RNA–Protein interactions for RNA: ENST00000611964.1

AL049539.1-201, humanhuman

BASIC

Gene AL049539.1, Length 459 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049539.1-201ENST00000611964 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
AL049539.1-201ENST00000611964 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
AL049539.1-201ENST00000611964 NISCHQ9Y2I1 1504 aa13.29□□□□□ -0.28
AL049539.1-201ENST00000611964 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
AL049539.1-201ENST00000611964 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
AL049539.1-201ENST00000611964 ABCC9O60706 1549 aa12.51□□□□□ -0.41
AL049539.1-201ENST00000611964 FOXD1Q16676 465 aa12.47□□□□□ -0.41
AL049539.1-201ENST00000611964 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
AL049539.1-201ENST00000611964 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
AL049539.1-201ENST00000611964 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
AL049539.1-201ENST00000611964 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
AL049539.1-201ENST00000611964 PPP6R1Q9UPN7 881 aa11.69□□□□□ -0.54
AL049539.1-201ENST00000611964 ADRA2BP18089 450 aa11.63□□□□□ -0.55
AL049539.1-201ENST00000611964 NACADO15069 1562 aa11.62□□□□□ -0.55
AL049539.1-201ENST00000611964 PIAS4Q8N2W9 510 aaPredicted RBP11.61□□□□□ -0.55
AL049539.1-201ENST00000611964 MSH5O43196 834 aa11.58□□□□□ -0.56
AL049539.1-201ENST00000611964 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
AL049539.1-201ENST00000611964 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.57
AL049539.1-201ENST00000611964 UNC13AQ9UPW8 1703 aa11.46□□□□□ -0.57
AL049539.1-201ENST00000611964 BICRAQ9NZM4 1560 aa11.43□□□□□ -0.58
AL049539.1-201ENST00000611964 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
AL049539.1-201ENST00000611964 MYO15BQ96JP2 1530 aa11.36□□□□□ -0.59
AL049539.1-201ENST00000611964 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
AL049539.1-201ENST00000611964 SHROOM4Q9ULL8 1493 aa11.36□□□□□ -0.59
AL049539.1-201ENST00000611964 CC2D2AQ9P2K1 1620 aa11.31□□□□□ -0.6
AL049539.1-201ENST00000611964 DCAF8L2P0C7V8 631 aa11.26□□□□□ -0.61
AL049539.1-201ENST00000611964 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
AL049539.1-201ENST00000611964 CUX2O14529 1486 aa11.07□□□□□ -0.64
AL049539.1-201ENST00000611964 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
AL049539.1-201ENST00000611964 SCRIBQ14160 1630 aa10.97□□□□□ -0.65
AL049539.1-201ENST00000611964 ZCCHC6Q5VYS8 1495 aaKnown RBP10.94□□□□□ -0.66
AL049539.1-201ENST00000611964 ERCC6Q03468 1493 aa10.87□□□□□ -0.67
AL049539.1-201ENST00000611964 TRIM41Q8WV44 630 aa10.73□□□□□ -0.69
AL049539.1-201ENST00000611964 NCAPD3P42695 1498 aa10.72□□□□□ -0.69
AL049539.1-201ENST00000611964 MAPK8IP2Q13387 824 aaPredicted RBP10.71□□□□□ -0.69
AL049539.1-201ENST00000611964 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
AL049539.1-201ENST00000611964 HMGXB3Q12766 1538 aa10.62□□□□□ -0.71
AL049539.1-201ENST00000611964 NESP48681 1621 aa10.6□□□□□ -0.71
AL049539.1-201ENST00000611964 ATAD2BQ9ULI0 1458 aa10.6□□□□□ -0.71
AL049539.1-201ENST00000611964 SMARCA2P51531 1590 aa10.58□□□□□ -0.72
AL049539.1-201ENST00000611964 DMRT2Q9Y5R5 561 aa10.56□□□□□ -0.72
AL049539.1-201ENST00000611964 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
AL049539.1-201ENST00000611964 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
AL049539.1-201ENST00000611964 PDS5BQ9NTI5 1447 aa10.5□□□□□ -0.73
AL049539.1-201ENST00000611964 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
AL049539.1-201ENST00000611964 SMARCA4P51532 1647 aa10.47□□□□□ -0.73
AL049539.1-201ENST00000611964 BAZ1BQ9UIG0 1483 aaKnown RBP10.46□□□□□ -0.74
AL049539.1-201ENST00000611964 BAZ1AQ9NRL2 1556 aaPredicted RBP10.46□□□□□ -0.74
AL049539.1-201ENST00000611964 WDR62O43379 1518 aa10.43□□□□□ -0.74
AL049539.1-201ENST00000611964 MRC2Q9UBG0 1479 aa10.42□□□□□ -0.74
AL049539.1-201ENST00000611964 PEG3Q9GZU2 1588 aa10.42□□□□□ -0.74
AL049539.1-201ENST00000611964 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
AL049539.1-201ENST00000611964 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
AL049539.1-201ENST00000611964 CADPSQ9ULU8 1353 aa10.35□□□□□ -0.75
AL049539.1-201ENST00000611964 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
AL049539.1-201ENST00000611964 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
AL049539.1-201ENST00000611964 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
AL049539.1-201ENST00000611964 CEP164Q9UPV0 1460 aa10.29□□□□□ -0.76
AL049539.1-201ENST00000611964 ARHGEF11O15085 1522 aa10.28□□□□□ -0.76
AL049539.1-201ENST00000611964 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
AL049539.1-201ENST00000611964 MROH2BQ7Z745 1585 aa10.2□□□□□ -0.78
AL049539.1-201ENST00000611964 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
AL049539.1-201ENST00000611964 HOXD11P31277 338 aaPredicted RBP10.17□□□□□ -0.78
AL049539.1-201ENST00000611964 URB2Q14146 1524 aaKnown RBP10.16□□□□□ -0.78
AL049539.1-201ENST00000611964 CYB5RLQ6IPT4 315 aa10.15□□□□□ -0.78
AL049539.1-201ENST00000611964 CNKSR2Q8WXI2 1034 aa10.15□□□□□ -0.78
AL049539.1-201ENST00000611964 CFTRP13569 1480 aa10.15□□□□□ -0.78
AL049539.1-201ENST00000611964 ARAP1Q96P48 1450 aa10.14□□□□□ -0.79
AL049539.1-201ENST00000611964 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
AL049539.1-201ENST00000611964 RSF1Q96T23 1441 aaPredicted RBP10.12□□□□□ -0.79
AL049539.1-201ENST00000611964 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
AL049539.1-201ENST00000611964 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
AL049539.1-201ENST00000611964 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
AL049539.1-201ENST00000611964 EIF4G3O43432 1585 aaKnown RBP10.04□□□□□ -0.8
AL049539.1-201ENST00000611964 WIZO95785 1651 aa10.03□□□□□ -0.8
AL049539.1-201ENST00000611964 CHD1O14646 1710 aa10.02□□□□□ -0.8
AL049539.1-201ENST00000611964 PRDM2Q13029 1718 aa10.02□□□□□ -0.81
AL049539.1-201ENST00000611964 TOPBP1Q92547 1522 aa9.98□□□□□ -0.81
AL049539.1-201ENST00000611964 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
AL049539.1-201ENST00000611964 CACNB1Q02641 598 aaPredicted RBP9.98□□□□□ -0.81
AL049539.1-201ENST00000611964 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
AL049539.1-201ENST00000611964 CLASP1Q7Z460 1538 aa9.95□□□□□ -0.82
AL049539.1-201ENST00000611964 RNF39Q9H2S5 420 aa9.94□□□□□ -0.82
AL049539.1-201ENST00000611964 TARBP1Q13395 1621 aaKnown RBP9.93□□□□□ -0.82
AL049539.1-201ENST00000611964 AQRO60306 1485 aaKnown RBP eCLIP9.92□□□□□ -0.82
AL049539.1-201ENST00000611964 DNMBPQ6XZF7 1577 aa9.92□□□□□ -0.82
AL049539.1-201ENST00000611964 SYNJ1O43426 1573 aa9.9□□□□□ -0.82
AL049539.1-201ENST00000611964 FBLN2P98095 1184 aa9.9□□□□□ -0.82
AL049539.1-201ENST00000611964 NCBP3Q53F19 620 aaKnown RBP9.89□□□□□ -0.83
AL049539.1-201ENST00000611964 WDR97A6NE52 1622 aa9.88□□□□□ -0.83
AL049539.1-201ENST00000611964 ILDR1Q86SU0 546 aaPredicted RBP9.86□□□□□ -0.83
AL049539.1-201ENST00000611964 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
AL049539.1-201ENST00000611964 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
AL049539.1-201ENST00000611964 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
AL049539.1-201ENST00000611964 NPM3O75607 178 aaKnown RBP9.84□□□□□ -0.83
AL049539.1-201ENST00000611964 SNAPC4Q5SXM2 1469 aa9.84□□□□□ -0.83
AL049539.1-201ENST00000611964 SYNJ2O15056 1496 aa9.8□□□□□ -0.84
AL049539.1-201ENST00000611964 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
AL049539.1-201ENST00000611964 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
AL049539.1-201ENST00000611964 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms