RNA–Protein interactions for RNA: ENST00000618007.4

TPTE-204, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TPTE, Length 2,150 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-204ENST00000618007 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
TPTE-204ENST00000618007 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
TPTE-204ENST00000618007 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
TPTE-204ENST00000618007 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
TPTE-204ENST00000618007 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
TPTE-204ENST00000618007 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
TPTE-204ENST00000618007 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
TPTE-204ENST00000618007 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
TPTE-204ENST00000618007 ABCC9O60706 1549 aa19.76■□□□□ 0.75
TPTE-204ENST00000618007 NACADO15069 1562 aa19.67■□□□□ 0.74
TPTE-204ENST00000618007 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
TPTE-204ENST00000618007 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
TPTE-204ENST00000618007 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
TPTE-204ENST00000618007 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
TPTE-204ENST00000618007 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
TPTE-204ENST00000618007 MROH2BQ7Z745 1585 aa18.97■□□□□ 0.63
TPTE-204ENST00000618007 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
TPTE-204ENST00000618007 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
TPTE-204ENST00000618007 WIZO95785 1651 aa18.8■□□□□ 0.6
TPTE-204ENST00000618007 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPTE-204ENST00000618007 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
TPTE-204ENST00000618007 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
TPTE-204ENST00000618007 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
TPTE-204ENST00000618007 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
TPTE-204ENST00000618007 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
TPTE-204ENST00000618007 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
TPTE-204ENST00000618007 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
TPTE-204ENST00000618007 SMARCA2P51531 1590 aa18.46■□□□□ 0.54
TPTE-204ENST00000618007 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
TPTE-204ENST00000618007 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
TPTE-204ENST00000618007 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
TPTE-204ENST00000618007 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
TPTE-204ENST00000618007 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
TPTE-204ENST00000618007 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
TPTE-204ENST00000618007 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
TPTE-204ENST00000618007 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.48
TPTE-204ENST00000618007 EEA1Q15075 1411 aa18.03■□□□□ 0.48
TPTE-204ENST00000618007 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
TPTE-204ENST00000618007 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
TPTE-204ENST00000618007 SOGA1O94964 1423 aa17.99■□□□□ 0.47
TPTE-204ENST00000618007 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
TPTE-204ENST00000618007 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
TPTE-204ENST00000618007 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
TPTE-204ENST00000618007 CFTRP13569 1480 aa17.89■□□□□ 0.45
TPTE-204ENST00000618007 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
TPTE-204ENST00000618007 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
TPTE-204ENST00000618007 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
TPTE-204ENST00000618007 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
TPTE-204ENST00000618007 HRCP23327 699 aa17.8■□□□□ 0.44
TPTE-204ENST00000618007 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
TPTE-204ENST00000618007 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
TPTE-204ENST00000618007 GOLGA3Q08378 1498 aa17.77■□□□□ 0.44
TPTE-204ENST00000618007 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
TPTE-204ENST00000618007 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
TPTE-204ENST00000618007 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
TPTE-204ENST00000618007 CUX1P39880 1505 aa17.7■□□□□ 0.42
TPTE-204ENST00000618007 KIF21BO75037 1637 aa17.69■□□□□ 0.42
TPTE-204ENST00000618007 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
TPTE-204ENST00000618007 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
TPTE-204ENST00000618007 RAPGEF2Q9Y4G8 1499 aa17.58■□□□□ 0.4
TPTE-204ENST00000618007 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
TPTE-204ENST00000618007 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
TPTE-204ENST00000618007 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
TPTE-204ENST00000618007 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
TPTE-204ENST00000618007 CLIP1P30622 1438 aa17.53■□□□□ 0.4
TPTE-204ENST00000618007 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
TPTE-204ENST00000618007 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
TPTE-204ENST00000618007 CUX2O14529 1486 aa17.45■□□□□ 0.38
TPTE-204ENST00000618007 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
TPTE-204ENST00000618007 NESP48681 1621 aa17.45■□□□□ 0.38
TPTE-204ENST00000618007 IGF1RP08069 1367 aa17.44■□□□□ 0.38
TPTE-204ENST00000618007 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
TPTE-204ENST00000618007 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
TPTE-204ENST00000618007 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
TPTE-204ENST00000618007 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
TPTE-204ENST00000618007 APLP2Q06481 763 aa17.38■□□□□ 0.37
TPTE-204ENST00000618007 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
TPTE-204ENST00000618007 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
TPTE-204ENST00000618007 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
TPTE-204ENST00000618007 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
TPTE-204ENST00000618007 ABCA10Q8WWZ4 1543 aa17.33■□□□□ 0.36
TPTE-204ENST00000618007 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.36
TPTE-204ENST00000618007 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
TPTE-204ENST00000618007 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
TPTE-204ENST00000618007 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
TPTE-204ENST00000618007 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
TPTE-204ENST00000618007 CCER1Q8TC90 406 aaPredicted RBP17.18■□□□□ 0.34
TPTE-204ENST00000618007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
TPTE-204ENST00000618007 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
TPTE-204ENST00000618007 CUL7Q14999 1698 aa17.15■□□□□ 0.34
TPTE-204ENST00000618007 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.34
TPTE-204ENST00000618007 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
TPTE-204ENST00000618007 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
TPTE-204ENST00000618007 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
TPTE-204ENST00000618007 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
TPTE-204ENST00000618007 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
TPTE-204ENST00000618007 FHAD1B1AJZ9 1412 aa17.06■□□□□ 0.32
TPTE-204ENST00000618007 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
TPTE-204ENST00000618007 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
TPTE-204ENST00000618007 MAP3K1Q13233 1512 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms