RNA–Protein interactions for RNA: ENST00000617377.1

ZC3H12B-202, Transcript of zinc finger CCCH-type containing 12B, humanhuman

TSL 5

Gene ZC3H12B, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12B-202ENST00000617377 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
ZC3H12B-202ENST00000617377 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
ZC3H12B-202ENST00000617377 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
ZC3H12B-202ENST00000617377 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
ZC3H12B-202ENST00000617377 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
ZC3H12B-202ENST00000617377 ABCC9O60706 1549 aa14.5□□□□□ -0.09
ZC3H12B-202ENST00000617377 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
ZC3H12B-202ENST00000617377 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
ZC3H12B-202ENST00000617377 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
ZC3H12B-202ENST00000617377 NACADO15069 1562 aa13.78□□□□□ -0.2
ZC3H12B-202ENST00000617377 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
ZC3H12B-202ENST00000617377 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
ZC3H12B-202ENST00000617377 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
ZC3H12B-202ENST00000617377 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
ZC3H12B-202ENST00000617377 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.24
ZC3H12B-202ENST00000617377 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
ZC3H12B-202ENST00000617377 DNAJC5BQ9UF47 199 aa13.5□□□□□ -0.25
ZC3H12B-202ENST00000617377 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
ZC3H12B-202ENST00000617377 SCRIBQ14160 1630 aa13.37□□□□□ -0.27
ZC3H12B-202ENST00000617377 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
ZC3H12B-202ENST00000617377 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
ZC3H12B-202ENST00000617377 EIF4G1Q04637 1599 aaKnown RBP13.14□□□□□ -0.31
ZC3H12B-202ENST00000617377 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
ZC3H12B-202ENST00000617377 ADRA2BP18089 450 aa13.02□□□□□ -0.32
ZC3H12B-202ENST00000617377 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
ZC3H12B-202ENST00000617377 FOXD1Q16676 465 aa12.87□□□□□ -0.35
ZC3H12B-202ENST00000617377 KCNA4P22459 653 aa12.84□□□□□ -0.35
ZC3H12B-202ENST00000617377 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
ZC3H12B-202ENST00000617377 SMARCA4P51532 1647 aa12.76□□□□□ -0.37
ZC3H12B-202ENST00000617377 NCAPD3P42695 1498 aa12.71□□□□□ -0.37
ZC3H12B-202ENST00000617377 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
ZC3H12B-202ENST00000617377 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
ZC3H12B-202ENST00000617377 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
ZC3H12B-202ENST00000617377 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
ZC3H12B-202ENST00000617377 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
ZC3H12B-202ENST00000617377 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
ZC3H12B-202ENST00000617377 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
ZC3H12B-202ENST00000617377 BAZ1BQ9UIG0 1483 aaKnown RBP12.57□□□□□ -0.4
ZC3H12B-202ENST00000617377 NESP48681 1621 aa12.52□□□□□ -0.4
ZC3H12B-202ENST00000617377 WIZO95785 1651 aa12.5□□□□□ -0.41
ZC3H12B-202ENST00000617377 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
ZC3H12B-202ENST00000617377 CUX2O14529 1486 aa12.43□□□□□ -0.42
ZC3H12B-202ENST00000617377 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
ZC3H12B-202ENST00000617377 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
ZC3H12B-202ENST00000617377 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
ZC3H12B-202ENST00000617377 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
ZC3H12B-202ENST00000617377 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
ZC3H12B-202ENST00000617377 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
ZC3H12B-202ENST00000617377 SUPT5HO00267 1087 aaKnown RBP12.37□□□□□ -0.43
ZC3H12B-202ENST00000617377 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
ZC3H12B-202ENST00000617377 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
ZC3H12B-202ENST00000617377 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
ZC3H12B-202ENST00000617377 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
ZC3H12B-202ENST00000617377 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
ZC3H12B-202ENST00000617377 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
ZC3H12B-202ENST00000617377 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
ZC3H12B-202ENST00000617377 WDR62O43379 1518 aa12.23□□□□□ -0.45
ZC3H12B-202ENST00000617377 CFTRP13569 1480 aa12.22□□□□□ -0.45
ZC3H12B-202ENST00000617377 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
ZC3H12B-202ENST00000617377 PRDM2Q13029 1718 aa12.21□□□□□ -0.46
ZC3H12B-202ENST00000617377 FANCD2Q9BXW9 1451 aa12.19□□□□□ -0.46
ZC3H12B-202ENST00000617377 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
ZC3H12B-202ENST00000617377 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
ZC3H12B-202ENST00000617377 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
ZC3H12B-202ENST00000617377 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
ZC3H12B-202ENST00000617377 MSH5O43196 834 aa12□□□□□ -0.49
ZC3H12B-202ENST00000617377 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
ZC3H12B-202ENST00000617377 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
ZC3H12B-202ENST00000617377 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
ZC3H12B-202ENST00000617377 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
ZC3H12B-202ENST00000617377 TARBP1Q13395 1621 aaKnown RBP11.92□□□□□ -0.5
ZC3H12B-202ENST00000617377 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
ZC3H12B-202ENST00000617377 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
ZC3H12B-202ENST00000617377 ABCC8Q09428 1581 aa11.9□□□□□ -0.5
ZC3H12B-202ENST00000617377 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
ZC3H12B-202ENST00000617377 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
ZC3H12B-202ENST00000617377 CUX1P39880 1505 aa11.86□□□□□ -0.51
ZC3H12B-202ENST00000617377 CHD1O14646 1710 aa11.83□□□□□ -0.52
ZC3H12B-202ENST00000617377 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
ZC3H12B-202ENST00000617377 AQRO60306 1485 aaKnown RBP eCLIP11.82□□□□□ -0.52
ZC3H12B-202ENST00000617377 FGD5Q6ZNL6 1462 aa11.82□□□□□ -0.52
ZC3H12B-202ENST00000617377 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
ZC3H12B-202ENST00000617377 ZBTB22O15209 634 aa11.8□□□□□ -0.52
ZC3H12B-202ENST00000617377 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
ZC3H12B-202ENST00000617377 RIMBP3CA6NJZ7 1639 aa11.77□□□□□ -0.53
ZC3H12B-202ENST00000617377 RIMBP3BA6NNM3 1639 aa11.77□□□□□ -0.53
ZC3H12B-202ENST00000617377 RIMBP3Q9UFD9 1639 aa11.77□□□□□ -0.53
ZC3H12B-202ENST00000617377 SOGA1O94964 1423 aa11.77□□□□□ -0.53
ZC3H12B-202ENST00000617377 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
ZC3H12B-202ENST00000617377 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
ZC3H12B-202ENST00000617377 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
ZC3H12B-202ENST00000617377 SNAPC4Q5SXM2 1469 aa11.73□□□□□ -0.53
ZC3H12B-202ENST00000617377 ARHGEF11O15085 1522 aa11.72□□□□□ -0.53
ZC3H12B-202ENST00000617377 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
ZC3H12B-202ENST00000617377 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
ZC3H12B-202ENST00000617377 SYNJ1O43426 1573 aa11.71□□□□□ -0.53
ZC3H12B-202ENST00000617377 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
ZC3H12B-202ENST00000617377 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
ZC3H12B-202ENST00000617377 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
ZC3H12B-202ENST00000617377 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms