RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
LINC00598-207ENST00000616706 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
LINC00598-207ENST00000616706 ABCC9O60706 1549 aa19.35■□□□□ 0.69
LINC00598-207ENST00000616706 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
LINC00598-207ENST00000616706 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
LINC00598-207ENST00000616706 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
LINC00598-207ENST00000616706 NACADO15069 1562 aa18.81■□□□□ 0.6
LINC00598-207ENST00000616706 MYO15BQ96JP2 1530 aa18.81■□□□□ 0.6
LINC00598-207ENST00000616706 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
LINC00598-207ENST00000616706 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
LINC00598-207ENST00000616706 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
LINC00598-207ENST00000616706 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
LINC00598-207ENST00000616706 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
LINC00598-207ENST00000616706 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
LINC00598-207ENST00000616706 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
LINC00598-207ENST00000616706 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
LINC00598-207ENST00000616706 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
LINC00598-207ENST00000616706 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
LINC00598-207ENST00000616706 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
LINC00598-207ENST00000616706 SMARCA4P51532 1647 aa17.71■□□□□ 0.43
LINC00598-207ENST00000616706 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
LINC00598-207ENST00000616706 WIZO95785 1651 aa17.63■□□□□ 0.41
LINC00598-207ENST00000616706 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
LINC00598-207ENST00000616706 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
LINC00598-207ENST00000616706 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
LINC00598-207ENST00000616706 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
LINC00598-207ENST00000616706 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
LINC00598-207ENST00000616706 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
LINC00598-207ENST00000616706 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
LINC00598-207ENST00000616706 NCAPD3P42695 1498 aa17.39■□□□□ 0.38
LINC00598-207ENST00000616706 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.37
LINC00598-207ENST00000616706 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
LINC00598-207ENST00000616706 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
LINC00598-207ENST00000616706 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
LINC00598-207ENST00000616706 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
LINC00598-207ENST00000616706 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
LINC00598-207ENST00000616706 CFTRP13569 1480 aa16.95■□□□□ 0.3
LINC00598-207ENST00000616706 NESP48681 1621 aa16.9■□□□□ 0.3
LINC00598-207ENST00000616706 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
LINC00598-207ENST00000616706 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
LINC00598-207ENST00000616706 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
LINC00598-207ENST00000616706 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
LINC00598-207ENST00000616706 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
LINC00598-207ENST00000616706 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
LINC00598-207ENST00000616706 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
LINC00598-207ENST00000616706 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
LINC00598-207ENST00000616706 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
LINC00598-207ENST00000616706 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
LINC00598-207ENST00000616706 CUX1P39880 1505 aa16.64■□□□□ 0.26
LINC00598-207ENST00000616706 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
LINC00598-207ENST00000616706 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
LINC00598-207ENST00000616706 HRCP23327 699 aa16.6■□□□□ 0.25
LINC00598-207ENST00000616706 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
LINC00598-207ENST00000616706 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
LINC00598-207ENST00000616706 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
LINC00598-207ENST00000616706 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
LINC00598-207ENST00000616706 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
LINC00598-207ENST00000616706 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
LINC00598-207ENST00000616706 SOGA1O94964 1423 aa16.53■□□□□ 0.24
LINC00598-207ENST00000616706 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.23
LINC00598-207ENST00000616706 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
LINC00598-207ENST00000616706 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
LINC00598-207ENST00000616706 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
LINC00598-207ENST00000616706 POLA1P09884 1462 aaPredicted RBP16.45■□□□□ 0.22
LINC00598-207ENST00000616706 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
LINC00598-207ENST00000616706 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
LINC00598-207ENST00000616706 EEA1Q15075 1411 aa16.42■□□□□ 0.22
LINC00598-207ENST00000616706 WDR62O43379 1518 aa16.4■□□□□ 0.22
LINC00598-207ENST00000616706 CUX2O14529 1486 aa16.39■□□□□ 0.21
LINC00598-207ENST00000616706 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
LINC00598-207ENST00000616706 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
LINC00598-207ENST00000616706 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
LINC00598-207ENST00000616706 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
LINC00598-207ENST00000616706 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
LINC00598-207ENST00000616706 KIF21BO75037 1637 aa16.3■□□□□ 0.2
LINC00598-207ENST00000616706 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
LINC00598-207ENST00000616706 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
LINC00598-207ENST00000616706 IFT140Q96RY7 1462 aa16.28■□□□□ 0.2
LINC00598-207ENST00000616706 IGF1RP08069 1367 aa16.28■□□□□ 0.2
LINC00598-207ENST00000616706 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
LINC00598-207ENST00000616706 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
LINC00598-207ENST00000616706 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00598-207ENST00000616706 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
LINC00598-207ENST00000616706 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
LINC00598-207ENST00000616706 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
LINC00598-207ENST00000616706 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
LINC00598-207ENST00000616706 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
LINC00598-207ENST00000616706 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
LINC00598-207ENST00000616706 PRXQ9BXM0 1461 aa16.17■□□□□ 0.18
LINC00598-207ENST00000616706 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
LINC00598-207ENST00000616706 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
LINC00598-207ENST00000616706 GRIN2BQ13224 1484 aa16.13■□□□□ 0.17
LINC00598-207ENST00000616706 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
LINC00598-207ENST00000616706 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
LINC00598-207ENST00000616706 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
LINC00598-207ENST00000616706 FBLN2P98095 1184 aa16.06■□□□□ 0.16
LINC00598-207ENST00000616706 CUL7Q14999 1698 aa16.06■□□□□ 0.16
LINC00598-207ENST00000616706 SNAPC4Q5SXM2 1469 aa16.06■□□□□ 0.16
LINC00598-207ENST00000616706 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
LINC00598-207ENST00000616706 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms