RNA–Protein interactions for RNA: ENST00000612980.4

RDM1-215, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene RDM1, Length 501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-215ENST00000612980 NISCHQ9Y2I1 1504 aa11.95□□□□□ -0.5
RDM1-215ENST00000612980 ABCC9O60706 1549 aa11.86□□□□□ -0.51
RDM1-215ENST00000612980 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
RDM1-215ENST00000612980 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
RDM1-215ENST00000612980 CCDC180Q9P1Z9 1646 aa11.04□□□□□ -0.64
RDM1-215ENST00000612980 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
RDM1-215ENST00000612980 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
RDM1-215ENST00000612980 UNC13AQ9UPW8 1703 aa10.75□□□□□ -0.69
RDM1-215ENST00000612980 CECR2Q9BXF3 1484 aa10.71□□□□□ -0.69
RDM1-215ENST00000612980 BICRAQ9NZM4 1560 aa10.69□□□□□ -0.7
RDM1-215ENST00000612980 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
RDM1-215ENST00000612980 NACADO15069 1562 aa10.57□□□□□ -0.72
RDM1-215ENST00000612980 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
RDM1-215ENST00000612980 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
RDM1-215ENST00000612980 CUX2O14529 1486 aa10.42□□□□□ -0.74
RDM1-215ENST00000612980 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
RDM1-215ENST00000612980 SHROOM4Q9ULL8 1493 aa10.26□□□□□ -0.77
RDM1-215ENST00000612980 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
RDM1-215ENST00000612980 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
RDM1-215ENST00000612980 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
RDM1-215ENST00000612980 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
RDM1-215ENST00000612980 NESP48681 1621 aa10.01□□□□□ -0.81
RDM1-215ENST00000612980 AEBP2Q6ZN18 517 aaPredicted RBP10.01□□□□□ -0.81
RDM1-215ENST00000612980 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
RDM1-215ENST00000612980 BAZ1AQ9NRL2 1556 aaPredicted RBP9.9□□□□□ -0.82
RDM1-215ENST00000612980 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
RDM1-215ENST00000612980 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
RDM1-215ENST00000612980 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
RDM1-215ENST00000612980 ILDR1Q86SU0 546 aaPredicted RBP9.86□□□□□ -0.83
RDM1-215ENST00000612980 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
RDM1-215ENST00000612980 TRHP20396 242 aaPredicted RBP9.79□□□□□ -0.84
RDM1-215ENST00000612980 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
RDM1-215ENST00000612980 OSCARQ8IYS5 282 aa9.77□□□□□ -0.85
RDM1-215ENST00000612980 ZCCHC6Q5VYS8 1495 aaKnown RBP9.77□□□□□ -0.85
RDM1-215ENST00000612980 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
RDM1-215ENST00000612980 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
RDM1-215ENST00000612980 ATAD2BQ9ULI0 1458 aa9.69□□□□□ -0.86
RDM1-215ENST00000612980 LAMC3Q9Y6N6 1575 aa9.69□□□□□ -0.86
RDM1-215ENST00000612980 WDR62O43379 1518 aa9.67□□□□□ -0.86
RDM1-215ENST00000612980 CYB5RLQ6IPT4 315 aa9.67□□□□□ -0.86
RDM1-215ENST00000612980 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
RDM1-215ENST00000612980 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
RDM1-215ENST00000612980 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
RDM1-215ENST00000612980 PDS5BQ9NTI5 1447 aa9.6□□□□□ -0.87
RDM1-215ENST00000612980 BAZ1BQ9UIG0 1483 aaKnown RBP9.53□□□□□ -0.88
RDM1-215ENST00000612980 SMARCA4P51532 1647 aa9.52□□□□□ -0.89
RDM1-215ENST00000612980 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
RDM1-215ENST00000612980 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
RDM1-215ENST00000612980 ZNF608Q9ULD9 1512 aaPredicted RBP9.44□□□□□ -0.9
RDM1-215ENST00000612980 CHD1O14646 1710 aa9.43□□□□□ -0.9
RDM1-215ENST00000612980 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
RDM1-215ENST00000612980 FANCD2Q9BXW9 1451 aa9.39□□□□□ -0.91
RDM1-215ENST00000612980 PEG3Q9GZU2 1588 aa9.37□□□□□ -0.91
RDM1-215ENST00000612980 KDM4FA0A1W2PPD8 638 aa9.37□□□□□ -0.91
RDM1-215ENST00000612980 RSF1Q96T23 1441 aaPredicted RBP9.36□□□□□ -0.91
RDM1-215ENST00000612980 EIF4G3O43432 1585 aaKnown RBP9.33□□□□□ -0.92
RDM1-215ENST00000612980 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
RDM1-215ENST00000612980 HECW2Q9P2P5 1572 aa9.28□□□□□ -0.92
RDM1-215ENST00000612980 CLASP1Q7Z460 1538 aa9.26□□□□□ -0.93
RDM1-215ENST00000612980 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
RDM1-215ENST00000612980 IFT140Q96RY7 1462 aa9.26□□□□□ -0.93
RDM1-215ENST00000612980 KIF13AQ9H1H9 1805 aa9.26□□□□□ -0.93
RDM1-215ENST00000612980 ERCC6L2Q5T890 1561 aa9.24□□□□□ -0.93
RDM1-215ENST00000612980 FBLN2P98095 1184 aa9.24□□□□□ -0.93
RDM1-215ENST00000612980 ILDR2Q71H61 639 aa9.24□□□□□ -0.93
RDM1-215ENST00000612980 FBXO41Q8TF61 875 aa9.22□□□□□ -0.93
RDM1-215ENST00000612980 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.931e-6■■■■□ 21.5
RDM1-215ENST00000612980 CFTRP13569 1480 aa9.2□□□□□ -0.94
RDM1-215ENST00000612980 SOCS7O14512 581 aa9.19□□□□□ -0.94
RDM1-215ENST00000612980 GAPVD1Q14C86 1478 aa9.19□□□□□ -0.94
RDM1-215ENST00000612980 TARBP1Q13395 1621 aaKnown RBP9.14□□□□□ -0.95
RDM1-215ENST00000612980 TOPBP1Q92547 1522 aa9.14□□□□□ -0.95
RDM1-215ENST00000612980 WIZO95785 1651 aa9.13□□□□□ -0.95
RDM1-215ENST00000612980 ADGRL1O94910 1474 aa9.13□□□□□ -0.95
RDM1-215ENST00000612980 KDM6BO15054 1643 aa9.12□□□□□ -0.95
RDM1-215ENST00000612980 SYNJ1O43426 1573 aa9.12□□□□□ -0.95
RDM1-215ENST00000612980 SYNJ2O15056 1496 aa9.11□□□□□ -0.95
RDM1-215ENST00000612980 SNAPC4Q5SXM2 1469 aa9.1□□□□□ -0.95
RDM1-215ENST00000612980 PRDM2Q13029 1718 aa9.09□□□□□ -0.95
RDM1-215ENST00000612980 DISP3Q9P2K9 1392 aa9.07□□□□□ -0.96
RDM1-215ENST00000612980 TSPOAP1O95153 1857 aa9.03□□□□□ -0.96
RDM1-215ENST00000612980 DIP2BQ9P265 1576 aa9.03□□□□□ -0.96
RDM1-215ENST00000612980 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.96
RDM1-215ENST00000612980 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.97
RDM1-215ENST00000612980 DNMBPQ6XZF7 1577 aa9.02□□□□□ -0.97
RDM1-215ENST00000612980 POLA1P09884 1462 aaPredicted RBP9.01□□□□□ -0.97
RDM1-215ENST00000612980 FAM69CQ0P6D2 419 aa9□□□□□ -0.97
RDM1-215ENST00000612980 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
RDM1-215ENST00000612980 ABCC10Q5T3U5 1492 aa9□□□□□ -0.97
RDM1-215ENST00000612980 CEP170Q5SW79 1584 aa8.97□□□□□ -0.97
RDM1-215ENST00000612980 SPATA31D1Q6ZQQ2 1576 aa8.97□□□□□ -0.97
RDM1-215ENST00000612980 MAGI1Q96QZ7 1491 aaPredicted RBP8.96□□□□□ -0.97
RDM1-215ENST00000612980 ABCC8Q09428 1581 aa8.92□□□□□ -0.98
RDM1-215ENST00000612980 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
RDM1-215ENST00000612980 MAPKBP1O60336 1514 aa8.9□□□□□ -0.98
RDM1-215ENST00000612980 TOP2AP11388 1531 aaKnown RBP8.9□□□□□ -0.99
RDM1-215ENST00000612980 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
RDM1-215ENST00000612980 PPRC1Q5VV67 1664 aaKnown RBP8.89□□□□□ -0.99
RDM1-215ENST00000612980 SHROOM2Q13796 1616 aa8.89□□□□□ -0.99
RDM1-215ENST00000612980 SOGA1O94964 1423 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms