RNA–Protein interactions for RNA: ENST00000617454.4

PDE4DIP-244, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 3

Gene PDE4DIP, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-244ENST00000617454 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
PDE4DIP-244ENST00000617454 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
PDE4DIP-244ENST00000617454 ABCC9O60706 1549 aa22.57■■□□□ 1.2
PDE4DIP-244ENST00000617454 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
PDE4DIP-244ENST00000617454 DCAF8L2P0C7V8 631 aa21.75■■□□□ 1.07
PDE4DIP-244ENST00000617454 NACADO15069 1562 aa21.74■■□□□ 1.07
PDE4DIP-244ENST00000617454 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
PDE4DIP-244ENST00000617454 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
PDE4DIP-244ENST00000617454 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
PDE4DIP-244ENST00000617454 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
PDE4DIP-244ENST00000617454 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
PDE4DIP-244ENST00000617454 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
PDE4DIP-244ENST00000617454 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
PDE4DIP-244ENST00000617454 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
PDE4DIP-244ENST00000617454 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
PDE4DIP-244ENST00000617454 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
PDE4DIP-244ENST00000617454 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
PDE4DIP-244ENST00000617454 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
PDE4DIP-244ENST00000617454 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
PDE4DIP-244ENST00000617454 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
PDE4DIP-244ENST00000617454 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
PDE4DIP-244ENST00000617454 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
PDE4DIP-244ENST00000617454 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
PDE4DIP-244ENST00000617454 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
PDE4DIP-244ENST00000617454 HMGXB3Q12766 1538 aa19.96■□□□□ 0.79
PDE4DIP-244ENST00000617454 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
PDE4DIP-244ENST00000617454 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
PDE4DIP-244ENST00000617454 WIZO95785 1651 aa19.78■□□□□ 0.76
PDE4DIP-244ENST00000617454 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
PDE4DIP-244ENST00000617454 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
PDE4DIP-244ENST00000617454 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
PDE4DIP-244ENST00000617454 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
PDE4DIP-244ENST00000617454 NESP48681 1621 aa19.5■□□□□ 0.71
PDE4DIP-244ENST00000617454 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
PDE4DIP-244ENST00000617454 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
PDE4DIP-244ENST00000617454 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
PDE4DIP-244ENST00000617454 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
PDE4DIP-244ENST00000617454 CFTRP13569 1480 aa19.33■□□□□ 0.68
PDE4DIP-244ENST00000617454 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
PDE4DIP-244ENST00000617454 CUX2O14529 1486 aa19.29■□□□□ 0.68
PDE4DIP-244ENST00000617454 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
PDE4DIP-244ENST00000617454 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
PDE4DIP-244ENST00000617454 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
PDE4DIP-244ENST00000617454 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
PDE4DIP-244ENST00000617454 MRC2Q9UBG0 1479 aa19.2■□□□□ 0.66
PDE4DIP-244ENST00000617454 WDR62O43379 1518 aa19.11■□□□□ 0.65
PDE4DIP-244ENST00000617454 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
PDE4DIP-244ENST00000617454 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
PDE4DIP-244ENST00000617454 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
PDE4DIP-244ENST00000617454 DNMBPQ6XZF7 1577 aa18.92■□□□□ 0.62
PDE4DIP-244ENST00000617454 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
PDE4DIP-244ENST00000617454 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
PDE4DIP-244ENST00000617454 CUX1P39880 1505 aa18.75■□□□□ 0.59
PDE4DIP-244ENST00000617454 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
PDE4DIP-244ENST00000617454 SOGA1O94964 1423 aa18.7■□□□□ 0.58
PDE4DIP-244ENST00000617454 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.581e-7■■■■■ 66.8
PDE4DIP-244ENST00000617454 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
PDE4DIP-244ENST00000617454 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
PDE4DIP-244ENST00000617454 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
PDE4DIP-244ENST00000617454 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.58
PDE4DIP-244ENST00000617454 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
PDE4DIP-244ENST00000617454 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
PDE4DIP-244ENST00000617454 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
PDE4DIP-244ENST00000617454 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
PDE4DIP-244ENST00000617454 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
PDE4DIP-244ENST00000617454 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.57
PDE4DIP-244ENST00000617454 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
PDE4DIP-244ENST00000617454 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
PDE4DIP-244ENST00000617454 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
PDE4DIP-244ENST00000617454 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
PDE4DIP-244ENST00000617454 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
PDE4DIP-244ENST00000617454 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.54
PDE4DIP-244ENST00000617454 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
PDE4DIP-244ENST00000617454 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
PDE4DIP-244ENST00000617454 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
PDE4DIP-244ENST00000617454 FBLN2P98095 1184 aa18.44■□□□□ 0.54
PDE4DIP-244ENST00000617454 CHD1O14646 1710 aa18.41■□□□□ 0.54
PDE4DIP-244ENST00000617454 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
PDE4DIP-244ENST00000617454 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
PDE4DIP-244ENST00000617454 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
PDE4DIP-244ENST00000617454 KIF27Q86VH2 1401 aa18.33■□□□□ 0.53
PDE4DIP-244ENST00000617454 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
PDE4DIP-244ENST00000617454 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
PDE4DIP-244ENST00000617454 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
PDE4DIP-244ENST00000617454 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
PDE4DIP-244ENST00000617454 CUL7Q14999 1698 aa18.21■□□□□ 0.51
PDE4DIP-244ENST00000617454 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
PDE4DIP-244ENST00000617454 IGF1RP08069 1367 aa18.17■□□□□ 0.5
PDE4DIP-244ENST00000617454 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
PDE4DIP-244ENST00000617454 RIMBP3CA6NJZ7 1639 aa18.15■□□□□ 0.5
PDE4DIP-244ENST00000617454 RIMBP3BA6NNM3 1639 aa18.15■□□□□ 0.5
PDE4DIP-244ENST00000617454 RIMBP3Q9UFD9 1639 aa18.15■□□□□ 0.5
PDE4DIP-244ENST00000617454 NUP160Q12769 1436 aa18.14■□□□□ 0.49
PDE4DIP-244ENST00000617454 CARMIL1Q5VZK9 1371 aa18.12■□□□□ 0.49
PDE4DIP-244ENST00000617454 CEP170Q5SW79 1584 aa18.12■□□□□ 0.49
PDE4DIP-244ENST00000617454 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
PDE4DIP-244ENST00000617454 RAPGEF2Q9Y4G8 1499 aa18.02■□□□□ 0.48
PDE4DIP-244ENST00000617454 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
PDE4DIP-244ENST00000617454 EEA1Q15075 1411 aa18■□□□□ 0.47
PDE4DIP-244ENST00000617454 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms