RNA–Protein interactions for RNA: ENST00000616386.1

PVT1-224, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 113 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-224ENST00000616386 NISCHQ9Y2I1 1504 aa5.97□□□□□ -1.45
PVT1-224ENST00000616386 ABCC9O60706 1549 aa5.78□□□□□ -1.48
PVT1-224ENST00000616386 DNAJC5BQ9UF47 199 aa5.6□□□□□ -1.51
PVT1-224ENST00000616386 DCAF8L2P0C7V8 631 aa5.45□□□□□ -1.54
PVT1-224ENST00000616386 PABPN1Q86U42 306 aaKnown RBP eCLIP5.43□□□□□ -1.54
PVT1-224ENST00000616386 CCDC180Q9P1Z9 1646 aa5.36□□□□□ -1.55
PVT1-224ENST00000616386 RB1CC1Q8TDY2 1594 aa5.28□□□□□ -1.56
PVT1-224ENST00000616386 DNAJC5Q9H3Z4 198 aa5.24□□□□□ -1.57
PVT1-224ENST00000616386 CECR2Q9BXF3 1484 aa5.17□□□□□ -1.58
PVT1-224ENST00000616386 NACADO15069 1562 aa5.16□□□□□ -1.58
PVT1-224ENST00000616386 CC2D2AQ9P2K1 1620 aa5.12□□□□□ -1.59
PVT1-224ENST00000616386 UNC13AQ9UPW8 1703 aa5.12□□□□□ -1.59
PVT1-224ENST00000616386 TRIM41Q8WV44 630 aa5.12□□□□□ -1.59
PVT1-224ENST00000616386 BICRAQ9NZM4 1560 aa5.11□□□□□ -1.59
PVT1-224ENST00000616386 SCRIBQ14160 1630 aa5.05□□□□□ -1.6
PVT1-224ENST00000616386 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
PVT1-224ENST00000616386 ERCC6Q03468 1493 aa5□□□□□ -1.61
PVT1-224ENST00000616386 CUX2O14529 1486 aa4.93□□□□□ -1.62
PVT1-224ENST00000616386 MYO15BQ96JP2 1530 aa4.92□□□□□ -1.62
PVT1-224ENST00000616386 SHROOM4Q9ULL8 1493 aa4.9□□□□□ -1.62
PVT1-224ENST00000616386 NESP48681 1621 aa4.88□□□□□ -1.63
PVT1-224ENST00000616386 ZCCHC6Q5VYS8 1495 aaKnown RBP4.88□□□□□ -1.63
PVT1-224ENST00000616386 AEBP2Q6ZN18 517 aaPredicted RBP4.86□□□□□ -1.63
PVT1-224ENST00000616386 TRHP20396 242 aaPredicted RBP4.85□□□□□ -1.63
PVT1-224ENST00000616386 SMARCA2P51531 1590 aa4.84□□□□□ -1.63
PVT1-224ENST00000616386 OSCARQ8IYS5 282 aa4.8□□□□□ -1.64
PVT1-224ENST00000616386 DCAF1Q9Y4B6 1507 aa4.8□□□□□ -1.64
PVT1-224ENST00000616386 NCAPD3P42695 1498 aa4.78□□□□□ -1.64
PVT1-224ENST00000616386 ATAD2BQ9ULI0 1458 aa4.78□□□□□ -1.64
PVT1-224ENST00000616386 CYB5RLQ6IPT4 315 aa4.77□□□□□ -1.65
PVT1-224ENST00000616386 THOC2Q8NI27 1593 aaKnown RBP4.76□□□□□ -1.65
PVT1-224ENST00000616386 BAZ1BQ9UIG0 1483 aaKnown RBP4.75□□□□□ -1.65
PVT1-224ENST00000616386 KIF21AQ7Z4S6 1674 aa4.74□□□□□ -1.65
PVT1-224ENST00000616386 PDS5BQ9NTI5 1447 aa4.74□□□□□ -1.65
PVT1-224ENST00000616386 FBLN2P98095 1184 aa4.73□□□□□ -1.65
PVT1-224ENST00000616386 BAZ1AQ9NRL2 1556 aaPredicted RBP4.73□□□□□ -1.65
PVT1-224ENST00000616386 MRC2Q9UBG0 1479 aa4.71□□□□□ -1.66
PVT1-224ENST00000616386 SMARCA4P51532 1647 aa4.7□□□□□ -1.66
PVT1-224ENST00000616386 LAMC3Q9Y6N6 1575 aa4.7□□□□□ -1.66
PVT1-224ENST00000616386 HMGXB3Q12766 1538 aa4.69□□□□□ -1.66
PVT1-224ENST00000616386 RIMBP3CA6NJZ7 1639 aa4.68□□□□□ -1.66
PVT1-224ENST00000616386 RIMBP3BA6NNM3 1639 aa4.68□□□□□ -1.66
PVT1-224ENST00000616386 RIMBP3Q9UFD9 1639 aa4.68□□□□□ -1.66
PVT1-224ENST00000616386 CADPSQ9ULU8 1353 aa4.68□□□□□ -1.66
PVT1-224ENST00000616386 CEP164Q9UPV0 1460 aa4.67□□□□□ -1.66
PVT1-224ENST00000616386 FANCD2Q9BXW9 1451 aa4.65□□□□□ -1.66
PVT1-224ENST00000616386 ARHGEF11O15085 1522 aa4.65□□□□□ -1.67
PVT1-224ENST00000616386 WDR62O43379 1518 aa4.65□□□□□ -1.67
PVT1-224ENST00000616386 MROH2BQ7Z745 1585 aa4.65□□□□□ -1.67
PVT1-224ENST00000616386 ZNF608Q9ULD9 1512 aaPredicted RBP4.62□□□□□ -1.67
PVT1-224ENST00000616386 ILDR1Q86SU0 546 aaPredicted RBP4.61□□□□□ -1.67
PVT1-224ENST00000616386 URB2Q14146 1524 aaKnown RBP4.61□□□□□ -1.67
PVT1-224ENST00000616386 WIZO95785 1651 aa4.59□□□□□ -1.67
PVT1-224ENST00000616386 ARAP1Q96P48 1450 aa4.59□□□□□ -1.67
PVT1-224ENST00000616386 AQRO60306 1485 aaKnown RBP eCLIP4.58□□□□□ -1.68
PVT1-224ENST00000616386 CHMP7Q8WUX9 453 aaPredicted RBP4.58□□□□□ -1.68
PVT1-224ENST00000616386 PEG3Q9GZU2 1588 aa4.56□□□□□ -1.68
PVT1-224ENST00000616386 IFT140Q96RY7 1462 aa4.55□□□□□ -1.68
PVT1-224ENST00000616386 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
PVT1-224ENST00000616386 CHD1O14646 1710 aa4.54□□□□□ -1.68
PVT1-224ENST00000616386 CFTRP13569 1480 aa4.54□□□□□ -1.68
PVT1-224ENST00000616386 EIF4G3O43432 1585 aaKnown RBP4.53□□□□□ -1.69
PVT1-224ENST00000616386 TTBK1Q5TCY1 1321 aaPredicted RBP4.52□□□□□ -1.69
PVT1-224ENST00000616386 TOPBP1Q92547 1522 aa4.51□□□□□ -1.69
PVT1-224ENST00000616386 RAD54L2Q9Y4B4 1467 aa4.51□□□□□ -1.69
PVT1-224ENST00000616386 RSF1Q96T23 1441 aaPredicted RBP4.5□□□□□ -1.69
PVT1-224ENST00000616386 SNAPC4Q5SXM2 1469 aa4.49□□□□□ -1.69
PVT1-224ENST00000616386 SOGA1O94964 1423 aa4.49□□□□□ -1.69
PVT1-224ENST00000616386 KDM4FA0A1W2PPD8 638 aa4.49□□□□□ -1.69
PVT1-224ENST00000616386 FAM69CQ0P6D2 419 aa4.49□□□□□ -1.69
PVT1-224ENST00000616386 GAPVD1Q14C86 1478 aa4.49□□□□□ -1.69
PVT1-224ENST00000616386 NPM1P06748 294 aaKnown RBP eCLIP4.47□□□□□ -1.69
PVT1-224ENST00000616386 CCDC88BA6NC98 1476 aa4.47□□□□□ -1.69
PVT1-224ENST00000616386 SYNJ1O43426 1573 aa4.46□□□□□ -1.7
PVT1-224ENST00000616386 TOP2AP11388 1531 aaKnown RBP4.46□□□□□ -1.7
PVT1-224ENST00000616386 DNMBPQ6XZF7 1577 aa4.45□□□□□ -1.7
PVT1-224ENST00000616386 POLA1P09884 1462 aaPredicted RBP4.45□□□□□ -1.7
PVT1-224ENST00000616386 ABCC8Q09428 1581 aa4.44□□□□□ -1.7
PVT1-224ENST00000616386 ERCC6L2Q5T890 1561 aa4.44□□□□□ -1.7
PVT1-224ENST00000616386 TARBP1Q13395 1621 aaKnown RBP4.44□□□□□ -1.7
PVT1-224ENST00000616386 CLASP1Q7Z460 1538 aa4.43□□□□□ -1.7
PVT1-224ENST00000616386 PLPPR3Q6T4P5 718 aa4.43□□□□□ -1.7
PVT1-224ENST00000616386 GRIN2BQ13224 1484 aa4.43□□□□□ -1.7
PVT1-224ENST00000616386 FGD5Q6ZNL6 1462 aa4.43□□□□□ -1.7
PVT1-224ENST00000616386 SYNJ2O15056 1496 aa4.42□□□□□ -1.7
PVT1-224ENST00000616386 PRDM2Q13029 1718 aa4.41□□□□□ -1.7
PVT1-224ENST00000616386 MAGI1Q96QZ7 1491 aaPredicted RBP4.4□□□□□ -1.71
PVT1-224ENST00000616386 TSPOAP1O95153 1857 aa4.4□□□□□ -1.71
PVT1-224ENST00000616386 KDM6BO15054 1643 aa4.39□□□□□ -1.71
PVT1-224ENST00000616386 PRG4Q92954 1404 aaPredicted RBP4.38□□□□□ -1.71
PVT1-224ENST00000616386 JPH4Q96JJ6 628 aa4.38□□□□□ -1.71
PVT1-224ENST00000616386 CEP170Q5SW79 1584 aa4.38□□□□□ -1.71
PVT1-224ENST00000616386 ADGRL1O94910 1474 aa4.37□□□□□ -1.71
PVT1-224ENST00000616386 CUX1P39880 1505 aa4.37□□□□□ -1.71
PVT1-224ENST00000616386 FBXO41Q8TF61 875 aa4.37□□□□□ -1.71
PVT1-224ENST00000616386 KIF13AQ9H1H9 1805 aa4.37□□□□□ -1.71
PVT1-224ENST00000616386 GRIN2AQ12879 1464 aa4.37□□□□□ -1.71
PVT1-224ENST00000616386 HECW2Q9P2P5 1572 aa4.36□□□□□ -1.71
PVT1-224ENST00000616386 PBRM1Q86U86 1689 aa4.36□□□□□ -1.71
PVT1-224ENST00000616386 LMTK3Q96Q04 1460 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms