RNA–Protein interactions for RNA: ENST00000618021.1

SGPL1-207, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 4

Gene SGPL1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-207ENST00000618021 NISCHQ9Y2I1 1504 aa26.32■■□□□ 1.8
SGPL1-207ENST00000618021 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
SGPL1-207ENST00000618021 ABCC9O60706 1549 aa22.64■■□□□ 1.21
SGPL1-207ENST00000618021 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
SGPL1-207ENST00000618021 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
SGPL1-207ENST00000618021 NACADO15069 1562 aa21.8■■□□□ 1.08
SGPL1-207ENST00000618021 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
SGPL1-207ENST00000618021 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
SGPL1-207ENST00000618021 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
SGPL1-207ENST00000618021 SCRIBQ14160 1630 aa21.3■■□□□ 1
SGPL1-207ENST00000618021 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
SGPL1-207ENST00000618021 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
SGPL1-207ENST00000618021 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
SGPL1-207ENST00000618021 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
SGPL1-207ENST00000618021 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
SGPL1-207ENST00000618021 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
SGPL1-207ENST00000618021 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
SGPL1-207ENST00000618021 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
SGPL1-207ENST00000618021 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
SGPL1-207ENST00000618021 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
SGPL1-207ENST00000618021 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.84
SGPL1-207ENST00000618021 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
SGPL1-207ENST00000618021 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
SGPL1-207ENST00000618021 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
SGPL1-207ENST00000618021 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
SGPL1-207ENST00000618021 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
SGPL1-207ENST00000618021 WIZO95785 1651 aa20.11■□□□□ 0.81
SGPL1-207ENST00000618021 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
SGPL1-207ENST00000618021 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
SGPL1-207ENST00000618021 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
SGPL1-207ENST00000618021 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
SGPL1-207ENST00000618021 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
SGPL1-207ENST00000618021 NESP48681 1621 aa19.66■□□□□ 0.74
SGPL1-207ENST00000618021 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
SGPL1-207ENST00000618021 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
SGPL1-207ENST00000618021 CFTRP13569 1480 aa19.52■□□□□ 0.72
SGPL1-207ENST00000618021 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
SGPL1-207ENST00000618021 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
SGPL1-207ENST00000618021 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
SGPL1-207ENST00000618021 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
SGPL1-207ENST00000618021 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
SGPL1-207ENST00000618021 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
SGPL1-207ENST00000618021 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
SGPL1-207ENST00000618021 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
SGPL1-207ENST00000618021 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
SGPL1-207ENST00000618021 WDR62O43379 1518 aa19.14■□□□□ 0.65
SGPL1-207ENST00000618021 CUX2O14529 1486 aa19.1■□□□□ 0.65
SGPL1-207ENST00000618021 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
SGPL1-207ENST00000618021 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
SGPL1-207ENST00000618021 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
SGPL1-207ENST00000618021 CUX1P39880 1505 aa19.05■□□□□ 0.64
SGPL1-207ENST00000618021 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
SGPL1-207ENST00000618021 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
SGPL1-207ENST00000618021 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
SGPL1-207ENST00000618021 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
SGPL1-207ENST00000618021 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
SGPL1-207ENST00000618021 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
SGPL1-207ENST00000618021 SOGA1O94964 1423 aa18.9■□□□□ 0.62
SGPL1-207ENST00000618021 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
SGPL1-207ENST00000618021 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
SGPL1-207ENST00000618021 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
SGPL1-207ENST00000618021 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
SGPL1-207ENST00000618021 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.61
SGPL1-207ENST00000618021 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
SGPL1-207ENST00000618021 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
SGPL1-207ENST00000618021 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
SGPL1-207ENST00000618021 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
SGPL1-207ENST00000618021 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
SGPL1-207ENST00000618021 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
SGPL1-207ENST00000618021 WDR97A6NE52 1622 aa18.71■□□□□ 0.58
SGPL1-207ENST00000618021 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
SGPL1-207ENST00000618021 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
SGPL1-207ENST00000618021 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
SGPL1-207ENST00000618021 KIF27Q86VH2 1401 aa18.58■□□□□ 0.57
SGPL1-207ENST00000618021 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
SGPL1-207ENST00000618021 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
SGPL1-207ENST00000618021 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
SGPL1-207ENST00000618021 FBLN2P98095 1184 aa18.54■□□□□ 0.56
SGPL1-207ENST00000618021 IGF1RP08069 1367 aa18.52■□□□□ 0.55
SGPL1-207ENST00000618021 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
SGPL1-207ENST00000618021 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
SGPL1-207ENST00000618021 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
SGPL1-207ENST00000618021 FAM9AQ8IZU1 332 aaPredicted RBP18.47■□□□□ 0.55
SGPL1-207ENST00000618021 SYNJ2O15056 1496 aa18.46■□□□□ 0.54
SGPL1-207ENST00000618021 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
SGPL1-207ENST00000618021 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
SGPL1-207ENST00000618021 ADAMTS12P58397 1594 aa18.43■□□□□ 0.54
SGPL1-207ENST00000618021 CHD1O14646 1710 aa18.42■□□□□ 0.54
SGPL1-207ENST00000618021 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
SGPL1-207ENST00000618021 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
SGPL1-207ENST00000618021 GRIN2AQ12879 1464 aa18.38■□□□□ 0.53
SGPL1-207ENST00000618021 CUL7Q14999 1698 aa18.34■□□□□ 0.53
SGPL1-207ENST00000618021 EEA1Q15075 1411 aa18.34■□□□□ 0.53
SGPL1-207ENST00000618021 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
SGPL1-207ENST00000618021 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
SGPL1-207ENST00000618021 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
SGPL1-207ENST00000618021 NUP160Q12769 1436 aa18.28■□□□□ 0.52
SGPL1-207ENST00000618021 CEP170Q5SW79 1584 aa18.28■□□□□ 0.52
SGPL1-207ENST00000618021 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
SGPL1-207ENST00000618021 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms