RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 NISCHQ9Y2I1 1504 aa19.29■□□□□ 0.68
MSRB3-212ENST00000614640 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
MSRB3-212ENST00000614640 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
MSRB3-212ENST00000614640 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
MSRB3-212ENST00000614640 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
MSRB3-212ENST00000614640 ABCC9O60706 1549 aa15.99■□□□□ 0.15
MSRB3-212ENST00000614640 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
MSRB3-212ENST00000614640 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
MSRB3-212ENST00000614640 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
MSRB3-212ENST00000614640 NACADO15069 1562 aa15.69■□□□□ 0.1
MSRB3-212ENST00000614640 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
MSRB3-212ENST00000614640 SCRIBQ14160 1630 aa15.48■□□□□ 0.07
MSRB3-212ENST00000614640 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
MSRB3-212ENST00000614640 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSRB3-212ENST00000614640 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
MSRB3-212ENST00000614640 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
MSRB3-212ENST00000614640 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
MSRB3-212ENST00000614640 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
MSRB3-212ENST00000614640 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
MSRB3-212ENST00000614640 HRCP23327 699 aa14.9□□□□□ -0.02
MSRB3-212ENST00000614640 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
MSRB3-212ENST00000614640 PCGF6Q9BYE7 350 aa14.89□□□□□ -0.03
MSRB3-212ENST00000614640 WIZO95785 1651 aa14.87□□□□□ -0.03
MSRB3-212ENST00000614640 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
MSRB3-212ENST00000614640 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
MSRB3-212ENST00000614640 SMARCA4P51532 1647 aa14.78□□□□□ -0.04
MSRB3-212ENST00000614640 EIF4G1Q04637 1599 aaKnown RBP14.71□□□□□ -0.05
MSRB3-212ENST00000614640 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
MSRB3-212ENST00000614640 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
MSRB3-212ENST00000614640 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
MSRB3-212ENST00000614640 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
MSRB3-212ENST00000614640 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
MSRB3-212ENST00000614640 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
MSRB3-212ENST00000614640 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
MSRB3-212ENST00000614640 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
MSRB3-212ENST00000614640 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.08
MSRB3-212ENST00000614640 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
MSRB3-212ENST00000614640 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
MSRB3-212ENST00000614640 NCAPD3P42695 1498 aa14.48□□□□□ -0.09
MSRB3-212ENST00000614640 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
MSRB3-212ENST00000614640 SOGA1O94964 1423 aa14.33□□□□□ -0.12
MSRB3-212ENST00000614640 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.12
MSRB3-212ENST00000614640 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
MSRB3-212ENST00000614640 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
MSRB3-212ENST00000614640 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
MSRB3-212ENST00000614640 EEA1Q15075 1411 aa14.23□□□□□ -0.13
MSRB3-212ENST00000614640 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
MSRB3-212ENST00000614640 SYNJ1O43426 1573 aa14.21□□□□□ -0.13
MSRB3-212ENST00000614640 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.13
MSRB3-212ENST00000614640 TNIKQ9UKE5 1360 aa14.21□□□□□ -0.13
MSRB3-212ENST00000614640 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
MSRB3-212ENST00000614640 CFTRP13569 1480 aa14.16□□□□□ -0.14
MSRB3-212ENST00000614640 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
MSRB3-212ENST00000614640 KIF21BO75037 1637 aa14.09□□□□□ -0.15
MSRB3-212ENST00000614640 UBTFP17480 764 aaKnown RBP14.08□□□□□ -0.15
MSRB3-212ENST00000614640 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
MSRB3-212ENST00000614640 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
MSRB3-212ENST00000614640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
MSRB3-212ENST00000614640 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
MSRB3-212ENST00000614640 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.16
MSRB3-212ENST00000614640 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.16
MSRB3-212ENST00000614640 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
MSRB3-212ENST00000614640 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
MSRB3-212ENST00000614640 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
MSRB3-212ENST00000614640 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
MSRB3-212ENST00000614640 KIF27Q86VH2 1401 aa13.96□□□□□ -0.18
MSRB3-212ENST00000614640 CLIP1P30622 1438 aa13.95□□□□□ -0.18
MSRB3-212ENST00000614640 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
MSRB3-212ENST00000614640 NESP48681 1621 aa13.93□□□□□ -0.18
MSRB3-212ENST00000614640 CUX1P39880 1505 aa13.91□□□□□ -0.18
MSRB3-212ENST00000614640 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
MSRB3-212ENST00000614640 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
MSRB3-212ENST00000614640 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
MSRB3-212ENST00000614640 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
MSRB3-212ENST00000614640 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
MSRB3-212ENST00000614640 CUX2O14529 1486 aa13.86□□□□□ -0.19
MSRB3-212ENST00000614640 APLP2Q06481 763 aa13.85□□□□□ -0.19
MSRB3-212ENST00000614640 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
MSRB3-212ENST00000614640 RANGAP1P46060 587 aaPredicted RBP13.84□□□□□ -0.19
MSRB3-212ENST00000614640 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
MSRB3-212ENST00000614640 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
MSRB3-212ENST00000614640 ARAP1Q96P48 1450 aa13.8□□□□□ -0.2
MSRB3-212ENST00000614640 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
MSRB3-212ENST00000614640 CARMIL1Q5VZK9 1371 aa13.74□□□□□ -0.21
MSRB3-212ENST00000614640 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
MSRB3-212ENST00000614640 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
MSRB3-212ENST00000614640 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
MSRB3-212ENST00000614640 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
MSRB3-212ENST00000614640 IGF1RP08069 1367 aa13.71□□□□□ -0.22
MSRB3-212ENST00000614640 DIEXFQ68CQ4 756 aaKnown RBP13.7□□□□□ -0.22
MSRB3-212ENST00000614640 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
MSRB3-212ENST00000614640 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
MSRB3-212ENST00000614640 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
MSRB3-212ENST00000614640 ARHGAP35Q9NRY4 1499 aa13.68□□□□□ -0.22
MSRB3-212ENST00000614640 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-212ENST00000614640 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
MSRB3-212ENST00000614640 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.23
MSRB3-212ENST00000614640 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
MSRB3-212ENST00000614640 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
MSRB3-212ENST00000614640 RRBP1Q9P2E9 1410 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms