RNA–Protein interactions for RNA: ENST00000613930.4

SLC6A6-205, Transcript of solute carrier family 6 member 6, humanhuman

TSL 2

Gene SLC6A6, Length 988 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-205ENST00000613930 NISCHQ9Y2I1 1504 aa46.67■■■■■ 5.06
SLC6A6-205ENST00000613930 CCDC180Q9P1Z9 1646 aa41.26■■■■■ 4.2
SLC6A6-205ENST00000613930 ABCC9O60706 1549 aa40.09■■■■■ 4.01
SLC6A6-205ENST00000613930 ZCCHC6Q5VYS8 1495 aaKnown RBP38.96■■■■□ 3.83
SLC6A6-205ENST00000613930 DCAF8L2P0C7V8 631 aa38.94■■■■□ 3.82
SLC6A6-205ENST00000613930 NACADO15069 1562 aa38.7■■■■□ 3.79
SLC6A6-205ENST00000613930 RB1CC1Q8TDY2 1594 aa38.66■■■■□ 3.78
SLC6A6-205ENST00000613930 DCAF1Q9Y4B6 1507 aa38.56■■■■□ 3.76
SLC6A6-205ENST00000613930 MYO15BQ96JP2 1530 aa38.54■■■■□ 3.76
SLC6A6-205ENST00000613930 UNC13AQ9UPW8 1703 aa37.86■■■■□ 3.65
SLC6A6-205ENST00000613930 SCRIBQ14160 1630 aa37.79■■■■□ 3.64
SLC6A6-205ENST00000613930 PABPN1Q86U42 306 aaKnown RBP eCLIP37.56■■■■□ 3.6
SLC6A6-205ENST00000613930 BICRAQ9NZM4 1560 aa37.51■■■■□ 3.6
SLC6A6-205ENST00000613930 SHROOM4Q9ULL8 1493 aa37.25■■■■□ 3.55
SLC6A6-205ENST00000613930 EIF4G1Q04637 1599 aaKnown RBP36.48■■■■□ 3.43
SLC6A6-205ENST00000613930 DNAJC5BQ9UF47 199 aa36.44■■■■□ 3.42
SLC6A6-205ENST00000613930 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
SLC6A6-205ENST00000613930 CC2D2AQ9P2K1 1620 aa36.25■■■■□ 3.39
SLC6A6-205ENST00000613930 SMARCA4P51532 1647 aa36.13■■■■□ 3.37
SLC6A6-205ENST00000613930 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
SLC6A6-205ENST00000613930 MROH2BQ7Z745 1585 aa36.02■■■■□ 3.36
SLC6A6-205ENST00000613930 ATAD2BQ9ULI0 1458 aa35.83■■■■□ 3.33
SLC6A6-205ENST00000613930 SMARCA2P51531 1590 aa35.77■■■■□ 3.32
SLC6A6-205ENST00000613930 RSF1Q96T23 1441 aaPredicted RBP35.73■■■■□ 3.31
SLC6A6-205ENST00000613930 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
SLC6A6-205ENST00000613930 NCAPD3P42695 1498 aa35.71■■■■□ 3.31
SLC6A6-205ENST00000613930 WIZO95785 1651 aa35.68■■■■□ 3.3
SLC6A6-205ENST00000613930 HMGXB3Q12766 1538 aa35.57■■■■□ 3.28
SLC6A6-205ENST00000613930 BAZ1BQ9UIG0 1483 aaKnown RBP35.56■■■■□ 3.28
SLC6A6-205ENST00000613930 TOP2AP11388 1531 aaKnown RBP35.26■■■■□ 3.23
SLC6A6-205ENST00000613930 SUPT5HO00267 1087 aaKnown RBP35.24■■■■□ 3.23
SLC6A6-205ENST00000613930 CCDC88BA6NC98 1476 aa34.87■■■■□ 3.17
SLC6A6-205ENST00000613930 NESP48681 1621 aa34.82■■■■□ 3.16
SLC6A6-205ENST00000613930 CADPSQ9ULU8 1353 aa34.72■■■■□ 3.15
SLC6A6-205ENST00000613930 LAMC3Q9Y6N6 1575 aa34.7■■■■□ 3.15
SLC6A6-205ENST00000613930 CFTRP13569 1480 aa34.58■■■■□ 3.13
SLC6A6-205ENST00000613930 ERCC6Q03468 1493 aa34.49■■■■□ 3.11
SLC6A6-205ENST00000613930 PDS5BQ9NTI5 1447 aa34.47■■■■□ 3.11
SLC6A6-205ENST00000613930 KIF21AQ7Z4S6 1674 aa34.41■■■■□ 3.1
SLC6A6-205ENST00000613930 PRDM2Q13029 1718 aa34.38■■■■□ 3.09
SLC6A6-205ENST00000613930 FANCD2Q9BXW9 1451 aa34.33■■■■□ 3.09
SLC6A6-205ENST00000613930 CEP164Q9UPV0 1460 aa34.25■■■■□ 3.07
SLC6A6-205ENST00000613930 THOC2Q8NI27 1593 aaKnown RBP34.15■■■■□ 3.06
SLC6A6-205ENST00000613930 MRC2Q9UBG0 1479 aa34.11■■■■□ 3.05
SLC6A6-205ENST00000613930 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
SLC6A6-205ENST00000613930 WDR62O43379 1518 aa33.97■■■■□ 3.03
SLC6A6-205ENST00000613930 CUX2O14529 1486 aa33.91■■■■□ 3.02
SLC6A6-205ENST00000613930 TOPBP1Q92547 1522 aa33.84■■■■□ 3.01
SLC6A6-205ENST00000613930 DNMBPQ6XZF7 1577 aa33.82■■■■□ 3
SLC6A6-205ENST00000613930 ABCC8Q09428 1581 aa33.79■■■■□ 3
SLC6A6-205ENST00000613930 CUX1P39880 1505 aa33.75■■■□□ 2.99
SLC6A6-205ENST00000613930 WRNQ14191 1432 aaPredicted RBP eCLIP33.68■■■□□ 2.98
SLC6A6-205ENST00000613930 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
SLC6A6-205ENST00000613930 POLA1P09884 1462 aaPredicted RBP33.57■■■□□ 2.97
SLC6A6-205ENST00000613930 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.97
SLC6A6-205ENST00000613930 TOP2BQ02880 1626 aa33.55■■■□□ 2.96
SLC6A6-205ENST00000613930 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
SLC6A6-205ENST00000613930 IFT140Q96RY7 1462 aa33.49■■■□□ 2.95
SLC6A6-205ENST00000613930 RAD54L2Q9Y4B4 1467 aa33.47■■■□□ 2.95
SLC6A6-205ENST00000613930 SOGA1O94964 1423 aa33.46■■■□□ 2.95
SLC6A6-205ENST00000613930 TARBP1Q13395 1621 aaKnown RBP33.43■■■□□ 2.94
SLC6A6-205ENST00000613930 ZNF608Q9ULD9 1512 aaPredicted RBP33.37■■■□□ 2.93
SLC6A6-205ENST00000613930 DNAJC5Q9H3Z4 198 aa33.33■■■□□ 2.93
SLC6A6-205ENST00000613930 WDR97A6NE52 1622 aa33.26■■■□□ 2.91
SLC6A6-205ENST00000613930 TDRD9Q8NDG6 1382 aaKnown RBP33.24■■■□□ 2.91
SLC6A6-205ENST00000613930 AQRO60306 1485 aaKnown RBP eCLIP33.24■■■□□ 2.912e-8■■■■■ 31.7
SLC6A6-205ENST00000613930 EIF4G3O43432 1585 aaKnown RBP33.23■■■□□ 2.91
SLC6A6-205ENST00000613930 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
SLC6A6-205ENST00000613930 TRIM41Q8WV44 630 aa33.2■■■□□ 2.91
SLC6A6-205ENST00000613930 CHIC1Q5VXU3 224 aa33.08■■■□□ 2.89
SLC6A6-205ENST00000613930 ABCA5Q8WWZ7 1642 aa33.08■■■□□ 2.89
SLC6A6-205ENST00000613930 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
SLC6A6-205ENST00000613930 PBRM1Q86U86 1689 aa33■■■□□ 2.87
SLC6A6-205ENST00000613930 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
SLC6A6-205ENST00000613930 KIF27Q86VH2 1401 aa32.93■■■□□ 2.86
SLC6A6-205ENST00000613930 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
SLC6A6-205ENST00000613930 RUSC2Q8N2Y8 1516 aa32.85■■■□□ 2.85
SLC6A6-205ENST00000613930 MAGI1Q96QZ7 1491 aaPredicted RBP32.84■■■□□ 2.85
SLC6A6-205ENST00000613930 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.85
SLC6A6-205ENST00000613930 FBLN2P98095 1184 aa32.78■■■□□ 2.84
SLC6A6-205ENST00000613930 IGF1RP08069 1367 aa32.76■■■□□ 2.83
SLC6A6-205ENST00000613930 CHD1O14646 1710 aa32.76■■■□□ 2.83
SLC6A6-205ENST00000613930 ADAMTS12P58397 1594 aa32.74■■■□□ 2.83
SLC6A6-205ENST00000613930 SYNJ2O15056 1496 aa32.73■■■□□ 2.83
SLC6A6-205ENST00000613930 CHMP7Q8WUX9 453 aaPredicted RBP32.71■■■□□ 2.83
SLC6A6-205ENST00000613930 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
SLC6A6-205ENST00000613930 OSCARQ8IYS5 282 aa32.62■■■□□ 2.81
SLC6A6-205ENST00000613930 CUL7Q14999 1698 aa32.62■■■□□ 2.81
SLC6A6-205ENST00000613930 FAM9AQ8IZU1 332 aaPredicted RBP32.59■■■□□ 2.81
SLC6A6-205ENST00000613930 CARMIL1Q5VZK9 1371 aa32.58■■■□□ 2.81
SLC6A6-205ENST00000613930 GRIN2AQ12879 1464 aa32.57■■■□□ 2.8
SLC6A6-205ENST00000613930 EEA1Q15075 1411 aa32.53■■■□□ 2.8
SLC6A6-205ENST00000613930 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
SLC6A6-205ENST00000613930 CEP170Q5SW79 1584 aa32.43■■■□□ 2.78
SLC6A6-205ENST00000613930 RAPGEF2Q9Y4G8 1499 aa32.42■■■□□ 2.78
SLC6A6-205ENST00000613930 NUP160Q12769 1436 aa32.4■■■□□ 2.78
SLC6A6-205ENST00000613930 PRXQ9BXM0 1461 aa32.4■■■□□ 2.78
SLC6A6-205ENST00000613930 CLASP1Q7Z460 1538 aa32.36■■■□□ 2.77
SLC6A6-205ENST00000613930 KIF21BO75037 1637 aa32.2■■■□□ 2.75
SLC6A6-205ENST00000613930 EHMT2Q96KQ7 1210 aa32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms