RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 NISCHQ9Y2I1 1504 aa28.03■■■□□ 2.08
CBWD1-220ENST00000612045 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
CBWD1-220ENST00000612045 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
CBWD1-220ENST00000612045 ABCC9O60706 1549 aa23.19■■□□□ 1.3
CBWD1-220ENST00000612045 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
CBWD1-220ENST00000612045 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
CBWD1-220ENST00000612045 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
CBWD1-220ENST00000612045 SHROOM4Q9ULL8 1493 aa22.82■■□□□ 1.24
CBWD1-220ENST00000612045 NACADO15069 1562 aa22.8■■□□□ 1.24
CBWD1-220ENST00000612045 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
CBWD1-220ENST00000612045 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
CBWD1-220ENST00000612045 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
CBWD1-220ENST00000612045 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
CBWD1-220ENST00000612045 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
CBWD1-220ENST00000612045 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
CBWD1-220ENST00000612045 AEBP2Q6ZN18 517 aaPredicted RBP21.79■■□□□ 1.08
CBWD1-220ENST00000612045 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
CBWD1-220ENST00000612045 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
CBWD1-220ENST00000612045 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
CBWD1-220ENST00000612045 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.06
CBWD1-220ENST00000612045 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
CBWD1-220ENST00000612045 WIZO95785 1651 aa21.46■■□□□ 1.03
CBWD1-220ENST00000612045 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
CBWD1-220ENST00000612045 EIF4G1Q04637 1599 aaKnown RBP21.29■■□□□ 1
CBWD1-220ENST00000612045 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
CBWD1-220ENST00000612045 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
CBWD1-220ENST00000612045 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
CBWD1-220ENST00000612045 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
CBWD1-220ENST00000612045 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
CBWD1-220ENST00000612045 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
CBWD1-220ENST00000612045 HMGXB3Q12766 1538 aa21.01■□□□□ 0.95
CBWD1-220ENST00000612045 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
CBWD1-220ENST00000612045 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
CBWD1-220ENST00000612045 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
CBWD1-220ENST00000612045 CFTRP13569 1480 aa20.57■□□□□ 0.88
CBWD1-220ENST00000612045 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
CBWD1-220ENST00000612045 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
CBWD1-220ENST00000612045 CADPSQ9ULU8 1353 aa20.51■□□□□ 0.87
CBWD1-220ENST00000612045 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
CBWD1-220ENST00000612045 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
CBWD1-220ENST00000612045 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
CBWD1-220ENST00000612045 NESP48681 1621 aa20.34■□□□□ 0.85
CBWD1-220ENST00000612045 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.85
CBWD1-220ENST00000612045 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
CBWD1-220ENST00000612045 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
CBWD1-220ENST00000612045 BIVM-ERCC5R4GMW8 1640 aa20.25■□□□□ 0.83
CBWD1-220ENST00000612045 FAM9AQ8IZU1 332 aaPredicted RBP20.25■□□□□ 0.83
CBWD1-220ENST00000612045 CUX1P39880 1505 aa20.25■□□□□ 0.83
CBWD1-220ENST00000612045 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
CBWD1-220ENST00000612045 SOGA1O94964 1423 aa20.18■□□□□ 0.82
CBWD1-220ENST00000612045 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
CBWD1-220ENST00000612045 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
CBWD1-220ENST00000612045 EEA1Q15075 1411 aa20.12■□□□□ 0.81
CBWD1-220ENST00000612045 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
CBWD1-220ENST00000612045 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
CBWD1-220ENST00000612045 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
CBWD1-220ENST00000612045 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
CBWD1-220ENST00000612045 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
CBWD1-220ENST00000612045 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
CBWD1-220ENST00000612045 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
CBWD1-220ENST00000612045 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
CBWD1-220ENST00000612045 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
CBWD1-220ENST00000612045 KIF27Q86VH2 1401 aa19.94■□□□□ 0.78
CBWD1-220ENST00000612045 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
CBWD1-220ENST00000612045 CUX2O14529 1486 aa19.89■□□□□ 0.78
CBWD1-220ENST00000612045 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
CBWD1-220ENST00000612045 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.77
CBWD1-220ENST00000612045 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
CBWD1-220ENST00000612045 KIF21BO75037 1637 aa19.85■□□□□ 0.77
CBWD1-220ENST00000612045 GOLGA3Q08378 1498 aa19.84■□□□□ 0.77
CBWD1-220ENST00000612045 WDR62O43379 1518 aa19.82■□□□□ 0.76
CBWD1-220ENST00000612045 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
CBWD1-220ENST00000612045 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
CBWD1-220ENST00000612045 IGF1RP08069 1367 aa19.78■□□□□ 0.76
CBWD1-220ENST00000612045 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
CBWD1-220ENST00000612045 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
CBWD1-220ENST00000612045 TNIKQ9UKE5 1360 aa19.77■□□□□ 0.76
CBWD1-220ENST00000612045 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
CBWD1-220ENST00000612045 TARBP1Q13395 1621 aaKnown RBP19.76■□□□□ 0.75
CBWD1-220ENST00000612045 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
CBWD1-220ENST00000612045 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
CBWD1-220ENST00000612045 ABCA5Q8WWZ7 1642 aa19.7■□□□□ 0.74
CBWD1-220ENST00000612045 IFT140Q96RY7 1462 aa19.68■□□□□ 0.74
CBWD1-220ENST00000612045 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
CBWD1-220ENST00000612045 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
CBWD1-220ENST00000612045 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
CBWD1-220ENST00000612045 CUL7Q14999 1698 aa19.61■□□□□ 0.73
CBWD1-220ENST00000612045 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.73
CBWD1-220ENST00000612045 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
CBWD1-220ENST00000612045 PBRM1Q86U86 1689 aa19.54■□□□□ 0.72
CBWD1-220ENST00000612045 CLIP1P30622 1438 aa19.53■□□□□ 0.72
CBWD1-220ENST00000612045 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
CBWD1-220ENST00000612045 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
CBWD1-220ENST00000612045 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
CBWD1-220ENST00000612045 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
CBWD1-220ENST00000612045 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
CBWD1-220ENST00000612045 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
CBWD1-220ENST00000612045 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
CBWD1-220ENST00000612045 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
CBWD1-220ENST00000612045 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms