RNA–Protein interactions for RNA: ENST00000613723.4

TMC4-207, Transcript of transmembrane channel like 4, humanhuman

TSL 1 (best)

Gene TMC4, Length 1,560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-207ENST00000613723 NISCHQ9Y2I1 1504 aa48.87■■■■■ 5.41
TMC4-207ENST00000613723 CCDC180Q9P1Z9 1646 aa43.33■■■■■ 4.53
TMC4-207ENST00000613723 ABCC9O60706 1549 aa42.03■■■■■ 4.32
TMC4-207ENST00000613723 ZCCHC6Q5VYS8 1495 aaKnown RBP40.78■■■■■ 4.12
TMC4-207ENST00000613723 DCAF8L2P0C7V8 631 aa40.76■■■■■ 4.12
TMC4-207ENST00000613723 NACADO15069 1562 aa40.62■■■■■ 4.09
TMC4-207ENST00000613723 RB1CC1Q8TDY2 1594 aa40.6■■■■■ 4.09
TMC4-207ENST00000613723 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
TMC4-207ENST00000613723 DCAF1Q9Y4B6 1507 aa40.43■■■■■ 4.06
TMC4-207ENST00000613723 UNC13AQ9UPW8 1703 aa39.78■■■■□ 3.96
TMC4-207ENST00000613723 SCRIBQ14160 1630 aa39.59■■■■□ 3.93
TMC4-207ENST00000613723 BICRAQ9NZM4 1560 aa39.33■■■■□ 3.89
TMC4-207ENST00000613723 PABPN1Q86U42 306 aaKnown RBP eCLIP39.33■■■■□ 3.89
TMC4-207ENST00000613723 SHROOM4Q9ULL8 1493 aa38.91■■■■□ 3.82
TMC4-207ENST00000613723 EIF4G1Q04637 1599 aaKnown RBP38.28■■■■□ 3.72
TMC4-207ENST00000613723 DNAJC5BQ9UF47 199 aa38.19■■■■□ 3.7
TMC4-207ENST00000613723 CC2D2AQ9P2K1 1620 aa38.05■■■■□ 3.68
TMC4-207ENST00000613723 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
TMC4-207ENST00000613723 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
TMC4-207ENST00000613723 BAZ1AQ9NRL2 1556 aaPredicted RBP37.88■■■■□ 3.65
TMC4-207ENST00000613723 MROH2BQ7Z745 1585 aa37.68■■■■□ 3.62
TMC4-207ENST00000613723 SMARCA2P51531 1590 aa37.54■■■■□ 3.6
TMC4-207ENST00000613723 ATAD2BQ9ULI0 1458 aa37.53■■■■□ 3.6
TMC4-207ENST00000613723 PEG3Q9GZU2 1588 aa37.47■■■■□ 3.59
TMC4-207ENST00000613723 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
TMC4-207ENST00000613723 RSF1Q96T23 1441 aaPredicted RBP37.36■■■■□ 3.57
TMC4-207ENST00000613723 WIZO95785 1651 aa37.35■■■■□ 3.57
TMC4-207ENST00000613723 HMGXB3Q12766 1538 aa37.32■■■■□ 3.56
TMC4-207ENST00000613723 BAZ1BQ9UIG0 1483 aaKnown RBP37.28■■■■□ 3.56
TMC4-207ENST00000613723 TOP2AP11388 1531 aaKnown RBP36.93■■■■□ 3.5
TMC4-207ENST00000613723 SUPT5HO00267 1087 aaKnown RBP36.77■■■■□ 3.48
TMC4-207ENST00000613723 CCDC88BA6NC98 1476 aa36.48■■■■□ 3.43
TMC4-207ENST00000613723 NESP48681 1621 aa36.48■■■■□ 3.43
TMC4-207ENST00000613723 LAMC3Q9Y6N6 1575 aa36.44■■■■□ 3.42
TMC4-207ENST00000613723 CADPSQ9ULU8 1353 aa36.38■■■■□ 3.42
TMC4-207ENST00000613723 CFTRP13569 1480 aa36.25■■■■□ 3.39
TMC4-207ENST00000613723 ERCC6Q03468 1493 aa36.21■■■■□ 3.39
TMC4-207ENST00000613723 PDS5BQ9NTI5 1447 aa36.16■■■■□ 3.38
TMC4-207ENST00000613723 PRDM2Q13029 1718 aa36.14■■■■□ 3.38
TMC4-207ENST00000613723 KIF21AQ7Z4S6 1674 aa36.13■■■■□ 3.38
TMC4-207ENST00000613723 FANCD2Q9BXW9 1451 aa35.99■■■■□ 3.35
TMC4-207ENST00000613723 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
TMC4-207ENST00000613723 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
TMC4-207ENST00000613723 MRC2Q9UBG0 1479 aa35.77■■■■□ 3.32
TMC4-207ENST00000613723 WDR62O43379 1518 aa35.65■■■■□ 3.3
TMC4-207ENST00000613723 CUX2O14529 1486 aa35.65■■■■□ 3.3
TMC4-207ENST00000613723 URB2Q14146 1524 aaKnown RBP35.59■■■■□ 3.29
TMC4-207ENST00000613723 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
TMC4-207ENST00000613723 DNMBPQ6XZF7 1577 aa35.46■■■■□ 3.27
TMC4-207ENST00000613723 TOPBP1Q92547 1522 aa35.46■■■■□ 3.27
TMC4-207ENST00000613723 CUX1P39880 1505 aa35.33■■■■□ 3.25
TMC4-207ENST00000613723 WRNQ14191 1432 aaPredicted RBP eCLIP35.25■■■■□ 3.23
TMC4-207ENST00000613723 POLA1P09884 1462 aaPredicted RBP35.18■■■■□ 3.22
TMC4-207ENST00000613723 SYNJ1O43426 1573 aa35.16■■■■□ 3.22
TMC4-207ENST00000613723 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
TMC4-207ENST00000613723 TOP2BQ02880 1626 aa35.15■■■■□ 3.22
TMC4-207ENST00000613723 BIVM-ERCC5R4GMW8 1640 aa35.15■■■■□ 3.22
TMC4-207ENST00000613723 IFT140Q96RY7 1462 aa35.12■■■■□ 3.21
TMC4-207ENST00000613723 TARBP1Q13395 1621 aaKnown RBP35.05■■■■□ 3.2
TMC4-207ENST00000613723 SOGA1O94964 1423 aa35.03■■■■□ 3.2
TMC4-207ENST00000613723 RAD54L2Q9Y4B4 1467 aa35.03■■■■□ 3.2
TMC4-207ENST00000613723 ZNF608Q9ULD9 1512 aaPredicted RBP34.95■■■■□ 3.19
TMC4-207ENST00000613723 WDR97A6NE52 1622 aa34.89■■■■□ 3.18
TMC4-207ENST00000613723 EIF4G3O43432 1585 aaKnown RBP34.88■■■■□ 3.17
TMC4-207ENST00000613723 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.16
TMC4-207ENST00000613723 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.16
TMC4-207ENST00000613723 TDRD9Q8NDG6 1382 aaKnown RBP34.8■■■■□ 3.16
TMC4-207ENST00000613723 TRIM41Q8WV44 630 aa34.7■■■■□ 3.14
TMC4-207ENST00000613723 ABCA5Q8WWZ7 1642 aa34.68■■■■□ 3.14
TMC4-207ENST00000613723 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
TMC4-207ENST00000613723 PBRM1Q86U86 1689 aa34.64■■■■□ 3.14
TMC4-207ENST00000613723 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
TMC4-207ENST00000613723 SNAPC4Q5SXM2 1469 aa34.5■■■■□ 3.11
TMC4-207ENST00000613723 CHIC1Q5VXU3 224 aa34.48■■■■□ 3.11
TMC4-207ENST00000613723 KIF27Q86VH2 1401 aa34.48■■■■□ 3.11
TMC4-207ENST00000613723 MAGI1Q96QZ7 1491 aaPredicted RBP34.46■■■■□ 3.11
TMC4-207ENST00000613723 ERICH3Q5RHP9 1530 aa34.42■■■■□ 3.1
TMC4-207ENST00000613723 CHD1O14646 1710 aa34.41■■■■□ 3.1
TMC4-207ENST00000613723 FBLN2P98095 1184 aa34.36■■■■□ 3.09
TMC4-207ENST00000613723 SYNJ2O15056 1496 aa34.32■■■■□ 3.09
TMC4-207ENST00000613723 ADAMTS12P58397 1594 aa34.32■■■■□ 3.08
TMC4-207ENST00000613723 CHMP7Q8WUX9 453 aaPredicted RBP34.29■■■■□ 3.08
TMC4-207ENST00000613723 RUSC2Q8N2Y8 1516 aa34.29■■■■□ 3.08
TMC4-207ENST00000613723 IGF1RP08069 1367 aa34.25■■■■□ 3.07
TMC4-207ENST00000613723 OSCARQ8IYS5 282 aa34.25■■■■□ 3.07
TMC4-207ENST00000613723 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
TMC4-207ENST00000613723 CUL7Q14999 1698 aa34.22■■■■□ 3.07
TMC4-207ENST00000613723 GRIN2AQ12879 1464 aa34.15■■■■□ 3.06
TMC4-207ENST00000613723 DNAJC5Q9H3Z4 198 aa34.1■■■■□ 3.05
TMC4-207ENST00000613723 CARMIL1Q5VZK9 1371 aa34.09■■■■□ 3.05
TMC4-207ENST00000613723 EEA1Q15075 1411 aa34.05■■■■□ 3.04
TMC4-207ENST00000613723 FAM9AQ8IZU1 332 aaPredicted RBP33.99■■■■□ 3.03
TMC4-207ENST00000613723 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
TMC4-207ENST00000613723 CSRNP3Q8WYN3 585 aa33.96■■■■□ 3.03
TMC4-207ENST00000613723 CLASP1Q7Z460 1538 aa33.95■■■■□ 3.03
TMC4-207ENST00000613723 NUP160Q12769 1436 aa33.95■■■■□ 3.03
TMC4-207ENST00000613723 RAPGEF2Q9Y4G8 1499 aa33.94■■■■□ 3.02
TMC4-207ENST00000613723 PRXQ9BXM0 1461 aa33.88■■■■□ 3.01
TMC4-207ENST00000613723 KIAA0586Q9BVV6 1533 aa33.73■■■□□ 2.99
TMC4-207ENST00000613723 ARHGEF11O15085 1522 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms