RNA–Protein interactions for RNA: ENST00000612094.1

PDE4DIP-239, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-239ENST00000612094 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
PDE4DIP-239ENST00000612094 CCDC180Q9P1Z9 1646 aa16.82■□□□□ 0.28
PDE4DIP-239ENST00000612094 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
PDE4DIP-239ENST00000612094 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
PDE4DIP-239ENST00000612094 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
PDE4DIP-239ENST00000612094 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
PDE4DIP-239ENST00000612094 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
PDE4DIP-239ENST00000612094 NACADO15069 1562 aa15.31■□□□□ 0.04
PDE4DIP-239ENST00000612094 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
PDE4DIP-239ENST00000612094 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
PDE4DIP-239ENST00000612094 ABCC9O60706 1549 aa15.19■□□□□ 0.02
PDE4DIP-239ENST00000612094 RB1CC1Q8TDY2 1594 aa15.02■□□□□ -0
PDE4DIP-239ENST00000612094 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
PDE4DIP-239ENST00000612094 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
PDE4DIP-239ENST00000612094 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
PDE4DIP-239ENST00000612094 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
PDE4DIP-239ENST00000612094 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
PDE4DIP-239ENST00000612094 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
PDE4DIP-239ENST00000612094 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
PDE4DIP-239ENST00000612094 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
PDE4DIP-239ENST00000612094 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
PDE4DIP-239ENST00000612094 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
PDE4DIP-239ENST00000612094 WIZO95785 1651 aa14.59□□□□□ -0.07
PDE4DIP-239ENST00000612094 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
PDE4DIP-239ENST00000612094 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
PDE4DIP-239ENST00000612094 SLC24A1O60721 1099 aa14.41□□□□□ -0.1
PDE4DIP-239ENST00000612094 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
PDE4DIP-239ENST00000612094 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
PDE4DIP-239ENST00000612094 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
PDE4DIP-239ENST00000612094 HMGXB3Q12766 1538 aa14.22□□□□□ -0.13
PDE4DIP-239ENST00000612094 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
PDE4DIP-239ENST00000612094 KCNA4P22459 653 aa14.17□□□□□ -0.14
PDE4DIP-239ENST00000612094 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
PDE4DIP-239ENST00000612094 ATAD2BQ9ULI0 1458 aa14.14□□□□□ -0.15
PDE4DIP-239ENST00000612094 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
PDE4DIP-239ENST00000612094 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
PDE4DIP-239ENST00000612094 BIVM-ERCC5R4GMW8 1640 aa14.04□□□□□ -0.16
PDE4DIP-239ENST00000612094 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.18
PDE4DIP-239ENST00000612094 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
PDE4DIP-239ENST00000612094 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
PDE4DIP-239ENST00000612094 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
PDE4DIP-239ENST00000612094 CC2D2AQ9P2K1 1620 aa13.88□□□□□ -0.19
PDE4DIP-239ENST00000612094 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
PDE4DIP-239ENST00000612094 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
PDE4DIP-239ENST00000612094 ADRA2BP18089 450 aa13.8□□□□□ -0.2
PDE4DIP-239ENST00000612094 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDE4DIP-239ENST00000612094 CFTRP13569 1480 aa13.78□□□□□ -0.2
PDE4DIP-239ENST00000612094 WDR97A6NE52 1622 aa13.78□□□□□ -0.2
PDE4DIP-239ENST00000612094 KIF21BO75037 1637 aa13.76□□□□□ -0.21
PDE4DIP-239ENST00000612094 CUX1P39880 1505 aa13.68□□□□□ -0.22
PDE4DIP-239ENST00000612094 EEA1Q15075 1411 aa13.62□□□□□ -0.23
PDE4DIP-239ENST00000612094 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
PDE4DIP-239ENST00000612094 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PDE4DIP-239ENST00000612094 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
PDE4DIP-239ENST00000612094 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
PDE4DIP-239ENST00000612094 KIF21AQ7Z4S6 1674 aa13.55□□□□□ -0.24
PDE4DIP-239ENST00000612094 SOGA1O94964 1423 aa13.53□□□□□ -0.24
PDE4DIP-239ENST00000612094 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
PDE4DIP-239ENST00000612094 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
PDE4DIP-239ENST00000612094 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
PDE4DIP-239ENST00000612094 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.26
PDE4DIP-239ENST00000612094 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
PDE4DIP-239ENST00000612094 TARBP1Q13395 1621 aaKnown RBP13.44□□□□□ -0.26
PDE4DIP-239ENST00000612094 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
PDE4DIP-239ENST00000612094 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
PDE4DIP-239ENST00000612094 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
PDE4DIP-239ENST00000612094 CUL7Q14999 1698 aa13.38□□□□□ -0.27
PDE4DIP-239ENST00000612094 GOLGA3Q08378 1498 aa13.37□□□□□ -0.27
PDE4DIP-239ENST00000612094 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
PDE4DIP-239ENST00000612094 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
PDE4DIP-239ENST00000612094 PBRM1Q86U86 1689 aa13.36□□□□□ -0.27
PDE4DIP-239ENST00000612094 URB2Q14146 1524 aaKnown RBP13.36□□□□□ -0.27
PDE4DIP-239ENST00000612094 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
PDE4DIP-239ENST00000612094 FANCD2Q9BXW9 1451 aa13.35□□□□□ -0.27
PDE4DIP-239ENST00000612094 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
PDE4DIP-239ENST00000612094 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
PDE4DIP-239ENST00000612094 NESP48681 1621 aa13.33□□□□□ -0.28
PDE4DIP-239ENST00000612094 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
PDE4DIP-239ENST00000612094 WDR62O43379 1518 aa13.31□□□□□ -0.28
PDE4DIP-239ENST00000612094 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
PDE4DIP-239ENST00000612094 POLA1P09884 1462 aaPredicted RBP13.28□□□□□ -0.28
PDE4DIP-239ENST00000612094 LRRIQ1Q96JM4 1722 aa13.28□□□□□ -0.28
PDE4DIP-239ENST00000612094 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
PDE4DIP-239ENST00000612094 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
PDE4DIP-239ENST00000612094 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
PDE4DIP-239ENST00000612094 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
PDE4DIP-239ENST00000612094 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
PDE4DIP-239ENST00000612094 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
PDE4DIP-239ENST00000612094 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.3
PDE4DIP-239ENST00000612094 ZBTB22O15209 634 aa13.19□□□□□ -0.3
PDE4DIP-239ENST00000612094 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
PDE4DIP-239ENST00000612094 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
PDE4DIP-239ENST00000612094 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
PDE4DIP-239ENST00000612094 CUX2O14529 1486 aa13.16□□□□□ -0.3
PDE4DIP-239ENST00000612094 IGF1RP08069 1367 aa13.14□□□□□ -0.31
PDE4DIP-239ENST00000612094 ARHGAP35Q9NRY4 1499 aa13.11□□□□□ -0.31
PDE4DIP-239ENST00000612094 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
PDE4DIP-239ENST00000612094 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
PDE4DIP-239ENST00000612094 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
PDE4DIP-239ENST00000612094 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms