RNA–Protein interactions for RNA: ENST00000613346.4

PCDH15-225, Transcript of protocadherin related 15, humanhuman

TSL 4

Gene PCDH15, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-225ENST00000613346 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
PCDH15-225ENST00000613346 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
PCDH15-225ENST00000613346 ABCC9O60706 1549 aa27.65■■■□□ 2.02
PCDH15-225ENST00000613346 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
PCDH15-225ENST00000613346 ZCCHC6Q5VYS8 1495 aaKnown RBP26.79■■□□□ 1.88
PCDH15-225ENST00000613346 NACADO15069 1562 aa26.72■■□□□ 1.87
PCDH15-225ENST00000613346 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
PCDH15-225ENST00000613346 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
PCDH15-225ENST00000613346 DCAF1Q9Y4B6 1507 aa26.57■■□□□ 1.84
PCDH15-225ENST00000613346 SCRIBQ14160 1630 aa26■■□□□ 1.75
PCDH15-225ENST00000613346 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
PCDH15-225ENST00000613346 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
PCDH15-225ENST00000613346 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
PCDH15-225ENST00000613346 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
PCDH15-225ENST00000613346 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.61
PCDH15-225ENST00000613346 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
PCDH15-225ENST00000613346 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
PCDH15-225ENST00000613346 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
PCDH15-225ENST00000613346 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
PCDH15-225ENST00000613346 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
PCDH15-225ENST00000613346 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
PCDH15-225ENST00000613346 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
PCDH15-225ENST00000613346 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
PCDH15-225ENST00000613346 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
PCDH15-225ENST00000613346 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
PCDH15-225ENST00000613346 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
PCDH15-225ENST00000613346 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
PCDH15-225ENST00000613346 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
PCDH15-225ENST00000613346 WIZO95785 1651 aa24.47■■□□□ 1.51
PCDH15-225ENST00000613346 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
PCDH15-225ENST00000613346 TOP2AP11388 1531 aaKnown RBP24.28■■□□□ 1.48
PCDH15-225ENST00000613346 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
PCDH15-225ENST00000613346 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
PCDH15-225ENST00000613346 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
PCDH15-225ENST00000613346 NESP48681 1621 aa23.93■■□□□ 1.42
PCDH15-225ENST00000613346 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
PCDH15-225ENST00000613346 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
PCDH15-225ENST00000613346 CFTRP13569 1480 aa23.84■■□□□ 1.41
PCDH15-225ENST00000613346 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
PCDH15-225ENST00000613346 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
PCDH15-225ENST00000613346 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
PCDH15-225ENST00000613346 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
PCDH15-225ENST00000613346 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
PCDH15-225ENST00000613346 CUX2O14529 1486 aa23.48■■□□□ 1.35
PCDH15-225ENST00000613346 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
PCDH15-225ENST00000613346 ABCC8Q09428 1581 aa23.42■■□□□ 1.34
PCDH15-225ENST00000613346 WDR62O43379 1518 aa23.41■■□□□ 1.34
PCDH15-225ENST00000613346 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
PCDH15-225ENST00000613346 TOPBP1Q92547 1522 aa23.32■■□□□ 1.32
PCDH15-225ENST00000613346 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
PCDH15-225ENST00000613346 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
PCDH15-225ENST00000613346 CUX1P39880 1505 aa23.19■■□□□ 1.3
PCDH15-225ENST00000613346 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
PCDH15-225ENST00000613346 DNAJC5Q9H3Z4 198 aa23.16■■□□□ 1.3
PCDH15-225ENST00000613346 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
PCDH15-225ENST00000613346 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
PCDH15-225ENST00000613346 SOGA1O94964 1423 aa23.12■■□□□ 1.29
PCDH15-225ENST00000613346 TOP2BQ02880 1626 aa23.08■■□□□ 1.29
PCDH15-225ENST00000613346 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
PCDH15-225ENST00000613346 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
PCDH15-225ENST00000613346 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
PCDH15-225ENST00000613346 TRIM41Q8WV44 630 aa22.98■■□□□ 1.27
PCDH15-225ENST00000613346 TARBP1Q13395 1621 aaKnown RBP22.97■■□□□ 1.27
PCDH15-225ENST00000613346 ZNF608Q9ULD9 1512 aaPredicted RBP22.95■■□□□ 1.26
PCDH15-225ENST00000613346 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
PCDH15-225ENST00000613346 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
PCDH15-225ENST00000613346 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.26
PCDH15-225ENST00000613346 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
PCDH15-225ENST00000613346 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
PCDH15-225ENST00000613346 GAPVD1Q14C86 1478 aa22.83■■□□□ 1.25
PCDH15-225ENST00000613346 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
PCDH15-225ENST00000613346 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
PCDH15-225ENST00000613346 FBLN2P98095 1184 aa22.75■■□□□ 1.23
PCDH15-225ENST00000613346 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
PCDH15-225ENST00000613346 ABCA5Q8WWZ7 1642 aa22.74■■□□□ 1.23
PCDH15-225ENST00000613346 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
PCDH15-225ENST00000613346 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
PCDH15-225ENST00000613346 MAGI1Q96QZ7 1491 aaPredicted RBP22.7■■□□□ 1.22
PCDH15-225ENST00000613346 PBRM1Q86U86 1689 aa22.68■■□□□ 1.22
PCDH15-225ENST00000613346 ERICH3Q5RHP9 1530 aa22.66■■□□□ 1.22
PCDH15-225ENST00000613346 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
PCDH15-225ENST00000613346 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
PCDH15-225ENST00000613346 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
PCDH15-225ENST00000613346 IGF1RP08069 1367 aa22.57■■□□□ 1.2
PCDH15-225ENST00000613346 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
PCDH15-225ENST00000613346 CHD1O14646 1710 aa22.52■■□□□ 1.2
PCDH15-225ENST00000613346 EEA1Q15075 1411 aa22.51■■□□□ 1.19
PCDH15-225ENST00000613346 CARMIL1Q5VZK9 1371 aa22.5■■□□□ 1.19
PCDH15-225ENST00000613346 CUL7Q14999 1698 aa22.5■■□□□ 1.19
PCDH15-225ENST00000613346 RUSC2Q8N2Y8 1516 aa22.5■■□□□ 1.19
PCDH15-225ENST00000613346 FAM9AQ8IZU1 332 aaPredicted RBP22.48■■□□□ 1.19
PCDH15-225ENST00000613346 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
PCDH15-225ENST00000613346 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
PCDH15-225ENST00000613346 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
PCDH15-225ENST00000613346 NUP160Q12769 1436 aa22.33■■□□□ 1.17
PCDH15-225ENST00000613346 PRXQ9BXM0 1461 aa22.29■■□□□ 1.16
PCDH15-225ENST00000613346 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
PCDH15-225ENST00000613346 CLASP1Q7Z460 1538 aa22.27■■□□□ 1.16
PCDH15-225ENST00000613346 KIAA0586Q9BVV6 1533 aa22.23■■□□□ 1.15
PCDH15-225ENST00000613346 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms