RNA–Protein interactions for RNA: ENST00000619922.1

PRAMEF11-201, Transcript of PRAME family member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF11, Length 1,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11-201ENST00000619922 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
PRAMEF11-201ENST00000619922 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
PRAMEF11-201ENST00000619922 ABCC9O60706 1549 aa22.52■■□□□ 1.2
PRAMEF11-201ENST00000619922 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
PRAMEF11-201ENST00000619922 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
PRAMEF11-201ENST00000619922 NACADO15069 1562 aa21.32■■□□□ 1
PRAMEF11-201ENST00000619922 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
PRAMEF11-201ENST00000619922 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
PRAMEF11-201ENST00000619922 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
PRAMEF11-201ENST00000619922 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
PRAMEF11-201ENST00000619922 DCAF1Q9Y4B6 1507 aa21.02■□□□□ 0.95
PRAMEF11-201ENST00000619922 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
PRAMEF11-201ENST00000619922 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.93
PRAMEF11-201ENST00000619922 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
PRAMEF11-201ENST00000619922 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
PRAMEF11-201ENST00000619922 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
PRAMEF11-201ENST00000619922 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
PRAMEF11-201ENST00000619922 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
PRAMEF11-201ENST00000619922 SUPT5HO00267 1087 aaKnown RBP20.21■□□□□ 0.83
PRAMEF11-201ENST00000619922 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
PRAMEF11-201ENST00000619922 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
PRAMEF11-201ENST00000619922 NCAPD3P42695 1498 aa19.64■□□□□ 0.74
PRAMEF11-201ENST00000619922 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
PRAMEF11-201ENST00000619922 DNAJC5Q9H3Z4 198 aa19.6■□□□□ 0.73
PRAMEF11-201ENST00000619922 SMARCA4P51532 1647 aa19.55■□□□□ 0.72
PRAMEF11-201ENST00000619922 CUX2O14529 1486 aa19.55■□□□□ 0.72
PRAMEF11-201ENST00000619922 ATAD2BQ9ULI0 1458 aa19.55■□□□□ 0.72
PRAMEF11-201ENST00000619922 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
PRAMEF11-201ENST00000619922 SMARCA2P51531 1590 aa19.52■□□□□ 0.72
PRAMEF11-201ENST00000619922 WIZO95785 1651 aa19.51■□□□□ 0.71
PRAMEF11-201ENST00000619922 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
PRAMEF11-201ENST00000619922 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
PRAMEF11-201ENST00000619922 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
PRAMEF11-201ENST00000619922 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
PRAMEF11-201ENST00000619922 NESP48681 1621 aa19.33■□□□□ 0.69
PRAMEF11-201ENST00000619922 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
PRAMEF11-201ENST00000619922 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
PRAMEF11-201ENST00000619922 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
PRAMEF11-201ENST00000619922 KIF21AQ7Z4S6 1674 aa19.19■□□□□ 0.66
PRAMEF11-201ENST00000619922 CCDC88BA6NC98 1476 aa19.14■□□□□ 0.65
PRAMEF11-201ENST00000619922 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
PRAMEF11-201ENST00000619922 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
PRAMEF11-201ENST00000619922 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
PRAMEF11-201ENST00000619922 WDR62O43379 1518 aa18.95■□□□□ 0.62
PRAMEF11-201ENST00000619922 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
PRAMEF11-201ENST00000619922 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
PRAMEF11-201ENST00000619922 CFTRP13569 1480 aa18.8■□□□□ 0.6
PRAMEF11-201ENST00000619922 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
PRAMEF11-201ENST00000619922 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
PRAMEF11-201ENST00000619922 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
PRAMEF11-201ENST00000619922 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
PRAMEF11-201ENST00000619922 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
PRAMEF11-201ENST00000619922 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
PRAMEF11-201ENST00000619922 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
PRAMEF11-201ENST00000619922 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
PRAMEF11-201ENST00000619922 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
PRAMEF11-201ENST00000619922 SOGA1O94964 1423 aa18.47■□□□□ 0.55
PRAMEF11-201ENST00000619922 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
PRAMEF11-201ENST00000619922 EEA1Q15075 1411 aa18.45■□□□□ 0.54
PRAMEF11-201ENST00000619922 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
PRAMEF11-201ENST00000619922 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
PRAMEF11-201ENST00000619922 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
PRAMEF11-201ENST00000619922 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
PRAMEF11-201ENST00000619922 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
PRAMEF11-201ENST00000619922 RIMBP3CA6NJZ7 1639 aa18.41■□□□□ 0.54
PRAMEF11-201ENST00000619922 RIMBP3BA6NNM3 1639 aa18.41■□□□□ 0.54
PRAMEF11-201ENST00000619922 RIMBP3Q9UFD9 1639 aa18.41■□□□□ 0.54
PRAMEF11-201ENST00000619922 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
PRAMEF11-201ENST00000619922 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
PRAMEF11-201ENST00000619922 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.53
PRAMEF11-201ENST00000619922 CUX1P39880 1505 aa18.38■□□□□ 0.53
PRAMEF11-201ENST00000619922 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
PRAMEF11-201ENST00000619922 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
PRAMEF11-201ENST00000619922 ARHGEF11O15085 1522 aa18.32■□□□□ 0.52
PRAMEF11-201ENST00000619922 CHD1O14646 1710 aa18.32■□□□□ 0.52
PRAMEF11-201ENST00000619922 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
PRAMEF11-201ENST00000619922 HRCP23327 699 aa18.22■□□□□ 0.51
PRAMEF11-201ENST00000619922 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
PRAMEF11-201ENST00000619922 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
PRAMEF11-201ENST00000619922 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
PRAMEF11-201ENST00000619922 KIF21BO75037 1637 aa18.19■□□□□ 0.5
PRAMEF11-201ENST00000619922 TNIKQ9UKE5 1360 aa18.18■□□□□ 0.5
PRAMEF11-201ENST00000619922 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
PRAMEF11-201ENST00000619922 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
PRAMEF11-201ENST00000619922 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
PRAMEF11-201ENST00000619922 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
PRAMEF11-201ENST00000619922 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
PRAMEF11-201ENST00000619922 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
PRAMEF11-201ENST00000619922 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
PRAMEF11-201ENST00000619922 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.49
PRAMEF11-201ENST00000619922 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
PRAMEF11-201ENST00000619922 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
PRAMEF11-201ENST00000619922 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
PRAMEF11-201ENST00000619922 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
PRAMEF11-201ENST00000619922 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
PRAMEF11-201ENST00000619922 ERICH3Q5RHP9 1530 aa18.04■□□□□ 0.48
PRAMEF11-201ENST00000619922 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
PRAMEF11-201ENST00000619922 FBLN2P98095 1184 aa18.01■□□□□ 0.47
PRAMEF11-201ENST00000619922 GRIN2BQ13224 1484 aa18■□□□□ 0.47
PRAMEF11-201ENST00000619922 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms