ENST00000624032 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
ATRX-213ENST00000624032 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
ATRX-213ENST00000624032 CUL7Q14999 1698 aa18.24■□□□□ 0.51
ATRX-213ENST00000624032 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
ATRX-213ENST00000624032 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
ATRX-213ENST00000624032 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
ATRX-213ENST00000624032 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
ATRX-213ENST00000624032 FHAD1B1AJZ9 1412 aa18.18■□□□□ 0.5
ATRX-213ENST00000624032 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
ATRX-213ENST00000624032 FBLN2P98095 1184 aa18.14■□□□□ 0.49
ATRX-213ENST00000624032 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms