RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
EBF1-211ENST00000622875 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
EBF1-211ENST00000622875 ABCC9O60706 1549 aa13.66□□□□□ -0.22
EBF1-211ENST00000622875 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
EBF1-211ENST00000622875 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
EBF1-211ENST00000622875 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
EBF1-211ENST00000622875 UNC13AQ9UPW8 1703 aa12.63□□□□□ -0.39
EBF1-211ENST00000622875 CUX2O14529 1486 aa12.53□□□□□ -0.4
EBF1-211ENST00000622875 NACADO15069 1562 aa12.53□□□□□ -0.4
EBF1-211ENST00000622875 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
EBF1-211ENST00000622875 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
EBF1-211ENST00000622875 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
EBF1-211ENST00000622875 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.41
EBF1-211ENST00000622875 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
EBF1-211ENST00000622875 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
EBF1-211ENST00000622875 MYO15BQ96JP2 1530 aa12.16□□□□□ -0.46
EBF1-211ENST00000622875 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
EBF1-211ENST00000622875 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
EBF1-211ENST00000622875 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
EBF1-211ENST00000622875 AEBP2Q6ZN18 517 aaPredicted RBP11.78□□□□□ -0.52
EBF1-211ENST00000622875 BAZ1AQ9NRL2 1556 aaPredicted RBP11.67□□□□□ -0.54
EBF1-211ENST00000622875 RIMBP3CA6NJZ7 1639 aa11.66□□□□□ -0.54
EBF1-211ENST00000622875 RIMBP3BA6NNM3 1639 aa11.66□□□□□ -0.54
EBF1-211ENST00000622875 RIMBP3Q9UFD9 1639 aa11.66□□□□□ -0.54
EBF1-211ENST00000622875 ILDR1Q86SU0 546 aaPredicted RBP11.59□□□□□ -0.55
EBF1-211ENST00000622875 DCAF1Q9Y4B6 1507 aa11.56□□□□□ -0.56
EBF1-211ENST00000622875 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
EBF1-211ENST00000622875 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
EBF1-211ENST00000622875 KIF21AQ7Z4S6 1674 aa11.48□□□□□ -0.57
EBF1-211ENST00000622875 LAMC3Q9Y6N6 1575 aa11.48□□□□□ -0.57
EBF1-211ENST00000622875 NESP48681 1621 aa11.46□□□□□ -0.58
EBF1-211ENST00000622875 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
EBF1-211ENST00000622875 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
EBF1-211ENST00000622875 DCAF8L2P0C7V8 631 aa11.44□□□□□ -0.58
EBF1-211ENST00000622875 WDR62O43379 1518 aa11.42□□□□□ -0.58
EBF1-211ENST00000622875 HMGXB3Q12766 1538 aa11.42□□□□□ -0.58
EBF1-211ENST00000622875 SMARCA2P51531 1590 aa11.39□□□□□ -0.59
EBF1-211ENST00000622875 MRC2Q9UBG0 1479 aa11.31□□□□□ -0.6
EBF1-211ENST00000622875 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
EBF1-211ENST00000622875 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
EBF1-211ENST00000622875 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
EBF1-211ENST00000622875 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
EBF1-211ENST00000622875 ATAD2BQ9ULI0 1458 aa11.24□□□□□ -0.61
EBF1-211ENST00000622875 ERCC6L2Q5T890 1561 aa11.18□□□□□ -0.62
EBF1-211ENST00000622875 RSF1Q96T23 1441 aaPredicted RBP11.14□□□□□ -0.63
EBF1-211ENST00000622875 CYB5RLQ6IPT4 315 aa11.1□□□□□ -0.63
EBF1-211ENST00000622875 PEG3Q9GZU2 1588 aa11.1□□□□□ -0.63
EBF1-211ENST00000622875 SMARCA4P51532 1647 aa11.04□□□□□ -0.64
EBF1-211ENST00000622875 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
EBF1-211ENST00000622875 CHD1O14646 1710 aa11.01□□□□□ -0.65
EBF1-211ENST00000622875 SOCS7O14512 581 aa11□□□□□ -0.65
EBF1-211ENST00000622875 LMTK3Q96Q04 1460 aa11□□□□□ -0.65
EBF1-211ENST00000622875 FBXO41Q8TF61 875 aa11□□□□□ -0.65
EBF1-211ENST00000622875 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
EBF1-211ENST00000622875 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
EBF1-211ENST00000622875 KIF13AQ9H1H9 1805 aa10.93□□□□□ -0.66
EBF1-211ENST00000622875 HECW2Q9P2P5 1572 aa10.93□□□□□ -0.66
EBF1-211ENST00000622875 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
EBF1-211ENST00000622875 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
EBF1-211ENST00000622875 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
EBF1-211ENST00000622875 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
EBF1-211ENST00000622875 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
EBF1-211ENST00000622875 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
EBF1-211ENST00000622875 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
EBF1-211ENST00000622875 PRDM2Q13029 1718 aa10.79□□□□□ -0.68
EBF1-211ENST00000622875 ILDR2Q71H61 639 aa10.75□□□□□ -0.69
EBF1-211ENST00000622875 SYNJ1O43426 1573 aa10.73□□□□□ -0.69
EBF1-211ENST00000622875 CFTRP13569 1480 aa10.71□□□□□ -0.69
EBF1-211ENST00000622875 KDM6BO15054 1643 aa10.71□□□□□ -0.69
EBF1-211ENST00000622875 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
EBF1-211ENST00000622875 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
EBF1-211ENST00000622875 ADGRL1O94910 1474 aa10.68□□□□□ -0.7
EBF1-211ENST00000622875 TARBP1Q13395 1621 aaKnown RBP10.68□□□□□ -0.7
EBF1-211ENST00000622875 SYNJ2O15056 1496 aa10.68□□□□□ -0.7
EBF1-211ENST00000622875 SPATA31D1Q6ZQQ2 1576 aa10.66□□□□□ -0.7
EBF1-211ENST00000622875 DIP2BQ9P265 1576 aa10.6□□□□□ -0.71
EBF1-211ENST00000622875 ABCC10Q5T3U5 1492 aa10.6□□□□□ -0.71
EBF1-211ENST00000622875 DISP3Q9P2K9 1392 aa10.59□□□□□ -0.71
EBF1-211ENST00000622875 ABCC8Q09428 1581 aa10.59□□□□□ -0.71
EBF1-211ENST00000622875 MAPKBP1O60336 1514 aa10.58□□□□□ -0.72
EBF1-211ENST00000622875 TOPBP1Q92547 1522 aa10.57□□□□□ -0.72
EBF1-211ENST00000622875 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
EBF1-211ENST00000622875 MAGI1Q96QZ7 1491 aaPredicted RBP10.54□□□□□ -0.72
EBF1-211ENST00000622875 TOP2BQ02880 1626 aa10.54□□□□□ -0.72
EBF1-211ENST00000622875 DNMBPQ6XZF7 1577 aa10.53□□□□□ -0.72
EBF1-211ENST00000622875 AQRO60306 1485 aaKnown RBP eCLIP10.51□□□□□ -0.73
EBF1-211ENST00000622875 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
EBF1-211ENST00000622875 SNAPC4Q5SXM2 1469 aa10.48□□□□□ -0.73
EBF1-211ENST00000622875 PPRC1Q5VV67 1664 aaKnown RBP10.45□□□□□ -0.74
EBF1-211ENST00000622875 CEP170Q5SW79 1584 aa10.42□□□□□ -0.74
EBF1-211ENST00000622875 TSPOAP1O95153 1857 aa10.4□□□□□ -0.74
EBF1-211ENST00000622875 FBLN2P98095 1184 aa10.39□□□□□ -0.75
EBF1-211ENST00000622875 PBRM1Q86U86 1689 aa10.38□□□□□ -0.75
EBF1-211ENST00000622875 POLA1P09884 1462 aaPredicted RBP10.37□□□□□ -0.75
EBF1-211ENST00000622875 WIZO95785 1651 aa10.36□□□□□ -0.75
EBF1-211ENST00000622875 GLI2P10070 1586 aa10.36□□□□□ -0.75
EBF1-211ENST00000622875 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
EBF1-211ENST00000622875 FAM69CQ0P6D2 419 aa10.35□□□□□ -0.75
EBF1-211ENST00000622875 PCF11O94913 1555 aaKnown RBP10.33□□□□□ -0.76
EBF1-211ENST00000622875 ADCY10Q96PN6 1610 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms