RNA–Protein interactions for RNA: ENST00000616338.1

AL139220.2-212, humanhuman

TSL 4

Gene AL139220.2, Length 707 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139220.2-212ENST00000616338 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
AL139220.2-212ENST00000616338 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
AL139220.2-212ENST00000616338 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
AL139220.2-212ENST00000616338 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
AL139220.2-212ENST00000616338 ABCC9O60706 1549 aa18.55■□□□□ 0.56
AL139220.2-212ENST00000616338 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
AL139220.2-212ENST00000616338 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
AL139220.2-212ENST00000616338 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
AL139220.2-212ENST00000616338 NACADO15069 1562 aa17.81■□□□□ 0.44
AL139220.2-212ENST00000616338 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
AL139220.2-212ENST00000616338 ZCCHC6Q5VYS8 1495 aaKnown RBP17.74■□□□□ 0.43
AL139220.2-212ENST00000616338 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
AL139220.2-212ENST00000616338 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
AL139220.2-212ENST00000616338 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
AL139220.2-212ENST00000616338 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
AL139220.2-212ENST00000616338 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
AL139220.2-212ENST00000616338 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
AL139220.2-212ENST00000616338 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
AL139220.2-212ENST00000616338 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
AL139220.2-212ENST00000616338 FOXD1Q16676 465 aa16.98■□□□□ 0.31
AL139220.2-212ENST00000616338 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
AL139220.2-212ENST00000616338 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
AL139220.2-212ENST00000616338 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
AL139220.2-212ENST00000616338 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
AL139220.2-212ENST00000616338 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
AL139220.2-212ENST00000616338 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
AL139220.2-212ENST00000616338 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
AL139220.2-212ENST00000616338 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
AL139220.2-212ENST00000616338 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
AL139220.2-212ENST00000616338 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
AL139220.2-212ENST00000616338 RSF1Q96T23 1441 aaPredicted RBP16.35■□□□□ 0.21
AL139220.2-212ENST00000616338 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
AL139220.2-212ENST00000616338 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
AL139220.2-212ENST00000616338 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
AL139220.2-212ENST00000616338 HMGXB3Q12766 1538 aa16.3■□□□□ 0.2
AL139220.2-212ENST00000616338 ADRA2BP18089 450 aa16.3■□□□□ 0.2
AL139220.2-212ENST00000616338 WIZO95785 1651 aa16.2■□□□□ 0.18
AL139220.2-212ENST00000616338 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
AL139220.2-212ENST00000616338 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
AL139220.2-212ENST00000616338 NESP48681 1621 aa16.05■□□□□ 0.16
AL139220.2-212ENST00000616338 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
AL139220.2-212ENST00000616338 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
AL139220.2-212ENST00000616338 ERCC6Q03468 1493 aa15.98■□□□□ 0.15
AL139220.2-212ENST00000616338 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
AL139220.2-212ENST00000616338 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
AL139220.2-212ENST00000616338 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
AL139220.2-212ENST00000616338 CFTRP13569 1480 aa15.93■□□□□ 0.14
AL139220.2-212ENST00000616338 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
AL139220.2-212ENST00000616338 CUX2O14529 1486 aa15.79■□□□□ 0.12
AL139220.2-212ENST00000616338 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
AL139220.2-212ENST00000616338 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
AL139220.2-212ENST00000616338 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
AL139220.2-212ENST00000616338 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
AL139220.2-212ENST00000616338 WDR62O43379 1518 aa15.63■□□□□ 0.09
AL139220.2-212ENST00000616338 MSH5O43196 834 aa15.62■□□□□ 0.09
AL139220.2-212ENST00000616338 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
AL139220.2-212ENST00000616338 ABCC8Q09428 1581 aa15.59■□□□□ 0.09
AL139220.2-212ENST00000616338 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
AL139220.2-212ENST00000616338 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
AL139220.2-212ENST00000616338 DNAJC5Q9H3Z4 198 aa15.47■□□□□ 0.07
AL139220.2-212ENST00000616338 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
AL139220.2-212ENST00000616338 DNMBPQ6XZF7 1577 aa15.46■□□□□ 0.07
AL139220.2-212ENST00000616338 SOGA1O94964 1423 aa15.45■□□□□ 0.06
AL139220.2-212ENST00000616338 CUX1P39880 1505 aa15.41■□□□□ 0.06
AL139220.2-212ENST00000616338 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
AL139220.2-212ENST00000616338 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
AL139220.2-212ENST00000616338 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
AL139220.2-212ENST00000616338 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
AL139220.2-212ENST00000616338 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
AL139220.2-212ENST00000616338 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
AL139220.2-212ENST00000616338 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
AL139220.2-212ENST00000616338 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
AL139220.2-212ENST00000616338 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
AL139220.2-212ENST00000616338 FBLN2P98095 1184 aa15.26■□□□□ 0.03
AL139220.2-212ENST00000616338 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
AL139220.2-212ENST00000616338 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
AL139220.2-212ENST00000616338 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
AL139220.2-212ENST00000616338 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
AL139220.2-212ENST00000616338 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
AL139220.2-212ENST00000616338 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
AL139220.2-212ENST00000616338 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
AL139220.2-212ENST00000616338 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
AL139220.2-212ENST00000616338 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
AL139220.2-212ENST00000616338 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
AL139220.2-212ENST00000616338 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
AL139220.2-212ENST00000616338 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
AL139220.2-212ENST00000616338 IGF1RP08069 1367 aa15.11■□□□□ 0.01
AL139220.2-212ENST00000616338 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
AL139220.2-212ENST00000616338 SYNJ2O15056 1496 aa15.08■□□□□ 0.01
AL139220.2-212ENST00000616338 FHAD1B1AJZ9 1412 aa15.05■□□□□ -0
AL139220.2-212ENST00000616338 ABCA5Q8WWZ7 1642 aa15.05■□□□□ -0
AL139220.2-212ENST00000616338 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
AL139220.2-212ENST00000616338 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
AL139220.2-212ENST00000616338 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
AL139220.2-212ENST00000616338 GRIN2AQ12879 1464 aa14.96□□□□□ -0.01
AL139220.2-212ENST00000616338 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
AL139220.2-212ENST00000616338 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
AL139220.2-212ENST00000616338 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
AL139220.2-212ENST00000616338 JPH4Q96JJ6 628 aa14.94□□□□□ -0.02
AL139220.2-212ENST00000616338 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms