RNA–Protein interactions for RNA: ENST00000622854.1

AP001065.3-201, humanhuman

BASIC

Gene AP001065.3, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.3-201ENST00000622854 AEBP2Q6ZN18 517 aaPredicted RBP24.89■■□□□ 1.58
AP001065.3-201ENST00000622854 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
AP001065.3-201ENST00000622854 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
AP001065.3-201ENST00000622854 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
AP001065.3-201ENST00000622854 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
AP001065.3-201ENST00000622854 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
AP001065.3-201ENST00000622854 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
AP001065.3-201ENST00000622854 ABCC9O60706 1549 aa20.57■□□□□ 0.88
AP001065.3-201ENST00000622854 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
AP001065.3-201ENST00000622854 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
AP001065.3-201ENST00000622854 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
AP001065.3-201ENST00000622854 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
AP001065.3-201ENST00000622854 NACADO15069 1562 aa20.19■□□□□ 0.82
AP001065.3-201ENST00000622854 PLPPR3Q6T4P5 718 aa20.1■□□□□ 0.81
AP001065.3-201ENST00000622854 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
AP001065.3-201ENST00000622854 SCRIBQ14160 1630 aa19.99■□□□□ 0.79
AP001065.3-201ENST00000622854 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.76
AP001065.3-201ENST00000622854 FOXD1Q16676 465 aa19.57■□□□□ 0.72
AP001065.3-201ENST00000622854 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
AP001065.3-201ENST00000622854 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.68
AP001065.3-201ENST00000622854 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
AP001065.3-201ENST00000622854 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
AP001065.3-201ENST00000622854 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
AP001065.3-201ENST00000622854 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
AP001065.3-201ENST00000622854 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
AP001065.3-201ENST00000622854 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
AP001065.3-201ENST00000622854 WIZO95785 1651 aa19.07■□□□□ 0.64
AP001065.3-201ENST00000622854 ADRA2BP18089 450 aa18.98■□□□□ 0.63
AP001065.3-201ENST00000622854 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
AP001065.3-201ENST00000622854 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
AP001065.3-201ENST00000622854 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
AP001065.3-201ENST00000622854 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
AP001065.3-201ENST00000622854 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
AP001065.3-201ENST00000622854 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
AP001065.3-201ENST00000622854 BAZ1BQ9UIG0 1483 aaKnown RBP18.68■□□□□ 0.58
AP001065.3-201ENST00000622854 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
AP001065.3-201ENST00000622854 HMGXB3Q12766 1538 aa18.62■□□□□ 0.57
AP001065.3-201ENST00000622854 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
AP001065.3-201ENST00000622854 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
AP001065.3-201ENST00000622854 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
AP001065.3-201ENST00000622854 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
AP001065.3-201ENST00000622854 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
AP001065.3-201ENST00000622854 CFTRP13569 1480 aa18.18■□□□□ 0.5
AP001065.3-201ENST00000622854 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
AP001065.3-201ENST00000622854 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
AP001065.3-201ENST00000622854 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
AP001065.3-201ENST00000622854 SYNJ1O43426 1573 aa18.08■□□□□ 0.48
AP001065.3-201ENST00000622854 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
AP001065.3-201ENST00000622854 NESP48681 1621 aa18.05■□□□□ 0.48
AP001065.3-201ENST00000622854 MSH5O43196 834 aa18.05■□□□□ 0.48
AP001065.3-201ENST00000622854 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
AP001065.3-201ENST00000622854 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
AP001065.3-201ENST00000622854 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
AP001065.3-201ENST00000622854 CUX1P39880 1505 aa17.96■□□□□ 0.47
AP001065.3-201ENST00000622854 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
AP001065.3-201ENST00000622854 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
AP001065.3-201ENST00000622854 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
AP001065.3-201ENST00000622854 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
AP001065.3-201ENST00000622854 SOGA1O94964 1423 aa17.84■□□□□ 0.45
AP001065.3-201ENST00000622854 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
AP001065.3-201ENST00000622854 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
AP001065.3-201ENST00000622854 RUSC2Q8N2Y8 1516 aa17.8■□□□□ 0.44
AP001065.3-201ENST00000622854 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
AP001065.3-201ENST00000622854 TOPBP1Q92547 1522 aa17.77■□□□□ 0.43
AP001065.3-201ENST00000622854 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
AP001065.3-201ENST00000622854 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
AP001065.3-201ENST00000622854 EEA1Q15075 1411 aa17.74■□□□□ 0.43
AP001065.3-201ENST00000622854 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
AP001065.3-201ENST00000622854 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
AP001065.3-201ENST00000622854 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
AP001065.3-201ENST00000622854 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
AP001065.3-201ENST00000622854 WDR97A6NE52 1622 aa17.63■□□□□ 0.41
AP001065.3-201ENST00000622854 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
AP001065.3-201ENST00000622854 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
AP001065.3-201ENST00000622854 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
AP001065.3-201ENST00000622854 CUX2O14529 1486 aa17.61■□□□□ 0.41
AP001065.3-201ENST00000622854 KIF21BO75037 1637 aa17.61■□□□□ 0.41
AP001065.3-201ENST00000622854 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
AP001065.3-201ENST00000622854 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
AP001065.3-201ENST00000622854 WDR62O43379 1518 aa17.59■□□□□ 0.41
AP001065.3-201ENST00000622854 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
AP001065.3-201ENST00000622854 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
AP001065.3-201ENST00000622854 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
AP001065.3-201ENST00000622854 KCNA4P22459 653 aa17.51■□□□□ 0.39
AP001065.3-201ENST00000622854 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
AP001065.3-201ENST00000622854 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
AP001065.3-201ENST00000622854 PRXQ9BXM0 1461 aa17.49■□□□□ 0.39
AP001065.3-201ENST00000622854 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
AP001065.3-201ENST00000622854 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
AP001065.3-201ENST00000622854 IGF1RP08069 1367 aa17.43■□□□□ 0.38
AP001065.3-201ENST00000622854 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
AP001065.3-201ENST00000622854 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
AP001065.3-201ENST00000622854 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
AP001065.3-201ENST00000622854 CUL7Q14999 1698 aa17.41■□□□□ 0.38
AP001065.3-201ENST00000622854 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
AP001065.3-201ENST00000622854 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
AP001065.3-201ENST00000622854 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.37
AP001065.3-201ENST00000622854 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
AP001065.3-201ENST00000622854 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
AP001065.3-201ENST00000622854 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms